RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, human

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-238	ENST00000534647	RNPEP	Q9H4A4	650 aa		13.35	□□□□□ -0.27
CTNND1-238	ENST00000534647	PI4K2B	G5E9Z4	385 aa		13.34	□□□□□ -0.27
CTNND1-238	ENST00000534647	CYTH3	O43739	400 aa		13.34	□□□□□ -0.27
CTNND1-238	ENST00000534647	LGALS2	P05162	132 aa		13.34	□□□□□ -0.27
CTNND1-238	ENST00000534647	SMIM10L2A	P0DMW4	78 aa		13.34	□□□□□ -0.27
CTNND1-238	ENST00000534647	SMIM10L2B	P0DMW5	78 aa		13.34	□□□□□ -0.27
CTNND1-238	ENST00000534647	GNAT1	P11488	350 aa		13.34	□□□□□ -0.27
CTNND1-238	ENST00000534647	ADAM17	P78536	824 aa		13.34	□□□□□ -0.27
CTNND1-238	ENST00000534647	MRPS9	P82933	396 aa	Known RBP	13.34	□□□□□ -0.27
CTNND1-238	ENST00000534647	FAM26D	Q5JW98	314 aa		13.34	□□□□□ -0.27
CTNND1-238	ENST00000534647	TMEM31	Q5JXX7	168 aa		13.34	□□□□□ -0.27
CTNND1-238	ENST00000534647	XRRA1	Q6P2D8	792 aa		13.34	□□□□□ -0.27
CTNND1-238	ENST00000534647	METTL7B	Q6UX53	244 aa		13.34	□□□□□ -0.27
CTNND1-238	ENST00000534647	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	13.34	□□□□□ -0.27
CTNND1-238	ENST00000534647	MRPL38	Q96DV4	380 aa	Known RBP	13.34	□□□□□ -0.27
CTNND1-238	ENST00000534647	FAM122A	Q96E09	287 aa		13.34	□□□□□ -0.27
CTNND1-238	ENST00000534647	MAP3K14	Q99558	947 aa		13.34	□□□□□ -0.27
CTNND1-238	ENST00000534647	SENP7	Q9BQF6	1050 aa		13.34	□□□□□ -0.27
CTNND1-238	ENST00000534647	UBE2Z	Q9H832	354 aa	Predicted RBP	13.34	□□□□□ -0.27
CTNND1-238	ENST00000534647	IFIT3	O14879	490 aa	Known RBP	13.33	□□□□□ -0.28
CTNND1-238	ENST00000534647	TREH	O43280	583 aa		13.33	□□□□□ -0.28
CTNND1-238	ENST00000534647	CYP21A2	P08686	494 aa		13.33	□□□□□ -0.28
CTNND1-238	ENST00000534647	SMARCA1	P28370	1054 aa		13.33	□□□□□ -0.28
CTNND1-238	ENST00000534647	PUS10	Q3MIT2	529 aa	Known RBP	13.33	□□□□□ -0.28
CTNND1-238	ENST00000534647	FCHSD1	Q86WN1	690 aa		13.33	□□□□□ -0.28
CTNND1-238	ENST00000534647	RUFY2	Q8WXA3	655 aa		13.33	□□□□□ -0.28
CTNND1-238	ENST00000534647	SEPT8	Q92599	483 aa		13.33	□□□□□ -0.28
CTNND1-238	ENST00000534647	APBB2	Q92870	758 aa		13.33	□□□□□ -0.28
CTNND1-238	ENST00000534647	GPR20	Q99678	358 aa		13.33	□□□□□ -0.28
CTNND1-238	ENST00000534647	C17orf80	Q9BSJ5	609 aa		13.33	□□□□□ -0.28
CTNND1-238	ENST00000534647	BCAS3	Q9H6U6	928 aa		13.33	□□□□□ -0.28
CTNND1-238	ENST00000534647	MTUS1	Q9ULD2	1270 aa		13.33	□□□□□ -0.28
CTNND1-238	ENST00000534647	COL4A6	Q14031	1691 aa		13.32	□□□□□ -0.28
CTNND1-238	ENST00000534647	ERICH2	A1L162	156 aa		13.32	□□□□□ -0.28
CTNND1-238	ENST00000534647		H3BNC9	293 aa		13.32	□□□□□ -0.28
CTNND1-238	ENST00000534647	PIK3CD	O00329	1044 aa		13.32	□□□□□ -0.28
CTNND1-238	ENST00000534647	NOP56	O00567	594 aa	Known RBP	13.32	□□□□□ -0.28
CTNND1-238	ENST00000534647	FIBP	O43427	364 aa		13.32	□□□□□ -0.28
CTNND1-238	ENST00000534647	SEMA3F	Q13275	785 aa		13.32	□□□□□ -0.28
CTNND1-238	ENST00000534647	COL19A1	Q14993	1142 aa		13.32	□□□□□ -0.28
CTNND1-238	ENST00000534647	SART3	Q15020	963 aa	Known RBP	13.32	□□□□□ -0.28
CTNND1-238	ENST00000534647	PTPRO	Q16827	1216 aa		13.32	□□□□□ -0.28
CTNND1-238	ENST00000534647	EPC2	Q52LR7	807 aa		13.32	□□□□□ -0.28
CTNND1-238	ENST00000534647	FAM117B	Q6P1L5	589 aa		13.32	□□□□□ -0.28
CTNND1-238	ENST00000534647	RPAIN	Q86UA6	219 aa		13.32	□□□□□ -0.28
CTNND1-238	ENST00000534647	HOMER1	Q86YM7	354 aa		13.32	□□□□□ -0.28
CTNND1-238	ENST00000534647	FAM178B	Q8IXR5	827 aa		13.32	□□□□□ -0.28
CTNND1-238	ENST00000534647	MYOCD	Q8IZQ8	938 aa		13.32	□□□□□ -0.28
CTNND1-238	ENST00000534647	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	13.32	□□□□□ -0.28
CTNND1-238	ENST00000534647	OXER1	Q8TDS5	423 aa		13.32	□□□□□ -0.28
CTNND1-238	ENST00000534647	IGDCC4	Q8TDY8	1250 aa		13.32	□□□□□ -0.28
CTNND1-238	ENST00000534647	MTA3	Q9BTC8	594 aa		13.32	□□□□□ -0.28
CTNND1-238	ENST00000534647	CD320	Q9NPF0	282 aa		13.32	□□□□□ -0.28
CTNND1-238	ENST00000534647	COL4A4	P53420	1690 aa	Predicted RBP	13.31	□□□□□ -0.28
CTNND1-238	ENST00000534647	MYH6	P13533	1939 aa		13.31	□□□□□ -0.28
CTNND1-238	ENST00000534647	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	13.31	□□□□□ -0.28
CTNND1-238	ENST00000534647	SORBS3	O60504	671 aa		13.31	□□□□□ -0.28
CTNND1-238	ENST00000534647	WTAP	Q15007	396 aa		13.31	□□□□□ -0.28
CTNND1-238	ENST00000534647	TTC22	Q5TAA0	569 aa		13.31	□□□□□ -0.28
CTNND1-238	ENST00000534647	PCNX4	Q63HM2	1172 aa		13.31	□□□□□ -0.28
CTNND1-238	ENST00000534647	CYFIP1	Q7L576	1253 aa		13.31	□□□□□ -0.28
CTNND1-238	ENST00000534647	GIMAP8	Q8ND71	665 aa	Predicted RBP	13.31	□□□□□ -0.28
CTNND1-238	ENST00000534647	NCOA7	Q8NI08	942 aa		13.31	□□□□□ -0.28
CTNND1-238	ENST00000534647	NEK9	Q8TD19	979 aa		13.31	□□□□□ -0.28
CTNND1-238	ENST00000534647	KHSRP	Q92945	711 aa	Known RBP eCLIP	13.31	□□□□□ -0.28
CTNND1-238	ENST00000534647	SPZ1	Q9BXG8	430 aa		13.31	□□□□□ -0.28
CTNND1-238	ENST00000534647	SENP2	Q9HC62	589 aa		13.31	□□□□□ -0.28
CTNND1-238	ENST00000534647	C11orf16	Q9NQ32	467 aa		13.31	□□□□□ -0.28
CTNND1-238	ENST00000534647	SETD4	Q9NVD3	440 aa		13.31	□□□□□ -0.28
CTNND1-238	ENST00000534647	ZNF215	Q9UL58	517 aa	Predicted RBP	13.31	□□□□□ -0.28
CTNND1-238	ENST00000534647	BRWD1	Q9NSI6	2320 aa		13.31	□□□□□ -0.28
CTNND1-238	ENST00000534647	NRCAM	Q92823	1304 aa		13.31	□□□□□ -0.28
CTNND1-238	ENST00000534647	MYH7B	A7E2Y1	1941 aa		13.31	□□□□□ -0.28
CTNND1-238	ENST00000534647	GRXCR2	A6NFK2	248 aa		13.3	□□□□□ -0.28
CTNND1-238	ENST00000534647		E7EWF7	191 aa		13.3	□□□□□ -0.28
CTNND1-238	ENST00000534647	MEIS2	O14770	477 aa		13.3	□□□□□ -0.28
CTNND1-238	ENST00000534647	GSPT1	P15170	499 aa	Known RBP	13.3	□□□□□ -0.28
CTNND1-238	ENST00000534647	CHML	P26374	656 aa		13.3	□□□□□ -0.28
CTNND1-238	ENST00000534647	PTH1R	Q03431	593 aa		13.3	□□□□□ -0.28
CTNND1-238	ENST00000534647	TIGD5	Q53EQ6	642 aa		13.3	□□□□□ -0.28
CTNND1-238	ENST00000534647	CATIP	Q7Z7H3	387 aa		13.3	□□□□□ -0.28
CTNND1-238	ENST00000534647	RALYL	Q86SE5	291 aa	Known RBP	13.3	□□□□□ -0.28
CTNND1-238	ENST00000534647	TMEM192	Q8IY95	271 aa		13.3	□□□□□ -0.28
CTNND1-238	ENST00000534647	YME1L1	Q96TA2	773 aa		13.3	□□□□□ -0.28
CTNND1-238	ENST00000534647	LZTS2	Q9BRK4	669 aa		13.3	□□□□□ -0.28
CTNND1-238	ENST00000534647	OSBPL7	Q9BZF2	842 aa		13.3	□□□□□ -0.28
CTNND1-238	ENST00000534647	EHMT1	Q9H9B1	1298 aa		13.3	□□□□□ -0.28
CTNND1-238	ENST00000534647	HCN4	Q9Y3Q4	1203 aa		13.3	□□□□□ -0.28
CTNND1-238	ENST00000534647	SI	P14410	1827 aa		13.29	□□□□□ -0.28
CTNND1-238	ENST00000534647	C5orf67	F2Z3F1	127 aa		13.29	□□□□□ -0.28
CTNND1-238	ENST00000534647	NCK2	O43639	380 aa		13.29	□□□□□ -0.28
CTNND1-238	ENST00000534647	RB1	P06400	928 aa		13.29	□□□□□ -0.28
CTNND1-238	ENST00000534647	KCNA5	P22460	613 aa		13.29	□□□□□ -0.28
CTNND1-238	ENST00000534647	FECH	P22830	423 aa		13.29	□□□□□ -0.28
CTNND1-238	ENST00000534647	PDE4C	Q08493	712 aa		13.29	□□□□□ -0.28
CTNND1-238	ENST00000534647	GPM6B	Q13491	265 aa		13.29	□□□□□ -0.28
CTNND1-238	ENST00000534647	TAF2	Q6P1X5	1199 aa		13.29	□□□□□ -0.28
CTNND1-238	ENST00000534647	NLRX1	Q86UT6	975 aa		13.29	□□□□□ -0.28
CTNND1-238	ENST00000534647	GJD3	Q8N144	294 aa		13.29	□□□□□ -0.28
CTNND1-238	ENST00000534647	BANK1	Q8NDB2	785 aa		13.29	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms