RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 TLK1Q9UKI8 766 aa18.18■□□□□ 0.5
SCARB1-205ENST00000538291 FAN1Q9Y2M0 1017 aa18.18■□□□□ 0.5
SCARB1-205ENST00000538291 ATP7BP35670 1465 aa18.18■□□□□ 0.5
SCARB1-205ENST00000538291 RPAP1Q9BWH6 1393 aaPredicted RBP18.18■□□□□ 0.5
SCARB1-205ENST00000538291 MYO3BQ8WXR4 1341 aa18.18■□□□□ 0.5
SCARB1-205ENST00000538291 GFPT2O94808 682 aa18.18■□□□□ 0.5
SCARB1-205ENST00000538291 BAG2O95816 211 aa18.18■□□□□ 0.5
SCARB1-205ENST00000538291 GNAT1P11488 350 aa18.18■□□□□ 0.5
SCARB1-205ENST00000538291 NR5A1Q13285 461 aa18.18■□□□□ 0.5
SCARB1-205ENST00000538291 RASGRF1Q13972 1273 aa18.18■□□□□ 0.5
SCARB1-205ENST00000538291 GDAP1Q8TB36 358 aa18.18■□□□□ 0.5
SCARB1-205ENST00000538291 MYO5CQ9NQX4 1742 aa18.18■□□□□ 0.5
SCARB1-205ENST00000538291 IKBKBO14920 756 aa18.18■□□□□ 0.5
SCARB1-205ENST00000538291 HIP1RO75146 1068 aa18.18■□□□□ 0.5
SCARB1-205ENST00000538291 MYL3P08590 195 aa18.18■□□□□ 0.5
SCARB1-205ENST00000538291 MARK3P27448 753 aa18.18■□□□□ 0.5
SCARB1-205ENST00000538291 HOXA13P31271 388 aaPredicted RBP18.18■□□□□ 0.5
SCARB1-205ENST00000538291 NFX1Q12986 1120 aaKnown RBP18.18■□□□□ 0.5
SCARB1-205ENST00000538291 SMYD4Q8IYR2 804 aaPredicted RBP18.18■□□□□ 0.5
SCARB1-205ENST00000538291 USP6P35125 1406 aa18.17■□□□□ 0.5
SCARB1-205ENST00000538291 TARBP1Q13395 1621 aaKnown RBP18.17■□□□□ 0.5
SCARB1-205ENST00000538291 DYNLT1P63172 113 aa18.17■□□□□ 0.5
SCARB1-205ENST00000538291 CAPS2Q9BXY5 557 aa18.17■□□□□ 0.5
SCARB1-205ENST00000538291 CASP2P42575 452 aa18.17■□□□□ 0.5
SCARB1-205ENST00000538291 JAK3P52333 1124 aa18.17■□□□□ 0.5
SCARB1-205ENST00000538291 PTPN12Q05209 780 aaKnown RBP18.17■□□□□ 0.5
SCARB1-205ENST00000538291 CCHCR1Q8TD31 782 aa18.17■□□□□ 0.5
SCARB1-205ENST00000538291 HSPA6P17066 643 aa18.17■□□□□ 0.5
SCARB1-205ENST00000538291 CCNE1P24864 410 aa18.17■□□□□ 0.5
SCARB1-205ENST00000538291 LIFRP42702 1097 aa18.17■□□□□ 0.5
SCARB1-205ENST00000538291 COG7P83436 770 aa18.17■□□□□ 0.5
SCARB1-205ENST00000538291 DCAF4Q8WV16 495 aa18.17■□□□□ 0.5
SCARB1-205ENST00000538291 CYP2D7A0A087X1C5 515 aa18.17■□□□□ 0.5
SCARB1-205ENST00000538291 PGRMC1O00264 195 aaKnown RBP18.17■□□□□ 0.5
SCARB1-205ENST00000538291 DGKHQ86XP1 1220 aa18.17■□□□□ 0.5
SCARB1-205ENST00000538291 SPATS2Q86XZ4 545 aaKnown RBP18.17■□□□□ 0.5
SCARB1-205ENST00000538291 IRAK4Q9NWZ3 460 aa18.17■□□□□ 0.5
SCARB1-205ENST00000538291 MAGI2Q86UL8 1455 aa18.16■□□□□ 0.5
SCARB1-205ENST00000538291 GH2P01242 217 aa18.16■□□□□ 0.5
SCARB1-205ENST00000538291 CIITAP33076 1130 aa18.16■□□□□ 0.5
SCARB1-205ENST00000538291 MSH2P43246 934 aa18.16■□□□□ 0.5
SCARB1-205ENST00000538291 AP3B2Q13367 1082 aa18.16■□□□□ 0.5
SCARB1-205ENST00000538291 SNX1Q13596 522 aa18.16■□□□□ 0.5
SCARB1-205ENST00000538291 FAM133AQ8N9E0 248 aa18.16■□□□□ 0.5
SCARB1-205ENST00000538291 FAM167AQ96KS9 214 aa18.16■□□□□ 0.5
SCARB1-205ENST00000538291 NUDCD1Q96RS6 583 aa18.16■□□□□ 0.5
SCARB1-205ENST00000538291 HOXC10Q9NYD6 342 aa18.16■□□□□ 0.5
SCARB1-205ENST00000538291 RWDD2AQ9UIY3 292 aa18.16■□□□□ 0.5
SCARB1-205ENST00000538291 FNDC3AQ9Y2H6 1198 aaKnown RBP18.16■□□□□ 0.5
SCARB1-205ENST00000538291 CLGNO14967 610 aa18.16■□□□□ 0.5
SCARB1-205ENST00000538291 LDHAP00338 332 aaKnown RBP18.16■□□□□ 0.5
SCARB1-205ENST00000538291 BASP1P80723 227 aaKnown RBP18.16■□□□□ 0.5
SCARB1-205ENST00000538291 SLITRK6Q9H5Y7 841 aa18.16■□□□□ 0.5
SCARB1-205ENST00000538291 GANCQ8TET4 914 aa18.16■□□□□ 0.5
SCARB1-205ENST00000538291 MED4Q9NPJ6 270 aa18.16■□□□□ 0.5
SCARB1-205ENST00000538291 CDC23Q9UJX2 597 aa18.16■□□□□ 0.5
SCARB1-205ENST00000538291 PLCG1P19174 1290 aa18.16■□□□□ 0.5
SCARB1-205ENST00000538291 C1orf228Q6PIY5 440 aa18.16■□□□□ 0.5
SCARB1-205ENST00000538291 KSR1Q8IVT5 923 aa18.16■□□□□ 0.5
SCARB1-205ENST00000538291 TTLL11Q8NHH1 800 aa18.16■□□□□ 0.5
SCARB1-205ENST00000538291 PIH1D3Q9NQM4 214 aaKnown RBP18.16■□□□□ 0.5
SCARB1-205ENST00000538291 UGGT1Q9NYU2 1555 aa18.16■□□□□ 0.5
SCARB1-205ENST00000538291 LRRD1A4D1F6 860 aa18.15■□□□□ 0.5
SCARB1-205ENST00000538291 CTTNQ14247 550 aaKnown RBP18.15■□□□□ 0.5
SCARB1-205ENST00000538291 C10orf76Q5T2E6 689 aa18.15■□□□□ 0.5
SCARB1-205ENST00000538291 NDUFAF2Q8N183 169 aa18.15■□□□□ 0.5
SCARB1-205ENST00000538291 GIMAP8Q8ND71 665 aaPredicted RBP18.15■□□□□ 0.5
SCARB1-205ENST00000538291 RBL2Q08999 1139 aa18.15■□□□□ 0.5
SCARB1-205ENST00000538291 SCARA5Q6ZMJ2 495 aa18.15■□□□□ 0.5
SCARB1-205ENST00000538291 SLC35F6Q8N357 371 aa18.15■□□□□ 0.5
SCARB1-205ENST00000538291 LINC00301Q8NCQ3 95 aa18.15■□□□□ 0.5
SCARB1-205ENST00000538291 UBN2Q6ZU65 1347 aa18.15■□□□□ 0.5
SCARB1-205ENST00000538291 STXBP2Q15833 593 aa18.15■□□□□ 0.5
SCARB1-205ENST00000538291 PPP4R3CPQ6ZMV5 832 aa18.15■□□□□ 0.5
SCARB1-205ENST00000538291 OR6B3Q8NGW1 331 aa18.15■□□□□ 0.5
SCARB1-205ENST00000538291 BRIP1Q9BX63 1249 aa18.15■□□□□ 0.5
SCARB1-205ENST00000538291 THAP9Q9H5L6 903 aa18.15■□□□□ 0.5
SCARB1-205ENST00000538291 MAN1B1Q9UKM7 699 aa18.15■□□□□ 0.5
SCARB1-205ENST00000538291 PPARGP37231 505 aaPredicted RBP18.15■□□□□ 0.5
SCARB1-205ENST00000538291 CRKP46108 304 aa18.15■□□□□ 0.5
SCARB1-205ENST00000538291 TACO1Q9BSH4 297 aaKnown RBP18.15■□□□□ 0.5
SCARB1-205ENST00000538291 INTS9Q9NV88 658 aaKnown RBP18.15■□□□□ 0.5
SCARB1-205ENST00000538291 SRPRBQ9Y5M8 271 aaKnown RBP18.15■□□□□ 0.5
SCARB1-205ENST00000538291 KDM5DQ9BY66 1539 aa18.14■□□□□ 0.5
SCARB1-205ENST00000538291 CDC25AP30304 524 aa18.14■□□□□ 0.49
SCARB1-205ENST00000538291 THEM5Q8N1Q8 247 aa18.14■□□□□ 0.49
SCARB1-205ENST00000538291 PDZD8Q8NEN9 1154 aa18.14■□□□□ 0.49
SCARB1-205ENST00000538291 MAGED2Q9UNF1 606 aaPredicted RBP18.14■□□□□ 0.49
SCARB1-205ENST00000538291 CYP4F22Q6NT55 531 aa18.14■□□□□ 0.49
SCARB1-205ENST00000538291 TDRD7Q8NHU6 1098 aaKnown RBP18.14■□□□□ 0.49
SCARB1-205ENST00000538291 PKP1Q13835 747 aa18.14■□□□□ 0.49
SCARB1-205ENST00000538291 ARL6IP4Q66PJ3 421 aaKnown RBP18.14■□□□□ 0.49
SCARB1-205ENST00000538291 TMED8Q6PL24 325 aaPredicted RBP18.14■□□□□ 0.49
SCARB1-205ENST00000538291 SMAP1Q8IYB5 467 aaPredicted RBP18.14■□□□□ 0.49
SCARB1-205ENST00000538291 GPR101Q96P66 508 aaPredicted RBP18.14■□□□□ 0.49
SCARB1-205ENST00000538291 TOPORSQ9NS56 1045 aaPredicted RBP18.14■□□□□ 0.49
SCARB1-205ENST00000538291 DONSONQ9NYP3 566 aa18.14■□□□□ 0.49
SCARB1-205ENST00000538291 ARAP3Q8WWN8 1544 aa18.14■□□□□ 0.49
SCARB1-205ENST00000538291 BNIP3LO60238 219 aa18.14■□□□□ 0.49
SCARB1-205ENST00000538291 SUN1O94901 812 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms