RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 RIC8BQ9NVN3 520 aa7.24□□□□□ -1.25
PRKDC-208ENST00000536710 NUDT5Q9UKK9 219 aa7.24□□□□□ -1.25
PRKDC-208ENST00000536710 PCDHB4Q9Y5E5 795 aa7.24□□□□□ -1.25
PRKDC-208ENST00000536710 DVL2O14641 736 aa7.23□□□□□ -1.25
PRKDC-208ENST00000536710 GABRDO14764 452 aa7.23□□□□□ -1.25
PRKDC-208ENST00000536710 TGM5O43548 720 aa7.23□□□□□ -1.25
PRKDC-208ENST00000536710 CLASP2O75122 1294 aaKnown RBP7.23□□□□□ -1.25
PRKDC-208ENST00000536710 LTFP02788 710 aa7.23□□□□□ -1.25
PRKDC-208ENST00000536710 MYBL2P10244 700 aa7.23□□□□□ -1.25
PRKDC-208ENST00000536710 PNLIPP16233 465 aa7.23□□□□□ -1.25
PRKDC-208ENST00000536710 ITGB7P26010 798 aa7.23□□□□□ -1.25
PRKDC-208ENST00000536710 LSP1P33241 339 aa7.23□□□□□ -1.25
PRKDC-208ENST00000536710 SLC6A11P48066 632 aa7.23□□□□□ -1.25
PRKDC-208ENST00000536710 TUSC3Q13454 348 aa7.23□□□□□ -1.25
PRKDC-208ENST00000536710 EMC4Q5J8M3 183 aa7.23□□□□□ -1.25
PRKDC-208ENST00000536710 BTBD8Q5XKL5 378 aa7.23□□□□□ -1.25
PRKDC-208ENST00000536710 CYP4F22Q6NT55 531 aa7.23□□□□□ -1.25
PRKDC-208ENST00000536710 MILR1Q7Z6M3 343 aa7.23□□□□□ -1.25
PRKDC-208ENST00000536710 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.23□□□□□ -1.25
PRKDC-208ENST00000536710 RC3H2Q9HBD1 1191 aaKnown RBP7.23□□□□□ -1.25
PRKDC-208ENST00000536710 KCNH7Q9NS40 1196 aa7.23□□□□□ -1.25
PRKDC-208ENST00000536710 PALD1Q9ULE6 856 aa7.23□□□□□ -1.25
PRKDC-208ENST00000536710 NOC2LQ9Y3T9 749 aaKnown RBP7.23□□□□□ -1.25
PRKDC-208ENST00000536710 WASHC2AQ641Q2 1341 aa7.23□□□□□ -1.25
PRKDC-208ENST00000536710 ZC3H12DA2A288 527 aaKnown RBP7.22□□□□□ -1.25
PRKDC-208ENST00000536710 PRAMEF25A6NGN4 478 aa7.22□□□□□ -1.25
PRKDC-208ENST00000536710 F8W031 263 aaPredicted RBP7.22□□□□□ -1.25
PRKDC-208ENST00000536710 MT-CO1P00395 513 aa7.22□□□□□ -1.25
PRKDC-208ENST00000536710 PTPN1P18031 435 aaKnown RBP7.22□□□□□ -1.25
PRKDC-208ENST00000536710 SDHBP21912 280 aa7.22□□□□□ -1.25
PRKDC-208ENST00000536710 PTX3P26022 381 aaPredicted RBP7.22□□□□□ -1.25
PRKDC-208ENST00000536710 GRIN1Q05586 938 aa7.22□□□□□ -1.25
PRKDC-208ENST00000536710 MCL1Q07820 350 aa7.22□□□□□ -1.25
PRKDC-208ENST00000536710 SNX17Q15036 470 aa7.22□□□□□ -1.25
PRKDC-208ENST00000536710 PPP2R5AQ15172 486 aa7.22□□□□□ -1.25
PRKDC-208ENST00000536710 PTPN21Q16825 1174 aa7.22□□□□□ -1.25
PRKDC-208ENST00000536710 ZNF792Q3KQV3 632 aa7.22□□□□□ -1.25
PRKDC-208ENST00000536710 RGL3Q3MIN7 710 aa7.22□□□□□ -1.25
PRKDC-208ENST00000536710 WDR75Q8IWA0 830 aaKnown RBP7.22□□□□□ -1.25
PRKDC-208ENST00000536710 TRIM48Q8IWZ4 208 aa7.22□□□□□ -1.25
PRKDC-208ENST00000536710 ABHD4Q8TB40 342 aa7.22□□□□□ -1.25
PRKDC-208ENST00000536710 PHOSPHO1Q8TCT1 267 aa7.22□□□□□ -1.25
PRKDC-208ENST00000536710 PEX11GQ96HA9 241 aa7.22□□□□□ -1.25
PRKDC-208ENST00000536710 ACSS2Q9NR19 701 aa7.22□□□□□ -1.25
PRKDC-208ENST00000536710 C14orf119Q9NWQ9 140 aa7.22□□□□□ -1.25
PRKDC-208ENST00000536710 CTNND2Q9UQB3 1225 aa7.22□□□□□ -1.25
PRKDC-208ENST00000536710 B3GALT1Q9Y5Z6 326 aa7.22□□□□□ -1.25
PRKDC-208ENST00000536710 NUDT19A8MXV4 375 aa7.21□□□□□ -1.26
PRKDC-208ENST00000536710 SGSM2O43147 1006 aa7.21□□□□□ -1.26
PRKDC-208ENST00000536710 TADA3O75528 432 aa7.21□□□□□ -1.26
PRKDC-208ENST00000536710 FBXO21O94952 628 aa7.21□□□□□ -1.26
PRKDC-208ENST00000536710 CYBBP04839 570 aa7.21□□□□□ -1.26
PRKDC-208ENST00000536710 CYP17A1P05093 508 aa7.21□□□□□ -1.26
PRKDC-208ENST00000536710 DBHP09172 617 aa7.21□□□□□ -1.26
PRKDC-208ENST00000536710 CCND1P24385 295 aa7.21□□□□□ -1.26
PRKDC-208ENST00000536710 GJA4P35212 333 aa7.21□□□□□ -1.26
PRKDC-208ENST00000536710 IARSP41252 1262 aaKnown RBP7.21□□□□□ -1.26
PRKDC-208ENST00000536710 RAB27AP51159 221 aa7.21□□□□□ -1.26
PRKDC-208ENST00000536710 SCAND1P57086 179 aa7.21□□□□□ -1.26
PRKDC-208ENST00000536710 TERF2Q15554 542 aa7.21□□□□□ -1.26
PRKDC-208ENST00000536710 CCDC181Q5TID7 509 aa7.21□□□□□ -1.26
PRKDC-208ENST00000536710 CHMP4CQ96CF2 233 aa7.21□□□□□ -1.26
PRKDC-208ENST00000536710 HOOK2Q96ED9 719 aa7.21□□□□□ -1.26
PRKDC-208ENST00000536710 CCDC136Q96JN2 1154 aa7.21□□□□□ -1.26
PRKDC-208ENST00000536710 MENTQ9BUN1 341 aa7.21□□□□□ -1.26
PRKDC-208ENST00000536710 MS4A5Q9H3V2 200 aa7.21□□□□□ -1.26
PRKDC-208ENST00000536710 ASH2LQ9UBL3 628 aa7.21□□□□□ -1.26
PRKDC-208ENST00000536710 ZNF652Q9Y2D9 606 aa7.21□□□□□ -1.26
PRKDC-208ENST00000536710 SPEF1Q9Y4P9 236 aa7.21□□□□□ -1.26
PRKDC-208ENST00000536710 SHTN1A0MZ66 631 aa7.2□□□□□ -1.26
PRKDC-208ENST00000536710 FAM90A27PA6NNH2 459 aa7.2□□□□□ -1.26
PRKDC-208ENST00000536710 BUB1BO60566 1050 aaPredicted RBP7.2□□□□□ -1.26
PRKDC-208ENST00000536710 ADAMTS4O75173 837 aa7.2□□□□□ -1.26
PRKDC-208ENST00000536710 SMAD3P84022 425 aaKnown RBP7.2□□□□□ -1.26
PRKDC-208ENST00000536710 KLF1Q13351 362 aaPredicted RBP7.2□□□□□ -1.26
PRKDC-208ENST00000536710 SEC23AQ15436 765 aa7.2□□□□□ -1.26
PRKDC-208ENST00000536710 SMAD2Q15796 467 aaKnown RBP7.2□□□□□ -1.26
PRKDC-208ENST00000536710 ADGRF1Q5T601 910 aa7.2□□□□□ -1.26
PRKDC-208ENST00000536710 PAQR3Q6TCH7 311 aa7.2□□□□□ -1.26
PRKDC-208ENST00000536710 RASSF3Q86WH2 238 aa7.2□□□□□ -1.26
PRKDC-208ENST00000536710 DLG3Q92796 817 aa7.2□□□□□ -1.26
PRKDC-208ENST00000536710 TSR2Q969E8 191 aaKnown RBP7.2□□□□□ -1.26
PRKDC-208ENST00000536710 SHISA4Q96DD7 197 aa7.2□□□□□ -1.26
PRKDC-208ENST00000536710 RNF32Q9H0A6 362 aa7.2□□□□□ -1.26
PRKDC-208ENST00000536710 TNFRSF12AQ9NP84 129 aa7.2□□□□□ -1.26
PRKDC-208ENST00000536710 ZIM2Q9NZV7 527 aa7.2□□□□□ -1.26
PRKDC-208ENST00000536710 TELO2Q9Y4R8 837 aa7.2□□□□□ -1.26
PRKDC-208ENST00000536710 TNKSO95271 1327 aa7.2□□□□□ -1.26
PRKDC-208ENST00000536710 TCRBV5S2A0A599 114 aa7.19□□□□□ -1.26
PRKDC-208ENST00000536710 GOLGA8AA7E2F4 631 aa7.19□□□□□ -1.26
PRKDC-208ENST00000536710 GOLGA8BA8MQT2 603 aa7.19□□□□□ -1.26
PRKDC-208ENST00000536710 SRGAP3O43295 1099 aa7.19□□□□□ -1.26
PRKDC-208ENST00000536710 KDM1AO60341 852 aa7.19□□□□□ -1.26
PRKDC-208ENST00000536710 MPOP05164 745 aa7.19□□□□□ -1.26
PRKDC-208ENST00000536710 CD40P25942 277 aa7.19□□□□□ -1.26
PRKDC-208ENST00000536710 AFMP43652 599 aa7.19□□□□□ -1.26
PRKDC-208ENST00000536710 EPHA5P54756 1037 aa7.19□□□□□ -1.26
PRKDC-208ENST00000536710 ERVK-21P61565 698 aa7.19□□□□□ -1.26
PRKDC-208ENST00000536710 RAB3GAP1Q15042 981 aa7.19□□□□□ -1.26
PRKDC-208ENST00000536710 NFE2Q16621 373 aaPredicted RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms