RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 ASXL2Q76L83 1435 aa8.37□□□□□ -1.07
CCDC7-208ENST00000537047 PABPC1P11940 636 aaKnown RBP8.37□□□□□ -1.07
CCDC7-208ENST00000537047 FAHP16930 419 aa8.37□□□□□ -1.07
CCDC7-208ENST00000537047 STPG3Q8N7X2 389 aa8.37□□□□□ -1.07
CCDC7-208ENST00000537047 UHMK1Q8TAS1 419 aaKnown RBP8.37□□□□□ -1.07
CCDC7-208ENST00000537047 WRNIP1Q96S55 665 aa8.37□□□□□ -1.07
CCDC7-208ENST00000537047 BARX1Q9HBU1 254 aaPredicted RBP8.37□□□□□ -1.07
CCDC7-208ENST00000537047 SRRDQ9UH36 339 aa8.37□□□□□ -1.07
CCDC7-208ENST00000537047 ZFP69BQ9UJL9 534 aa8.37□□□□□ -1.07
CCDC7-208ENST00000537047 ADAM29Q9UKF5 820 aa8.37□□□□□ -1.07
CCDC7-208ENST00000537047 KNG1P01042 644 aa8.36□□□□□ -1.07
CCDC7-208ENST00000537047 GNAT1P11488 350 aa8.36□□□□□ -1.07
CCDC7-208ENST00000537047 C6P13671 934 aa8.36□□□□□ -1.07
CCDC7-208ENST00000537047 RSPO2Q6UXX9 243 aaPredicted RBP8.36□□□□□ -1.07
CCDC7-208ENST00000537047 DCAF4Q8WV16 495 aa8.36□□□□□ -1.07
CCDC7-208ENST00000537047 PTPN22Q9Y2R2 807 aa8.36□□□□□ -1.07
CCDC7-208ENST00000537047 CNOT4O95628 575 aaKnown RBP8.35□□□□□ -1.07
CCDC7-208ENST00000537047 IL18BPO95998 194 aa8.35□□□□□ -1.07
CCDC7-208ENST00000537047 PFKPQ01813 784 aa8.35□□□□□ -1.07
CCDC7-208ENST00000537047 SMAD2Q15796 467 aaKnown RBP8.35□□□□□ -1.07
CCDC7-208ENST00000537047 HABP4Q5JVS0 413 aaKnown RBP8.35□□□□□ -1.07
CCDC7-208ENST00000537047 CD276Q5ZPR3 534 aa8.35□□□□□ -1.07
CCDC7-208ENST00000537047 NSMFQ6X4W1 530 aa8.35□□□□□ -1.07
CCDC7-208ENST00000537047 Q6ZUG5 572 aa8.35□□□□□ -1.07
CCDC7-208ENST00000537047 GNRHR2Q96P88 292 aa8.35□□□□□ -1.07
CCDC7-208ENST00000537047 SORCS2Q96PQ0 1159 aa8.35□□□□□ -1.07
CCDC7-208ENST00000537047 PATE3B3GLJ2 98 aa8.34□□□□□ -1.07
CCDC7-208ENST00000537047 ACOT7O00154 380 aa8.34□□□□□ -1.07
CCDC7-208ENST00000537047 FGFR1P11362 822 aa8.34□□□□□ -1.07
CCDC7-208ENST00000537047 KIZQ2M2Z5 673 aa8.34□□□□□ -1.07
CCDC7-208ENST00000537047 SLFN13Q68D06 897 aa8.34□□□□□ -1.07
CCDC7-208ENST00000537047 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.34□□□□□ -1.07
CCDC7-208ENST00000537047 SGSM3Q96HU1 749 aa8.34□□□□□ -1.07
CCDC7-208ENST00000537047 CD244Q9BZW8 370 aa8.34□□□□□ -1.07
CCDC7-208ENST00000537047 DEF6Q9H4E7 631 aa8.34□□□□□ -1.07
CCDC7-208ENST00000537047 IPPKQ9H8X2 491 aa8.34□□□□□ -1.07
CCDC7-208ENST00000537047 KCND1Q9NSA2 647 aa8.34□□□□□ -1.07
CCDC7-208ENST00000537047 ARHGAP20Q9P2F6 1191 aa8.34□□□□□ -1.07
CCDC7-208ENST00000537047 DSEQ9UL01 958 aa8.34□□□□□ -1.07
CCDC7-208ENST00000537047 TRAF6Q9Y4K3 522 aa8.34□□□□□ -1.07
CCDC7-208ENST00000537047 TCRBV5S4A2TA0A5A2 114 aa8.33□□□□□ -1.08
CCDC7-208ENST00000537047 SOD2P04179 222 aa8.33□□□□□ -1.08
CCDC7-208ENST00000537047 TACR2P21452 398 aa8.33□□□□□ -1.08
CCDC7-208ENST00000537047 GPR85P60893 370 aa8.33□□□□□ -1.08
CCDC7-208ENST00000537047 R3HDM1Q15032 1099 aaKnown RBP8.33□□□□□ -1.08
CCDC7-208ENST00000537047 STYK1Q6J9G0 422 aa8.33□□□□□ -1.08
CCDC7-208ENST00000537047 SH3RF2Q8TEC5 729 aa8.33□□□□□ -1.08
CCDC7-208ENST00000537047 TACO1Q9BSH4 297 aaKnown RBP8.33□□□□□ -1.08
CCDC7-208ENST00000537047 SUV39H1O43463 412 aa8.32□□□□□ -1.08
CCDC7-208ENST00000537047 FBXO21O94952 628 aa8.32□□□□□ -1.08
CCDC7-208ENST00000537047 CSF2RBP32927 897 aa8.32□□□□□ -1.08
CCDC7-208ENST00000537047 SPIRE1Q08AE8 756 aa8.32□□□□□ -1.08
CCDC7-208ENST00000537047 Q8TCH9 128 aa8.32□□□□□ -1.08
CCDC7-208ENST00000537047 SLC39A2Q9NP94 309 aa8.32□□□□□ -1.08
CCDC7-208ENST00000537047 ZNF623O75123 536 aa8.31□□□□□ -1.08
CCDC7-208ENST00000537047 AMHP03971 560 aa8.31□□□□□ -1.08
CCDC7-208ENST00000537047 ZNF888P0CJ79 500 aaPredicted RBP8.31□□□□□ -1.08
CCDC7-208ENST00000537047 SPDYAQ5MJ70 313 aa8.31□□□□□ -1.08
CCDC7-208ENST00000537047 CRIP3Q6Q6R5 217 aa8.31□□□□□ -1.08
CCDC7-208ENST00000537047 KCTD1Q719H9 257 aa8.31□□□□□ -1.08
CCDC7-208ENST00000537047 RALYLQ86SE5 291 aaKnown RBP8.31□□□□□ -1.08
CCDC7-208ENST00000537047 IFNL3Q8IZI9 196 aa8.31□□□□□ -1.08
CCDC7-208ENST00000537047 ZNF747Q9BV97 191 aa8.31□□□□□ -1.08
CCDC7-208ENST00000537047 ZNF839A8K0R7 811 aa8.3□□□□□ -1.08
CCDC7-208ENST00000537047 FOXS1O43638 330 aa8.3□□□□□ -1.08
CCDC7-208ENST00000537047 SLPIP03973 132 aa8.3□□□□□ -1.08
CCDC7-208ENST00000537047 ENO2P09104 434 aaPredicted RBP8.3□□□□□ -1.08
CCDC7-208ENST00000537047 ZFPM1Q8IX07 1006 aa8.3□□□□□ -1.08
CCDC7-208ENST00000537047 AJUBAQ96IF1 538 aa8.3□□□□□ -1.08
CCDC7-208ENST00000537047 LRRC37BQ96QE4 947 aa8.3□□□□□ -1.08
CCDC7-208ENST00000537047 GMLQ99445 158 aa8.3□□□□□ -1.08
CCDC7-208ENST00000537047 TRAV20A0A0B4J274 112 aa8.29□□□□□ -1.08
CCDC7-208ENST00000537047 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.29□□□□□ -1.08
CCDC7-208ENST00000537047 ACVRL1P37023 503 aa8.29□□□□□ -1.08
CCDC7-208ENST00000537047 GDF5P43026 501 aa8.29□□□□□ -1.08
CCDC7-208ENST00000537047 EPHA5P54756 1037 aa8.29□□□□□ -1.08
CCDC7-208ENST00000537047 IFRD2Q12894 506 aaPredicted RBP8.29□□□□□ -1.08
CCDC7-208ENST00000537047 RAB33AQ14088 237 aa8.29□□□□□ -1.08
CCDC7-208ENST00000537047 SPATC1Q76KD6 591 aa8.29□□□□□ -1.08
CCDC7-208ENST00000537047 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.29□□□□□ -1.08
CCDC7-208ENST00000537047 ZFYVE21Q9BQ24 234 aa8.29□□□□□ -1.08
CCDC7-208ENST00000537047 PDGFDQ9GZP0 370 aaPredicted RBP8.29□□□□□ -1.08
CCDC7-208ENST00000537047 IQCA1LA6NCM1 817 aa8.28□□□□□ -1.08
CCDC7-208ENST00000537047 FAM47E-STBD1D6RA91 191 aa8.28□□□□□ -1.08
CCDC7-208ENST00000537047 SELENOPP49908 381 aa8.28□□□□□ -1.08
CCDC7-208ENST00000537047 TCTN3Q6NUS6 607 aa8.28□□□□□ -1.08
CCDC7-208ENST00000537047 SLC43A3Q8NBI5 491 aa8.28□□□□□ -1.08
CCDC7-208ENST00000537047 ST13P5Q8NFI4 369 aaPredicted RBP8.28□□□□□ -1.08
CCDC7-208ENST00000537047 CDK5RAP1Q96SZ6 601 aaKnown RBP8.28□□□□□ -1.08
CCDC7-208ENST00000537047 VPS11Q9H270 941 aa8.28□□□□□ -1.08
CCDC7-208ENST00000537047 SLC4A7Q9Y6M7 1214 aa8.28□□□□□ -1.08
CCDC7-208ENST00000537047 FAM90A27PA6NNH2 459 aa8.27□□□□□ -1.09
CCDC7-208ENST00000537047 CHGBP05060 677 aa8.27□□□□□ -1.09
CCDC7-208ENST00000537047 LMF1Q96S06 567 aa8.27□□□□□ -1.09
CCDC7-208ENST00000537047 KATNBL1Q9H079 304 aa8.27□□□□□ -1.09
CCDC7-208ENST00000537047 TCAF1Q9Y4C2 921 aa8.27□□□□□ -1.09
CCDC7-208ENST00000537047 H0Y858 1186 aa8.26□□□□□ -1.09
CCDC7-208ENST00000537047 MUSKO15146 869 aa8.26□□□□□ -1.09
CCDC7-208ENST00000537047 HMGA2P52926 109 aa8.26□□□□□ -1.09
CCDC7-208ENST00000537047 NOLC1Q14978 699 aaKnown RBP eCLIP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms