RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 ITGB5P18084 799 aa20.78■□□□□ 0.92
UBXN1-216ENST00000533908 RXRAP19793 462 aa20.78■□□□□ 0.92
UBXN1-216ENST00000533908 XRRA1Q6P2D8 792 aa20.78■□□□□ 0.92
UBXN1-216ENST00000533908 CTCFLQ8NI51 663 aaPredicted RBP20.78■□□□□ 0.92
UBXN1-216ENST00000533908 hCG_1642624A0A1W2PR95 340 aa20.77■□□□□ 0.92
UBXN1-216ENST00000533908 H3BNC9 293 aa20.77■□□□□ 0.92
UBXN1-216ENST00000533908 TCF7P36402 384 aaPredicted RBP20.77■□□□□ 0.92
UBXN1-216ENST00000533908 IRX6P78412 446 aaPredicted RBP20.77■□□□□ 0.92
UBXN1-216ENST00000533908 RAB11FIP4Q86YS3 637 aa20.77■□□□□ 0.92
UBXN1-216ENST00000533908 TMEM192Q8IY95 271 aa20.77■□□□□ 0.92
UBXN1-216ENST00000533908 CUL5Q93034 780 aa20.77■□□□□ 0.92
UBXN1-216ENST00000533908 YME1L1Q96TA2 773 aa20.77■□□□□ 0.92
UBXN1-216ENST00000533908 EHMT1Q9H9B1 1298 aa20.77■□□□□ 0.92
UBXN1-216ENST00000533908 SH2B2O14492 632 aaPredicted RBP20.76■□□□□ 0.91
UBXN1-216ENST00000533908 IL9P15248 144 aa20.76■□□□□ 0.91
UBXN1-216ENST00000533908 KIF5BP33176 963 aa20.76■□□□□ 0.91
UBXN1-216ENST00000533908 PLA2G5P39877 138 aa20.76■□□□□ 0.91
UBXN1-216ENST00000533908 GPM6BQ13491 265 aa20.76■□□□□ 0.91
UBXN1-216ENST00000533908 NLRX1Q86UT6 975 aa20.76■□□□□ 0.91
UBXN1-216ENST00000533908 FAM178BQ8IXR5 827 aa20.76■□□□□ 0.91
UBXN1-216ENST00000533908 IFIH1Q9BYX4 1025 aaKnown RBP20.76■□□□□ 0.91
UBXN1-216ENST00000533908 LSG1Q9H089 658 aaKnown RBP20.76■□□□□ 0.91
UBXN1-216ENST00000533908 PSTPIP2Q9H939 334 aa20.76■□□□□ 0.91
UBXN1-216ENST00000533908 ZNF215Q9UL58 517 aaPredicted RBP20.76■□□□□ 0.91
UBXN1-216ENST00000533908 UBIAD1Q9Y5Z9 338 aa20.76■□□□□ 0.91
UBXN1-216ENST00000533908 NRCAMQ92823 1304 aa20.76■□□□□ 0.91
UBXN1-216ENST00000533908 FAM86C2PA6NEL3 165 aa20.75■□□□□ 0.91
UBXN1-216ENST00000533908 PI4K2BG5E9Z4 385 aa20.75■□□□□ 0.91
UBXN1-216ENST00000533908 LINC00271P0C7V0 271 aa20.75■□□□□ 0.91
UBXN1-216ENST00000533908 GHRP10912 638 aa20.75■□□□□ 0.91
UBXN1-216ENST00000533908 MGAT3Q09327 533 aa20.75■□□□□ 0.91
UBXN1-216ENST00000533908 LPIN1Q14693 890 aa20.75■□□□□ 0.91
UBXN1-216ENST00000533908 UBE2SQ16763 222 aa20.75■□□□□ 0.91
UBXN1-216ENST00000533908 MARCH8Q5T0T0 291 aa20.75■□□□□ 0.91
UBXN1-216ENST00000533908 RPAINQ86UA6 219 aa20.75■□□□□ 0.91
UBXN1-216ENST00000533908 NEK9Q8TD19 979 aa20.75■□□□□ 0.91
UBXN1-216ENST00000533908 GPRASP2Q96D09 838 aa20.75■□□□□ 0.91
UBXN1-216ENST00000533908 ZBTB10Q96DT7 871 aa20.75■□□□□ 0.91
UBXN1-216ENST00000533908 SAMD11Q96NU1 681 aa20.75■□□□□ 0.91
UBXN1-216ENST00000533908 LZTS2Q9BRK4 669 aa20.75■□□□□ 0.91
UBXN1-216ENST00000533908 PKD2L1Q9P0L9 805 aa20.75■□□□□ 0.91
UBXN1-216ENST00000533908 GRXCR2A6NFK2 248 aa20.74■□□□□ 0.91
UBXN1-216ENST00000533908 MARK3P27448 753 aa20.74■□□□□ 0.91
UBXN1-216ENST00000533908 TCEAL5Q5H9L2 206 aa20.74■□□□□ 0.91
UBXN1-216ENST00000533908 TMEM31Q5JXX7 168 aa20.74■□□□□ 0.91
UBXN1-216ENST00000533908 CASC1Q6TDU7 716 aa20.74■□□□□ 0.91
UBXN1-216ENST00000533908 CCDC82Q8N4S0 544 aa20.74■□□□□ 0.91
UBXN1-216ENST00000533908 GIMAP8Q8ND71 665 aaPredicted RBP20.74■□□□□ 0.91
UBXN1-216ENST00000533908 BANK1Q8NDB2 785 aa20.74■□□□□ 0.91
UBXN1-216ENST00000533908 SEPT1Q8WYJ6 367 aa20.74■□□□□ 0.91
UBXN1-216ENST00000533908 APBB2Q92870 758 aa20.74■□□□□ 0.91
UBXN1-216ENST00000533908 MTA3Q9BTC8 594 aa20.74■□□□□ 0.91
UBXN1-216ENST00000533908 SEC63Q9UGP8 760 aaKnown RBP20.74■□□□□ 0.91
UBXN1-216ENST00000533908 H3BQ06 376 aaPredicted RBP20.73■□□□□ 0.91
UBXN1-216ENST00000533908 ENPP3O14638 875 aa20.73■□□□□ 0.91
UBXN1-216ENST00000533908 SLC27A2O14975 620 aa20.73■□□□□ 0.91
UBXN1-216ENST00000533908 GPR37L1O60883 481 aa20.73■□□□□ 0.91
UBXN1-216ENST00000533908 MCM5P33992 734 aa20.73■□□□□ 0.91
UBXN1-216ENST00000533908 GNAQP50148 359 aa20.73■□□□□ 0.91
UBXN1-216ENST00000533908 PTPROQ16827 1216 aa20.73■□□□□ 0.91
UBXN1-216ENST00000533908 PTCRAQ6ISU1 281 aaPredicted RBP20.73■□□□□ 0.91
UBXN1-216ENST00000533908 NFXL1Q6ZNB6 911 aa20.73■□□□□ 0.91
UBXN1-216ENST00000533908 DNAJB3Q8WWF6 145 aa20.73■□□□□ 0.91
UBXN1-216ENST00000533908 IL17RAQ96F46 866 aa20.73■□□□□ 0.91
UBXN1-216ENST00000533908 TMEM87BQ96K49 555 aa20.73■□□□□ 0.91
UBXN1-216ENST00000533908 PCYT2Q99447 389 aa20.73■□□□□ 0.91
UBXN1-216ENST00000533908 LRRC2Q9BYS8 371 aa20.73■□□□□ 0.91
UBXN1-216ENST00000533908 COL4A6Q14031 1691 aa20.73■□□□□ 0.91
UBXN1-216ENST00000533908 MYO7AQ13402 2215 aa20.73■□□□□ 0.91
UBXN1-216ENST00000533908 KAT6AQ92794 2004 aa20.72■□□□□ 0.91
UBXN1-216ENST00000533908 MBLAC1A4D2B0 266 aaPredicted RBP20.72■□□□□ 0.91
UBXN1-216ENST00000533908 CCDC69A6NI79 296 aa20.72■□□□□ 0.91
UBXN1-216ENST00000533908 LIFRP42702 1097 aa20.72■□□□□ 0.91
UBXN1-216ENST00000533908 PPFIA1Q13136 1202 aa20.72■□□□□ 0.91
UBXN1-216ENST00000533908 COL19A1Q14993 1142 aa20.72■□□□□ 0.91
UBXN1-216ENST00000533908 NECTIN1Q15223 517 aa20.72■□□□□ 0.91
UBXN1-216ENST00000533908 GRIK4Q16099 956 aa20.72■□□□□ 0.91
UBXN1-216ENST00000533908 GJD3Q8N144 294 aa20.72■□□□□ 0.91
UBXN1-216ENST00000533908 TMTC2Q8N394 836 aa20.72■□□□□ 0.91
UBXN1-216ENST00000533908 FAM122AQ96E09 287 aa20.72■□□□□ 0.91
UBXN1-216ENST00000533908 RC3H2Q9HBD1 1191 aaKnown RBP20.72■□□□□ 0.91
UBXN1-216ENST00000533908 PCDHA6Q9UN73 950 aa20.72■□□□□ 0.91
UBXN1-216ENST00000533908 PCDHA8Q9Y5H6 950 aa20.72■□□□□ 0.91
UBXN1-216ENST00000533908 NLRC5Q86WI3 1866 aa20.71■□□□□ 0.91
UBXN1-216ENST00000533908 FBXO47Q5MNV8 452 aa20.71■□□□□ 0.91
UBXN1-216ENST00000533908 TAF2Q6P1X5 1199 aa20.71■□□□□ 0.91
UBXN1-216ENST00000533908 RTN4RL1Q86UN2 441 aaPredicted RBP20.71■□□□□ 0.91
UBXN1-216ENST00000533908 FIBCD1Q8N539 461 aa20.71■□□□□ 0.91
UBXN1-216ENST00000533908 FANCBQ8NB91 859 aa20.71■□□□□ 0.91
UBXN1-216ENST00000533908 CYP2W1Q8TAV3 490 aa20.71■□□□□ 0.91
UBXN1-216ENST00000533908 AGO3Q9H9G7 860 aaKnown RBP20.71■□□□□ 0.91
UBXN1-216ENST00000533908 JADE2Q9NQC1 790 aa20.71■□□□□ 0.91
UBXN1-216ENST00000533908 ERAP1Q9NZ08 941 aa20.71■□□□□ 0.91
UBXN1-216ENST00000533908 TUBE1Q9UJT0 475 aa20.71■□□□□ 0.91
UBXN1-216ENST00000533908 GRM6O15303 877 aa20.7■□□□□ 0.9
UBXN1-216ENST00000533908 BMPR1AP36894 532 aa20.7■□□□□ 0.9
UBXN1-216ENST00000533908 LTBRP36941 435 aa20.7■□□□□ 0.9
UBXN1-216ENST00000533908 MTMR1Q13613 665 aa20.7■□□□□ 0.9
UBXN1-216ENST00000533908 TIGD5Q53EQ6 642 aa20.7■□□□□ 0.9
UBXN1-216ENST00000533908 CREB3L3Q68CJ9 461 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms