RNA–Protein interactions for RNA: ENST00000535900.5

UBE3B-205, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-205ENST00000535900 PPIGQ13427 754 aaKnown RBP eCLIP12.18□□□□□ -0.469e-6■■□□□ 12.8
UBE3B-205ENST00000535900 ZNF174Q15697 407 aa12.18□□□□□ -0.46
UBE3B-205ENST00000535900 CEP55Q53EZ4 464 aa12.18□□□□□ -0.46
UBE3B-205ENST00000535900 ARHGEF16Q5VV41 709 aa12.18□□□□□ -0.46
UBE3B-205ENST00000535900 EEPD1Q7L9B9 569 aa12.18□□□□□ -0.46
UBE3B-205ENST00000535900 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.18□□□□□ -0.46
UBE3B-205ENST00000535900 SLFN12Q8IYM2 578 aa12.18□□□□□ -0.46
UBE3B-205ENST00000535900 TBC1D5Q92609 795 aa12.18□□□□□ -0.46
UBE3B-205ENST00000535900 CDHR1Q96JP9 859 aa12.18□□□□□ -0.46
UBE3B-205ENST00000535900 FAM20AQ96MK3 541 aa12.18□□□□□ -0.46
UBE3B-205ENST00000535900 CDX2Q99626 313 aaPredicted RBP12.18□□□□□ -0.46
UBE3B-205ENST00000535900 RAB34Q9BZG1 259 aa12.18□□□□□ -0.46
UBE3B-205ENST00000535900 PXMP2Q9NR77 195 aa12.18□□□□□ -0.46
UBE3B-205ENST00000535900 DDX25Q9UHL0 483 aaKnown RBP12.18□□□□□ -0.46
UBE3B-205ENST00000535900 SRPRBQ9Y5M8 271 aaKnown RBP12.18□□□□□ -0.46
UBE3B-205ENST00000535900 ASTN1O14525 1302 aa12.17□□□□□ -0.46
UBE3B-205ENST00000535900 TMEM265A0A087WTH1 108 aa12.17□□□□□ -0.46
UBE3B-205ENST00000535900 ZEB2O60315 1214 aa12.17□□□□□ -0.46
UBE3B-205ENST00000535900 OR52Z1P0C646 297 aa12.17□□□□□ -0.46
UBE3B-205ENST00000535900 FOSL2P15408 326 aa12.17□□□□□ -0.46
UBE3B-205ENST00000535900 CCND2P30279 289 aa12.17□□□□□ -0.46
UBE3B-205ENST00000535900 ZNF76P36508 570 aa12.17□□□□□ -0.46
UBE3B-205ENST00000535900 CEBPZQ03701 1054 aaKnown RBP12.17□□□□□ -0.46
UBE3B-205ENST00000535900 CALCRLQ16602 461 aa12.17□□□□□ -0.46
UBE3B-205ENST00000535900 FSCN1Q16658 493 aaKnown RBP12.17□□□□□ -0.46
UBE3B-205ENST00000535900 CXCL17Q6UXB2 119 aa12.17□□□□□ -0.46
UBE3B-205ENST00000535900 SLC30A10Q6XR72 485 aa12.17□□□□□ -0.46
UBE3B-205ENST00000535900 VSIG10LQ86VR7 867 aa12.17□□□□□ -0.46
UBE3B-205ENST00000535900 FAM126BQ8IXS8 530 aa12.17□□□□□ -0.46
UBE3B-205ENST00000535900 TMEM199Q8N511 208 aa12.17□□□□□ -0.46
UBE3B-205ENST00000535900 C4orf32Q8N8J7 132 aa12.17□□□□□ -0.46
UBE3B-205ENST00000535900 MAFAQ8NHW3 353 aaPredicted RBP12.17□□□□□ -0.46
UBE3B-205ENST00000535900 MYLIPQ8WY64 445 aa12.17□□□□□ -0.46
UBE3B-205ENST00000535900 AK8Q96MA6 479 aa12.17□□□□□ -0.46
UBE3B-205ENST00000535900 PDCD2LQ9BRP1 358 aa12.17□□□□□ -0.46
UBE3B-205ENST00000535900 SEMA6BQ9H3T3 888 aa12.17□□□□□ -0.46
UBE3B-205ENST00000535900 VTA1Q9NP79 307 aa12.17□□□□□ -0.46
UBE3B-205ENST00000535900 STK24Q9Y6E0 443 aa12.17□□□□□ -0.46
UBE3B-205ENST00000535900 DDX49Q9Y6V7 483 aaKnown RBP12.17□□□□□ -0.46
UBE3B-205ENST00000535900 MEIS1O00470 390 aa12.16□□□□□ -0.46
UBE3B-205ENST00000535900 SLC26A4O43511 780 aa12.16□□□□□ -0.46
UBE3B-205ENST00000535900 CABYRO75952 493 aa12.16□□□□□ -0.46
UBE3B-205ENST00000535900 NR3C2P08235 984 aa12.16□□□□□ -0.46
UBE3B-205ENST00000535900 SMPD1P17405 629 aa12.16□□□□□ -0.46
UBE3B-205ENST00000535900 CMA1P23946 247 aa12.16□□□□□ -0.46
UBE3B-205ENST00000535900 DNAJB2P25686 324 aa12.16□□□□□ -0.46
UBE3B-205ENST00000535900 LONP1P36776 959 aaKnown RBP12.16□□□□□ -0.46
UBE3B-205ENST00000535900 ALDH5A1P51649 535 aaPredicted RBP12.16□□□□□ -0.46
UBE3B-205ENST00000535900 PDIA5Q14554 519 aa12.16□□□□□ -0.46
UBE3B-205ENST00000535900 PGM5Q15124 567 aa12.16□□□□□ -0.46
UBE3B-205ENST00000535900 TMEM266Q2M3C6 531 aa12.16□□□□□ -0.46
UBE3B-205ENST00000535900 MFSD5Q6N075 450 aa12.16□□□□□ -0.46
UBE3B-205ENST00000535900 PSRC1Q6PGN9 363 aaPredicted RBP12.16□□□□□ -0.46
UBE3B-205ENST00000535900 DTHD1Q6ZMT9 781 aa12.16□□□□□ -0.46
UBE3B-205ENST00000535900 SYAP1Q96A49 352 aaPredicted RBP12.16□□□□□ -0.46
UBE3B-205ENST00000535900 MTMR9Q96QG7 549 aa12.16□□□□□ -0.46
UBE3B-205ENST00000535900 TAAR1Q96RJ0 339 aa12.16□□□□□ -0.46
UBE3B-205ENST00000535900 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.16□□□□□ -0.46
UBE3B-205ENST00000535900 MXRA8Q9BRK3 442 aa12.16□□□□□ -0.46
UBE3B-205ENST00000535900 PYM1Q9BRP8 204 aaKnown RBP12.16□□□□□ -0.46
UBE3B-205ENST00000535900 FTOQ9C0B1 505 aaKnown RBP eCLIP12.16□□□□□ -0.46
UBE3B-205ENST00000535900 TTYH1Q9H313 450 aaPredicted RBP12.16□□□□□ -0.46
UBE3B-205ENST00000535900 COL20A1Q9P218 1284 aa12.16□□□□□ -0.46
UBE3B-205ENST00000535900 PCDHA7Q9UN72 937 aa12.16□□□□□ -0.46
UBE3B-205ENST00000535900 GNEQ9Y223 722 aaKnown RBP12.16□□□□□ -0.46
UBE3B-205ENST00000535900 CTAGE5O15320 804 aa12.15□□□□□ -0.46
UBE3B-205ENST00000535900 DYNC1LI2O43237 492 aaPredicted RBP12.15□□□□□ -0.46
UBE3B-205ENST00000535900 EDIL3O43854 480 aa12.15□□□□□ -0.46
UBE3B-205ENST00000535900 EIF3JO75822 258 aaKnown RBP12.15□□□□□ -0.46
UBE3B-205ENST00000535900 CSF2RAP15509 400 aa12.15□□□□□ -0.46
UBE3B-205ENST00000535900 PTGS1P23219 599 aa12.15□□□□□ -0.46
UBE3B-205ENST00000535900 EDNRBP24530 442 aa12.15□□□□□ -0.46
UBE3B-205ENST00000535900 CDK7P50613 346 aa12.15□□□□□ -0.46
UBE3B-205ENST00000535900 FXR2P51116 673 aaKnown RBP eCLIP12.15□□□□□ -0.46
UBE3B-205ENST00000535900 STXBP2Q15833 593 aa12.15□□□□□ -0.46
UBE3B-205ENST00000535900 GNPTABQ3T906 1256 aa12.15□□□□□ -0.46
UBE3B-205ENST00000535900 AXDND1Q5T1B0 1012 aaPredicted RBP12.15□□□□□ -0.46
UBE3B-205ENST00000535900 NLRX1Q86UT6 975 aa12.15□□□□□ -0.46
UBE3B-205ENST00000535900 MORC4Q8TE76 937 aa12.15□□□□□ -0.46
UBE3B-205ENST00000535900 GPRASP2Q96D09 838 aa12.15□□□□□ -0.46
UBE3B-205ENST00000535900 PGBD1Q96JS3 809 aa12.15□□□□□ -0.46
UBE3B-205ENST00000535900 MTIF3Q9H2K0 278 aaKnown RBP12.15□□□□□ -0.46
UBE3B-205ENST00000535900 HIPK3Q9H422 1215 aa12.15□□□□□ -0.46
UBE3B-205ENST00000535900 GDPD2Q9HCC8 539 aa12.15□□□□□ -0.46
UBE3B-205ENST00000535900 KCNMB3Q9NPA1 279 aa12.15□□□□□ -0.46
UBE3B-205ENST00000535900 PDGFCQ9NRA1 345 aa12.15□□□□□ -0.46
UBE3B-205ENST00000535900 FBXO2Q9UK22 296 aaPredicted RBP12.15□□□□□ -0.46
UBE3B-205ENST00000535900 UBIAD1Q9Y5Z9 338 aa12.15□□□□□ -0.46
UBE3B-205ENST00000535900 IGLV3-22A0A075B6J6 115 aa12.14□□□□□ -0.47
UBE3B-205ENST00000535900 FAM237AA0A1B0GTK4 181 aa12.14□□□□□ -0.47
UBE3B-205ENST00000535900 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.14□□□□□ -0.47
UBE3B-205ENST00000535900 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.14□□□□□ -0.47
UBE3B-205ENST00000535900 MARCH6O60337 910 aa12.14□□□□□ -0.47
UBE3B-205ENST00000535900 TDP2O95551 362 aa12.14□□□□□ -0.47
UBE3B-205ENST00000535900 ACRP10323 421 aa12.14□□□□□ -0.47
UBE3B-205ENST00000535900 EIF2AK2P19525 551 aaKnown RBP12.14□□□□□ -0.47
UBE3B-205ENST00000535900 MARCKSP29966 332 aaPredicted RBP12.14□□□□□ -0.47
UBE3B-205ENST00000535900 NKX3-2P78367 333 aa12.14□□□□□ -0.47
UBE3B-205ENST00000535900 ITGA7Q13683 1181 aa12.14□□□□□ -0.47
UBE3B-205ENST00000535900 PRR16Q569H4 304 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms