RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 MAFGO15525 162 aa9.92□□□□□ -0.82
DDB1-212ENST00000538470 RPLP2P05387 115 aaKnown RBP9.92□□□□□ -0.82
DDB1-212ENST00000538470 RXRAP19793 462 aa9.92□□□□□ -0.82
DDB1-212ENST00000538470 TCF7P36402 384 aaPredicted RBP9.92□□□□□ -0.82
DDB1-212ENST00000538470 RCAN1P53805 252 aa9.92□□□□□ -0.82
DDB1-212ENST00000538470 ADAM17P78536 824 aa9.92□□□□□ -0.82
DDB1-212ENST00000538470 HTRA4P83105 476 aaPredicted RBP9.92□□□□□ -0.82
DDB1-212ENST00000538470 ARHGAP4P98171 946 aa9.92□□□□□ -0.82
DDB1-212ENST00000538470 MTMR1Q13613 665 aa9.92□□□□□ -0.82
DDB1-212ENST00000538470 KRT32Q14532 448 aa9.92□□□□□ -0.82
DDB1-212ENST00000538470 SKIV2LQ15477 1246 aaKnown RBP9.92□□□□□ -0.82
DDB1-212ENST00000538470 TCTN1Q2MV58 587 aa9.92□□□□□ -0.82
DDB1-212ENST00000538470 FAM26DQ5JW98 314 aa9.92□□□□□ -0.82
DDB1-212ENST00000538470 TAF2Q6P1X5 1199 aa9.92□□□□□ -0.82
DDB1-212ENST00000538470 RPAINQ86UA6 219 aa9.92□□□□□ -0.82
DDB1-212ENST00000538470 FANCBQ8NB91 859 aa9.92□□□□□ -0.82
DDB1-212ENST00000538470 SP7Q8TDD2 431 aaPredicted RBP9.92□□□□□ -0.82
DDB1-212ENST00000538470 LMBR1Q8WVP7 490 aa9.92□□□□□ -0.82
DDB1-212ENST00000538470 SAMD11Q96NU1 681 aa9.92□□□□□ -0.82
DDB1-212ENST00000538470 UBIAD1Q9Y5Z9 338 aa9.92□□□□□ -0.82
DDB1-212ENST00000538470 TTC3P53804 2025 aa9.91□□□□□ -0.82
DDB1-212ENST00000538470 LINC01553A4QN01 128 aa9.91□□□□□ -0.82
DDB1-212ENST00000538470 RFXAPO00287 272 aa9.91□□□□□ -0.82
DDB1-212ENST00000538470 LPXNO60711 386 aa9.91□□□□□ -0.82
DDB1-212ENST00000538470 CTSHP09668 335 aa9.91□□□□□ -0.82
DDB1-212ENST00000538470 ITGB5P18084 799 aa9.91□□□□□ -0.82
DDB1-212ENST00000538470 SP4Q02446 784 aa9.91□□□□□ -0.82
DDB1-212ENST00000538470 RTN1Q16799 776 aa9.91□□□□□ -0.82
DDB1-212ENST00000538470 TSGA10IPQ3SY00 556 aa9.91□□□□□ -0.82
DDB1-212ENST00000538470 UTP14CQ5TAP6 766 aaKnown RBP9.91□□□□□ -0.82
DDB1-212ENST00000538470 HEATR3Q7Z4Q2 680 aa9.91□□□□□ -0.82
DDB1-212ENST00000538470 TMCO2Q7Z6W1 182 aaPredicted RBP9.91□□□□□ -0.82
DDB1-212ENST00000538470 RSPH3Q86UC2 560 aa9.91□□□□□ -0.82
DDB1-212ENST00000538470 MYOCDQ8IZQ8 938 aa9.91□□□□□ -0.82
DDB1-212ENST00000538470 DBF4BQ8NFT6 615 aa9.91□□□□□ -0.82
DDB1-212ENST00000538470 GDPD5Q8WTR4 605 aa9.91□□□□□ -0.82
DDB1-212ENST00000538470 SEPT1Q8WYJ6 367 aa9.91□□□□□ -0.82
DDB1-212ENST00000538470 NEK1Q96PY6 1258 aa9.91□□□□□ -0.82
DDB1-212ENST00000538470 GLT8D2Q9H1C3 349 aa9.91□□□□□ -0.82
DDB1-212ENST00000538470 BCAS3Q9H6U6 928 aa9.91□□□□□ -0.82
DDB1-212ENST00000538470 SETD4Q9NVD3 440 aa9.91□□□□□ -0.82
DDB1-212ENST00000538470 ERAP1Q9NZ08 941 aa9.91□□□□□ -0.82
DDB1-212ENST00000538470 PCDHA6Q9UN73 950 aa9.91□□□□□ -0.82
DDB1-212ENST00000538470 PCDHA8Q9Y5H6 950 aa9.91□□□□□ -0.82
DDB1-212ENST00000538470 MYH9P35579 1960 aaKnown RBP9.91□□□□□ -0.82
DDB1-212ENST00000538470 WDR81Q562E7 1941 aa9.91□□□□□ -0.82
DDB1-212ENST00000538470 NFASCO94856 1347 aa9.9□□□□□ -0.82
DDB1-212ENST00000538470 ZBTB43O43298 467 aa9.9□□□□□ -0.82
DDB1-212ENST00000538470 CDC45O75419 566 aa9.9□□□□□ -0.82
DDB1-212ENST00000538470 FOSP01100 380 aaPredicted RBP9.9□□□□□ -0.82
DDB1-212ENST00000538470 CENPBP07199 599 aaPredicted RBP9.9□□□□□ -0.82
DDB1-212ENST00000538470 HMGB1P09429 215 aaKnown RBP9.9□□□□□ -0.82
DDB1-212ENST00000538470 NAPAP54920 295 aa9.9□□□□□ -0.82
DDB1-212ENST00000538470 PPFIA1Q13136 1202 aa9.9□□□□□ -0.82
DDB1-212ENST00000538470 AP3B2Q13367 1082 aa9.9□□□□□ -0.82
DDB1-212ENST00000538470 COL9A3Q14050 684 aaPredicted RBP9.9□□□□□ -0.82
DDB1-212ENST00000538470 UBE2SQ16763 222 aa9.9□□□□□ -0.82
DDB1-212ENST00000538470 WWC2Q6AWC2 1192 aa9.9□□□□□ -0.82
DDB1-212ENST00000538470 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.9□□□□□ -0.82
DDB1-212ENST00000538470 DHX32Q7L7V1 743 aaKnown RBP9.9□□□□□ -0.82
DDB1-212ENST00000538470 SPRED2Q7Z698 418 aa9.9□□□□□ -0.82
DDB1-212ENST00000538470 RAB11FIP4Q86YS3 637 aa9.9□□□□□ -0.82
DDB1-212ENST00000538470 CMTR1Q8N1G2 835 aaKnown RBP9.9□□□□□ -0.82
DDB1-212ENST00000538470 TNPO1Q92973 898 aaKnown RBP9.9□□□□□ -0.82
DDB1-212ENST00000538470 LRRC2Q9BYS8 371 aa9.9□□□□□ -0.82
DDB1-212ENST00000538470 IFIH1Q9BYX4 1025 aaKnown RBP9.9□□□□□ -0.82
DDB1-212ENST00000538470 SMARCAD1Q9H4L7 1026 aa9.9□□□□□ -0.82
DDB1-212ENST00000538470 JPH1Q9HDC5 661 aaPredicted RBP9.9□□□□□ -0.82
DDB1-212ENST00000538470 RIC8AQ9NPQ8 531 aa9.9□□□□□ -0.82
DDB1-212ENST00000538470 JADE2Q9NQC1 790 aa9.9□□□□□ -0.82
DDB1-212ENST00000538470 TUBE1Q9UJT0 475 aa9.9□□□□□ -0.82
DDB1-212ENST00000538470 KIAA1671Q9BY89 1806 aa9.9□□□□□ -0.82
DDB1-212ENST00000538470 NID2Q14112 1375 aa9.89□□□□□ -0.83
DDB1-212ENST00000538470 XIRP2A4UGR9 3374 aa9.89□□□□□ -0.83
DDB1-212ENST00000538470 MBLAC1A4D2B0 266 aaPredicted RBP9.89□□□□□ -0.83
DDB1-212ENST00000538470 RRN3P2A6NIE6 340 aa9.89□□□□□ -0.83
DDB1-212ENST00000538470 ATP9AO75110 1047 aa9.89□□□□□ -0.83
DDB1-212ENST00000538470 BMP1P13497 986 aa9.89□□□□□ -0.83
DDB1-212ENST00000538470 ADCY7P51828 1080 aa9.89□□□□□ -0.83
DDB1-212ENST00000538470 MGAT3Q09327 533 aa9.89□□□□□ -0.83
DDB1-212ENST00000538470 GRIK4Q16099 956 aa9.89□□□□□ -0.83
DDB1-212ENST00000538470 PTPROQ16827 1216 aa9.89□□□□□ -0.83
DDB1-212ENST00000538470 TIGD5Q53EQ6 642 aa9.89□□□□□ -0.83
DDB1-212ENST00000538470 KRT40Q6A162 431 aa9.89□□□□□ -0.83
DDB1-212ENST00000538470 CCDC82Q8N4S0 544 aa9.89□□□□□ -0.83
DDB1-212ENST00000538470 FBXO22Q8NEZ5 403 aa9.89□□□□□ -0.83
DDB1-212ENST00000538470 GLG1Q92896 1179 aa9.89□□□□□ -0.83
DDB1-212ENST00000538470 HLA-CQ95604 372 aa9.89□□□□□ -0.83
DDB1-212ENST00000538470 TOP1MTQ969P6 601 aa9.89□□□□□ -0.83
DDB1-212ENST00000538470 YME1L1Q96TA2 773 aa9.89□□□□□ -0.83
DDB1-212ENST00000538470 SDF4Q9BRK5 362 aa9.89□□□□□ -0.83
DDB1-212ENST00000538470 SUGCTQ9HAC7 445 aa9.89□□□□□ -0.83
DDB1-212ENST00000538470 BARHL2Q9NY43 387 aa9.89□□□□□ -0.83
DDB1-212ENST00000538470 TELO2Q9Y4R8 837 aa9.89□□□□□ -0.83
DDB1-212ENST00000538470 CCDC196A0A1B0GTZ2 297 aa9.88□□□□□ -0.83
DDB1-212ENST00000538470 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.88□□□□□ -0.83
DDB1-212ENST00000538470 GSTTP1A0A1W2PQM5 241 aa9.88□□□□□ -0.83
DDB1-212ENST00000538470 hCG_1642624A0A1W2PR95 340 aa9.88□□□□□ -0.83
DDB1-212ENST00000538470 GOLGA8AA7E2F4 631 aa9.88□□□□□ -0.83
DDB1-212ENST00000538470 GOLGA8BA8MQT2 603 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms