RNA–Protein interactions for RNA: ENST00000539413.1

CIT-210, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-210ENST00000539413 RNPEPQ9H4A4 650 aa17.85■□□□□ 0.45
CIT-210ENST00000539413 JPH1Q9HDC5 661 aaPredicted RBP17.85■□□□□ 0.45
CIT-210ENST00000539413 CXXC1Q9P0U4 656 aaPredicted RBP17.85■□□□□ 0.45
CIT-210ENST00000539413 SLC9A2Q9UBY0 812 aa17.85■□□□□ 0.45
CIT-210ENST00000539413 ZNF215Q9UL58 517 aaPredicted RBP17.85■□□□□ 0.45
CIT-210ENST00000539413 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.84■□□□□ 0.45
CIT-210ENST00000539413 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.84■□□□□ 0.45
CIT-210ENST00000539413 CDKL5O76039 1030 aa17.84■□□□□ 0.45
CIT-210ENST00000539413 LARGE1O95461 756 aa17.84■□□□□ 0.45
CIT-210ENST00000539413 CKBP12277 381 aa17.84■□□□□ 0.45
CIT-210ENST00000539413 RFC2P35250 354 aa17.84■□□□□ 0.45
CIT-210ENST00000539413 RBL2Q08999 1139 aa17.84■□□□□ 0.45
CIT-210ENST00000539413 ME3Q16798 604 aa17.84■□□□□ 0.45
CIT-210ENST00000539413 TRIM71Q2Q1W2 868 aaKnown RBP17.84■□□□□ 0.45
CIT-210ENST00000539413 LRRC8DQ7L1W4 858 aa17.84■□□□□ 0.45
CIT-210ENST00000539413 PLA2G4DQ86XP0 818 aa17.84■□□□□ 0.45
CIT-210ENST00000539413 NECAB1Q8N987 351 aa17.84■□□□□ 0.45
CIT-210ENST00000539413 UIMC1Q96RL1 719 aa17.84■□□□□ 0.45
CIT-210ENST00000539413 SDF4Q9BRK5 362 aa17.84■□□□□ 0.45
CIT-210ENST00000539413 PCDHA4Q9UN74 947 aa17.84■□□□□ 0.45
CIT-210ENST00000539413 GRXCR1A8MXD5 290 aa17.83■□□□□ 0.44
CIT-210ENST00000539413 TREHO43280 583 aa17.83■□□□□ 0.44
CIT-210ENST00000539413 CTDNEP1O95476 244 aa17.83■□□□□ 0.44
CIT-210ENST00000539413 PFKMP08237 780 aa17.83■□□□□ 0.44
CIT-210ENST00000539413 SELPP16109 830 aa17.83■□□□□ 0.44
CIT-210ENST00000539413 SERINC5Q86VE9 423 aa17.83■□□□□ 0.44
CIT-210ENST00000539413 ATP6V0A1Q93050 837 aa17.83■□□□□ 0.44
CIT-210ENST00000539413 PCYT2Q99447 389 aa17.83■□□□□ 0.44
CIT-210ENST00000539413 SETD4Q9NVD3 440 aa17.83■□□□□ 0.44
CIT-210ENST00000539413 SCN5AQ14524 2016 aa17.82■□□□□ 0.44
CIT-210ENST00000539413 EMSYQ7Z589 1322 aa17.82■□□□□ 0.44
CIT-210ENST00000539413 STK36Q9NRP7 1315 aa17.82■□□□□ 0.44
CIT-210ENST00000539413 RBAK-RBAKDNI3L0D1 243 aa17.82■□□□□ 0.44
CIT-210ENST00000539413 DDX39AO00148 427 aaKnown RBP17.82■□□□□ 0.44
CIT-210ENST00000539413 EDIL3O43854 480 aa17.82■□□□□ 0.44
CIT-210ENST00000539413 MARK3P27448 753 aa17.82■□□□□ 0.44
CIT-210ENST00000539413 ACTR2P61160 394 aa17.82■□□□□ 0.44
CIT-210ENST00000539413 GPNMBQ14956 572 aa17.82■□□□□ 0.44
CIT-210ENST00000539413 NPY5RQ15761 445 aa17.82■□□□□ 0.44
CIT-210ENST00000539413 ZNF618Q5T7W0 954 aa17.82■□□□□ 0.44
CIT-210ENST00000539413 BLIDQ8IZY5 108 aa17.82■□□□□ 0.44
CIT-210ENST00000539413 GLG1Q92896 1179 aa17.82■□□□□ 0.44
CIT-210ENST00000539413 FAM161BQ96MY7 647 aa17.82■□□□□ 0.44
CIT-210ENST00000539413 MTIF3Q9H2K0 278 aaKnown RBP17.82■□□□□ 0.44
CIT-210ENST00000539413 SMARCAD1Q9H4L7 1026 aa17.82■□□□□ 0.44
CIT-210ENST00000539413 MTMR10Q9NXD2 777 aa17.82■□□□□ 0.44
CIT-210ENST00000539413 ERAP1Q9NZ08 941 aa17.82■□□□□ 0.44
CIT-210ENST00000539413 KCNJ14Q9UNX9 436 aa17.82■□□□□ 0.44
CIT-210ENST00000539413 M0R2N6 131 aa17.81■□□□□ 0.44
CIT-210ENST00000539413 DHX15O43143 795 aaKnown RBP17.81■□□□□ 0.44
CIT-210ENST00000539413 LGR5O75473 907 aa17.81■□□□□ 0.44
CIT-210ENST00000539413 CCNE2O96020 404 aa17.81■□□□□ 0.44
CIT-210ENST00000539413 CIITAP33076 1130 aa17.81■□□□□ 0.44
CIT-210ENST00000539413 ZNF697Q5TEC3 545 aa17.81■□□□□ 0.44
CIT-210ENST00000539413 TRAF7Q6Q0C0 670 aa17.81■□□□□ 0.44
CIT-210ENST00000539413 DAGLBQ8NCG7 672 aa17.81■□□□□ 0.44
CIT-210ENST00000539413 LMBR1Q8WVP7 490 aa17.81■□□□□ 0.44
CIT-210ENST00000539413 GTF3C6Q969F1 213 aa17.81■□□□□ 0.44
CIT-210ENST00000539413 FTOQ9C0B1 505 aaKnown RBP eCLIP17.81■□□□□ 0.44
CIT-210ENST00000539413 GJB4Q9NTQ9 266 aa17.81■□□□□ 0.44
CIT-210ENST00000539413 LAMA2P24043 3122 aaKnown RBP17.81■□□□□ 0.44
CIT-210ENST00000539413 ZBBXA8MT70 800 aa17.8■□□□□ 0.44
CIT-210ENST00000539413 IPO5O00410 1097 aaKnown RBP17.8■□□□□ 0.44
CIT-210ENST00000539413 NBNO60934 754 aa17.8■□□□□ 0.44
CIT-210ENST00000539413 GNAT1P11488 350 aa17.8■□□□□ 0.44
CIT-210ENST00000539413 DNAJB2P25686 324 aa17.8■□□□□ 0.44
CIT-210ENST00000539413 THPOP40225 353 aa17.8■□□□□ 0.44
CIT-210ENST00000539413 PBX2P40425 430 aa17.8■□□□□ 0.44
CIT-210ENST00000539413 ADAM17P78536 824 aa17.8■□□□□ 0.44
CIT-210ENST00000539413 SETQ01105 290 aaPredicted RBP17.8■□□□□ 0.44
CIT-210ENST00000539413 PRR16Q569H4 304 aa17.8■□□□□ 0.44
CIT-210ENST00000539413 FAM177A1Q8N128 213 aaPredicted RBP17.8■□□□□ 0.44
CIT-210ENST00000539413 TBCKQ8TEA7 893 aa17.8■□□□□ 0.44
CIT-210ENST00000539413 LENG9Q96B70 501 aa17.8■□□□□ 0.44
CIT-210ENST00000539413 ZNF577Q9BSK1 485 aa17.8■□□□□ 0.44
CIT-210ENST00000539413 PHF20Q9BVI0 1012 aa17.8■□□□□ 0.44
CIT-210ENST00000539413 ORC3Q9UBD5 711 aaPredicted RBP17.8■□□□□ 0.44
CIT-210ENST00000539413 NRCAMQ92823 1304 aa17.79■□□□□ 0.44
CIT-210ENST00000539413 ATG7O95352 703 aa17.79■□□□□ 0.44
CIT-210ENST00000539413 ACTN1P12814 892 aa17.79■□□□□ 0.44
CIT-210ENST00000539413 FDPSP14324 419 aaKnown RBP17.79■□□□□ 0.44
CIT-210ENST00000539413 PPFIA1Q13136 1202 aa17.79■□□□□ 0.44
CIT-210ENST00000539413 MBTPS1Q14703 1052 aa17.79■□□□□ 0.44
CIT-210ENST00000539413 GALNT17Q6IS24 598 aa17.79■□□□□ 0.44
CIT-210ENST00000539413 KIF2CQ99661 725 aa17.79■□□□□ 0.44
CIT-210ENST00000539413 PBX4Q9BYU1 374 aa17.79■□□□□ 0.44
CIT-210ENST00000539413 TTYH1Q9H313 450 aaPredicted RBP17.79■□□□□ 0.44
CIT-210ENST00000539413 AZI2Q9H6S1 392 aa17.79■□□□□ 0.44
CIT-210ENST00000539413 SLC4A7Q9Y6M7 1214 aa17.79■□□□□ 0.44
CIT-210ENST00000539413 PARNO95453 639 aaKnown RBP17.78■□□□□ 0.44
CIT-210ENST00000539413 CXCL10P02778 98 aa17.78■□□□□ 0.44
CIT-210ENST00000539413 STAT5BP51692 787 aa17.78■□□□□ 0.44
CIT-210ENST00000539413 USP11P51784 963 aa17.78■□□□□ 0.44
CIT-210ENST00000539413 ST3GAL1Q11201 340 aa17.78■□□□□ 0.44
CIT-210ENST00000539413 GRIK4Q16099 956 aa17.78■□□□□ 0.44
CIT-210ENST00000539413 TCTN1Q2MV58 587 aa17.78■□□□□ 0.44
CIT-210ENST00000539413 ABHD15Q6UXT9 468 aa17.78■□□□□ 0.44
CIT-210ENST00000539413 GUCD1Q96NT3 240 aa17.78■□□□□ 0.44
CIT-210ENST00000539413 C22orf23Q9BZE7 217 aa17.78■□□□□ 0.44
CIT-210ENST00000539413 SEMA6BQ9H3T3 888 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms