RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 PSEN2P49810 448 aa11.61□□□□□ -0.55
CLSTN3-203ENST00000534830 GNAQP50148 359 aa11.61□□□□□ -0.55
CLSTN3-203ENST00000534830 EXOSC10Q01780 885 aaKnown RBP11.61□□□□□ -0.55
CLSTN3-203ENST00000534830 TCF15Q12870 199 aa11.61□□□□□ -0.55
CLSTN3-203ENST00000534830 SEMA3FQ13275 785 aa11.61□□□□□ -0.55
CLSTN3-203ENST00000534830 CLUL1Q15846 466 aa11.61□□□□□ -0.55
CLSTN3-203ENST00000534830 EPC2Q52LR7 807 aa11.61□□□□□ -0.55
CLSTN3-203ENST00000534830 FCHSD1Q86WN1 690 aa11.61□□□□□ -0.55
CLSTN3-203ENST00000534830 RNF135Q8IUD6 432 aa11.61□□□□□ -0.55
CLSTN3-203ENST00000534830 SUGP1Q8IWZ8 645 aaKnown RBP11.61□□□□□ -0.55
CLSTN3-203ENST00000534830 CTCFLQ8NI51 663 aaPredicted RBP11.61□□□□□ -0.55
CLSTN3-203ENST00000534830 EDAQ92838 391 aa11.61□□□□□ -0.55
CLSTN3-203ENST00000534830 RRP36Q96EU6 259 aaKnown RBP11.61□□□□□ -0.55
CLSTN3-203ENST00000534830 ZFP91Q96JP5 570 aaPredicted RBP11.61□□□□□ -0.55
CLSTN3-203ENST00000534830 INPP4AQ96PE3 977 aaPredicted RBP11.61□□□□□ -0.55
CLSTN3-203ENST00000534830 POP1Q99575 1024 aaKnown RBP11.61□□□□□ -0.55
CLSTN3-203ENST00000534830 C16orf70Q9BSU1 422 aa11.61□□□□□ -0.55
CLSTN3-203ENST00000534830 KATNAL1Q9BW62 490 aa11.61□□□□□ -0.55
CLSTN3-203ENST00000534830 BCAS3Q9H6U6 928 aa11.61□□□□□ -0.55
CLSTN3-203ENST00000534830 TMEM221A6NGB7 291 aa11.6□□□□□ -0.55
CLSTN3-203ENST00000534830 CCDC69A6NI79 296 aa11.6□□□□□ -0.55
CLSTN3-203ENST00000534830 SPATA31C2B4DYI2 1134 aa11.6□□□□□ -0.55
CLSTN3-203ENST00000534830 M0R296 226 aa11.6□□□□□ -0.55
CLSTN3-203ENST00000534830 PARNO95453 639 aaKnown RBP11.6□□□□□ -0.55
CLSTN3-203ENST00000534830 GGPS1O95749 300 aa11.6□□□□□ -0.55
CLSTN3-203ENST00000534830 CXCL10P02778 98 aa11.6□□□□□ -0.55
CLSTN3-203ENST00000534830 CALM1P0DP23 149 aa11.6□□□□□ -0.55
CLSTN3-203ENST00000534830 CALM2P0DP24 149 aa11.6□□□□□ -0.55
CLSTN3-203ENST00000534830 CALM3P0DP25 149 aa11.6□□□□□ -0.55
CLSTN3-203ENST00000534830 HOXC8P31273 242 aa11.6□□□□□ -0.55
CLSTN3-203ENST00000534830 GPM6BQ13491 265 aa11.6□□□□□ -0.55
CLSTN3-203ENST00000534830 HIC1Q14526 733 aa11.6□□□□□ -0.55
CLSTN3-203ENST00000534830 MFSD10Q14728 455 aa11.6□□□□□ -0.55
CLSTN3-203ENST00000534830 KIAA0753Q2KHM9 967 aa11.6□□□□□ -0.55
CLSTN3-203ENST00000534830 TRIM71Q2Q1W2 868 aaKnown RBP11.6□□□□□ -0.55
CLSTN3-203ENST00000534830 TRAF7Q6Q0C0 670 aa11.6□□□□□ -0.55
CLSTN3-203ENST00000534830 USP17L6PQ6QN14 398 aa11.6□□□□□ -0.55
CLSTN3-203ENST00000534830 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.6□□□□□ -0.551e-12■■■■□ 24.8
CLSTN3-203ENST00000534830 BMP8AQ7Z5Y6 402 aa11.6□□□□□ -0.55
CLSTN3-203ENST00000534830 MYOCDQ8IZQ8 938 aa11.6□□□□□ -0.55
CLSTN3-203ENST00000534830 FANCBQ8NB91 859 aa11.6□□□□□ -0.55
CLSTN3-203ENST00000534830 PIBF1Q8WXW3 757 aa11.6□□□□□ -0.55
CLSTN3-203ENST00000534830 SPATA33Q96N06 139 aa11.6□□□□□ -0.55
CLSTN3-203ENST00000534830 LRRC2Q9BYS8 371 aa11.6□□□□□ -0.55
CLSTN3-203ENST00000534830 NSUN3Q9H649 340 aaKnown RBP11.6□□□□□ -0.55
CLSTN3-203ENST00000534830 ANO2Q9NQ90 1003 aa11.6□□□□□ -0.55
CLSTN3-203ENST00000534830 ZFHX2Q9C0A1 2572 aaPredicted RBP11.6□□□□□ -0.55
CLSTN3-203ENST00000534830 SPTBN4Q9H254 2564 aa11.6□□□□□ -0.55
CLSTN3-203ENST00000534830 ZNF286BP0CG31 522 aa11.59□□□□□ -0.55
CLSTN3-203ENST00000534830 CKBP12277 381 aa11.59□□□□□ -0.55
CLSTN3-203ENST00000534830 RXRAP19793 462 aa11.59□□□□□ -0.55
CLSTN3-203ENST00000534830 PTK7Q13308 1070 aa11.59□□□□□ -0.55
CLSTN3-203ENST00000534830 SMAD2Q15796 467 aaKnown RBP11.59□□□□□ -0.55
CLSTN3-203ENST00000534830 PKN1Q16512 942 aa11.59□□□□□ -0.55
CLSTN3-203ENST00000534830 PCNX4Q63HM2 1172 aa11.59□□□□□ -0.55
CLSTN3-203ENST00000534830 XRRA1Q6P2D8 792 aa11.59□□□□□ -0.55
CLSTN3-203ENST00000534830 NFXL1Q6ZNB6 911 aa11.59□□□□□ -0.55
CLSTN3-203ENST00000534830 TMTC3Q6ZXV5 915 aa11.59□□□□□ -0.55
CLSTN3-203ENST00000534830 RPAINQ86UA6 219 aa11.59□□□□□ -0.55
CLSTN3-203ENST00000534830 RASEFQ8IZ41 740 aa11.59□□□□□ -0.55
CLSTN3-203ENST00000534830 CMTR1Q8N1G2 835 aaKnown RBP11.59□□□□□ -0.55
CLSTN3-203ENST00000534830 KCNB2Q92953 911 aa11.59□□□□□ -0.55
CLSTN3-203ENST00000534830 SENP7Q9BQF6 1050 aa11.59□□□□□ -0.55
CLSTN3-203ENST00000534830 ALG1Q9BT22 464 aa11.59□□□□□ -0.55
CLSTN3-203ENST00000534830 SLC12A7Q9Y666 1083 aa11.59□□□□□ -0.55
CLSTN3-203ENST00000534830 MICAL3Q7RTP6 2002 aa11.59□□□□□ -0.55
CLSTN3-203ENST00000534830 H3BNC9 293 aa11.58□□□□□ -0.56
CLSTN3-203ENST00000534830 STXBP3O00186 592 aa11.58□□□□□ -0.56
CLSTN3-203ENST00000534830 AMHP03971 560 aa11.58□□□□□ -0.56
CLSTN3-203ENST00000534830 LTBRP36941 435 aa11.58□□□□□ -0.56
CLSTN3-203ENST00000534830 ZNF200P98182 395 aaPredicted RBP11.58□□□□□ -0.56
CLSTN3-203ENST00000534830 FUT2Q10981 343 aa11.58□□□□□ -0.56
CLSTN3-203ENST00000534830 NEDD9Q14511 834 aa11.58□□□□□ -0.56
CLSTN3-203ENST00000534830 ADCK5Q3MIX3 580 aa11.58□□□□□ -0.56
CLSTN3-203ENST00000534830 GNPTABQ3T906 1256 aa11.58□□□□□ -0.56
CLSTN3-203ENST00000534830 METTL7BQ6UX53 244 aa11.58□□□□□ -0.56
CLSTN3-203ENST00000534830 TRIM67Q6ZTA4 783 aa11.58□□□□□ -0.56
CLSTN3-203ENST00000534830 C7orf31Q8N865 590 aa11.58□□□□□ -0.56
CLSTN3-203ENST00000534830 SMARCC2Q8TAQ2 1214 aa11.58□□□□□ -0.56
CLSTN3-203ENST00000534830 ATOH1Q92858 354 aaPredicted RBP11.58□□□□□ -0.56
CLSTN3-203ENST00000534830 WNT8BQ93098 351 aa11.58□□□□□ -0.56
CLSTN3-203ENST00000534830 SAMD11Q96NU1 681 aa11.58□□□□□ -0.56
CLSTN3-203ENST00000534830 NEK1Q96PY6 1258 aa11.58□□□□□ -0.56
CLSTN3-203ENST00000534830 YME1L1Q96TA2 773 aa11.58□□□□□ -0.56
CLSTN3-203ENST00000534830 MLXIPQ9HAP2 919 aa11.58□□□□□ -0.56
CLSTN3-203ENST00000534830 RTEL1Q9NZ71 1219 aa11.58□□□□□ -0.56
CLSTN3-203ENST00000534830 SEC63Q9UGP8 760 aaKnown RBP11.58□□□□□ -0.56
CLSTN3-203ENST00000534830 H3BRB1 525 aa11.57□□□□□ -0.56
CLSTN3-203ENST00000534830 FIBPO43427 364 aa11.57□□□□□ -0.56
CLSTN3-203ENST00000534830 MBTPS2O43462 519 aa11.57□□□□□ -0.56
CLSTN3-203ENST00000534830 NCK2O43639 380 aa11.57□□□□□ -0.56
CLSTN3-203ENST00000534830 SORBS3O60504 671 aa11.57□□□□□ -0.56
CLSTN3-203ENST00000534830 LGALS2P05162 132 aa11.57□□□□□ -0.56
CLSTN3-203ENST00000534830 DLX2Q07687 328 aaPredicted RBP11.57□□□□□ -0.56
CLSTN3-203ENST00000534830 COL19A1Q14993 1142 aa11.57□□□□□ -0.56
CLSTN3-203ENST00000534830 RNF20Q5VTR2 975 aa11.57□□□□□ -0.56
CLSTN3-203ENST00000534830 APOA5Q6Q788 366 aa11.57□□□□□ -0.56
CLSTN3-203ENST00000534830 CYFIP1Q7L576 1253 aa11.57□□□□□ -0.56
CLSTN3-203ENST00000534830 DHX32Q7L7V1 743 aaKnown RBP11.57□□□□□ -0.56
CLSTN3-203ENST00000534830 RAB11FIP4Q86YS3 637 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms