RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 CCND2P30279 289 aa19.08■□□□□ 0.65
PHRF1-205ENST00000533464 MCUR1Q96AQ8 359 aa19.08■□□□□ 0.65
PHRF1-205ENST00000533464 APBA1Q02410 837 aa19.08■□□□□ 0.64
PHRF1-205ENST00000533464 SESTD1Q86VW0 696 aa19.08■□□□□ 0.64
PHRF1-205ENST00000533464 NSUN4Q96CB9 384 aaKnown RBP19.08■□□□□ 0.64
PHRF1-205ENST00000533464 EPHB4P54760 987 aa19.08■□□□□ 0.64
PHRF1-205ENST00000533464 ANKRD20A3Q5VUR7 823 aa19.08■□□□□ 0.64
PHRF1-205ENST00000533464 ALKBH5Q6P6C2 394 aaKnown RBP19.08■□□□□ 0.64
PHRF1-205ENST00000533464 CCDC13Q8IYE1 715 aa19.08■□□□□ 0.64
PHRF1-205ENST00000533464 MED10Q9BTT4 135 aa19.08■□□□□ 0.64
PHRF1-205ENST00000533464 RNF14Q9UBS8 474 aa19.08■□□□□ 0.64
PHRF1-205ENST00000533464 CLCN6P51797 869 aa19.08■□□□□ 0.64
PHRF1-205ENST00000533464 GKAP1Q5VSY0 366 aaPredicted RBP19.08■□□□□ 0.64
PHRF1-205ENST00000533464 TRIM50Q86XT4 487 aa19.08■□□□□ 0.64
PHRF1-205ENST00000533464 VPS52Q8N1B4 723 aa19.08■□□□□ 0.64
PHRF1-205ENST00000533464 STAG2Q8N3U4 1231 aa19.08■□□□□ 0.64
PHRF1-205ENST00000533464 TBC1D31Q96DN5 1066 aa19.08■□□□□ 0.64
PHRF1-205ENST00000533464 E9PMD0 336 aa19.07■□□□□ 0.64
PHRF1-205ENST00000533464 PDIA6Q15084 440 aa19.07■□□□□ 0.64
PHRF1-205ENST00000533464 FAM83BQ5T0W9 1011 aa19.07■□□□□ 0.64
PHRF1-205ENST00000533464 CCDC62Q6P9F0 684 aa19.07■□□□□ 0.64
PHRF1-205ENST00000533464 ZNF34Q8IZ26 560 aa19.07■□□□□ 0.64
PHRF1-205ENST00000533464 CACNA2D3Q8IZS8 1091 aa19.07■□□□□ 0.64
PHRF1-205ENST00000533464 ARHGEF2Q92974 986 aaKnown RBP19.07■□□□□ 0.64
PHRF1-205ENST00000533464 TAF6LQ9Y6J9 622 aa19.07■□□□□ 0.64
PHRF1-205ENST00000533464 JPH2Q9BR39 696 aaPredicted RBP19.07■□□□□ 0.64
PHRF1-205ENST00000533464 OSBPL5Q9H0X9 879 aaPredicted RBP19.07■□□□□ 0.64
PHRF1-205ENST00000533464 ANAPC4Q9UJX5 808 aa19.07■□□□□ 0.64
PHRF1-205ENST00000533464 PLEKHG2Q9H7P9 1386 aa19.07■□□□□ 0.64
PHRF1-205ENST00000533464 PHBP35232 272 aa19.07■□□□□ 0.64
PHRF1-205ENST00000533464 NEDD1Q8NHV4 660 aa19.07■□□□□ 0.64
PHRF1-205ENST00000533464 DPP9Q86TI2 863 aa19.07■□□□□ 0.64
PHRF1-205ENST00000533464 ABHD10Q9NUJ1 306 aa19.07■□□□□ 0.64
PHRF1-205ENST00000533464 AFF2P51816 1311 aa19.06■□□□□ 0.64
PHRF1-205ENST00000533464 GOLGA8IPA6NC78 632 aa19.06■□□□□ 0.64
PHRF1-205ENST00000533464 CCDC160A6NGH7 325 aa19.06■□□□□ 0.64
PHRF1-205ENST00000533464 GOLGA8JA6NMD2 632 aa19.06■□□□□ 0.64
PHRF1-205ENST00000533464 TFAMQ00059 246 aaKnown RBP19.06■□□□□ 0.64
PHRF1-205ENST00000533464 TTC19Q6DKK2 380 aaPredicted RBP19.06■□□□□ 0.64
PHRF1-205ENST00000533464 SRBD1Q8N5C6 995 aaKnown RBP19.06■□□□□ 0.64
PHRF1-205ENST00000533464 RSRC1Q96IZ7 334 aaKnown RBP19.06■□□□□ 0.64
PHRF1-205ENST00000533464 ATF5Q9Y2D1 282 aaPredicted RBP19.06■□□□□ 0.64
PHRF1-205ENST00000533464 DIP2CQ9Y2E4 1556 aa19.06■□□□□ 0.64
PHRF1-205ENST00000533464 ARHGAP4P98171 946 aa19.06■□□□□ 0.64
PHRF1-205ENST00000533464 PDXDC2PQ6P474 469 aa19.06■□□□□ 0.64
PHRF1-205ENST00000533464 IGDCC4Q8TDY8 1250 aa19.06■□□□□ 0.64
PHRF1-205ENST00000533464 NSMCE1Q8WV22 266 aa19.06■□□□□ 0.64
PHRF1-205ENST00000533464 POLD4Q9HCU8 107 aa19.06■□□□□ 0.64
PHRF1-205ENST00000533464 PVALEFA0A1B0GWK0 134 aa19.06■□□□□ 0.64
PHRF1-205ENST00000533464 GBP1P32455 592 aa19.06■□□□□ 0.64
PHRF1-205ENST00000533464 C12orf60Q5U649 245 aa19.06■□□□□ 0.64
PHRF1-205ENST00000533464 DHX40Q8IX18 779 aaKnown RBP19.06■□□□□ 0.64
PHRF1-205ENST00000533464 ATP2A3Q93084 1043 aa19.06■□□□□ 0.64
PHRF1-205ENST00000533464 FAM114A2Q9NRY5 505 aa19.06■□□□□ 0.64
PHRF1-205ENST00000533464 IQSEC2Q5JU85 1478 aa19.06■□□□□ 0.64
PHRF1-205ENST00000533464 ECE2O60344 883 aa19.06■□□□□ 0.64
PHRF1-205ENST00000533464 RFX5P48382 616 aaPredicted RBP19.06■□□□□ 0.64
PHRF1-205ENST00000533464 PLTPP55058 493 aa19.06■□□□□ 0.64
PHRF1-205ENST00000533464 SARNPP82979 210 aaKnown RBP19.06■□□□□ 0.64
PHRF1-205ENST00000533464 C10orf76Q5T2E6 689 aa19.06■□□□□ 0.64
PHRF1-205ENST00000533464 BBOF1Q8ND07 529 aa19.06■□□□□ 0.64
PHRF1-205ENST00000533464 TRIM11Q96F44 468 aa19.06■□□□□ 0.64
PHRF1-205ENST00000533464 APOL6Q9BWW8 343 aa19.06■□□□□ 0.64
PHRF1-205ENST00000533464 AKT3Q9Y243 479 aa19.06■□□□□ 0.64
PHRF1-205ENST00000533464 ADAMTS13Q76LX8 1427 aa19.05■□□□□ 0.64
PHRF1-205ENST00000533464 CRCPO75575 148 aa19.05■□□□□ 0.64
PHRF1-205ENST00000533464 CCNA1P78396 465 aa19.05■□□□□ 0.64
PHRF1-205ENST00000533464 DALRD3Q5D0E6 543 aaKnown RBP19.05■□□□□ 0.64
PHRF1-205ENST00000533464 RCSD1Q6JBY9 416 aa19.05■□□□□ 0.64
PHRF1-205ENST00000533464 SDCCAG8Q86SQ7 713 aaPredicted RBP19.05■□□□□ 0.64
PHRF1-205ENST00000533464 SFR1Q86XK3 245 aa19.05■□□□□ 0.64
PHRF1-205ENST00000533464 MAN1A1P33908 653 aa19.05■□□□□ 0.64
PHRF1-205ENST00000533464 PEX3P56589 373 aa19.05■□□□□ 0.64
PHRF1-205ENST00000533464 FBXO38Q6PIJ6 1188 aa19.05■□□□□ 0.64
PHRF1-205ENST00000533464 CCT6BQ92526 530 aa19.05■□□□□ 0.64
PHRF1-205ENST00000533464 RAD54LQ92698 747 aa19.05■□□□□ 0.64
PHRF1-205ENST00000533464 HAUS1Q96CS2 278 aa19.05■□□□□ 0.64
PHRF1-205ENST00000533464 F5H6K3 240 aa19.05■□□□□ 0.64
PHRF1-205ENST00000533464 TEX33O43247 280 aa19.05■□□□□ 0.64
PHRF1-205ENST00000533464 ATP2C1P98194 919 aaPredicted RBP19.05■□□□□ 0.64
PHRF1-205ENST00000533464 KLRC3Q07444 240 aa19.05■□□□□ 0.64
PHRF1-205ENST00000533464 CEMIPQ8WUJ3 1361 aa19.05■□□□□ 0.64
PHRF1-205ENST00000533464 PSAPP07602 524 aa19.05■□□□□ 0.64
PHRF1-205ENST00000533464 RNF207Q6ZRF8 634 aa19.05■□□□□ 0.64
PHRF1-205ENST00000533464 POTEB3A0JP26 581 aa19.04■□□□□ 0.64
PHRF1-205ENST00000533464 POTECB2RU33 542 aa19.04■□□□□ 0.64
PHRF1-205ENST00000533464 QRICH1Q2TAL8 776 aa19.04■□□□□ 0.64
PHRF1-205ENST00000533464 POTEBQ6S5H4 581 aa19.04■□□□□ 0.64
PHRF1-205ENST00000533464 ANKRD36BP1Q96IX9 119 aa19.04■□□□□ 0.64
PHRF1-205ENST00000533464 PBKQ96KB5 322 aa19.04■□□□□ 0.64
PHRF1-205ENST00000533464 RUNDC3BQ96NL0 473 aa19.04■□□□□ 0.64
PHRF1-205ENST00000533464 KLHL14Q9P2G3 628 aa19.04■□□□□ 0.64
PHRF1-205ENST00000533464 FAN1Q9Y2M0 1017 aa19.04■□□□□ 0.64
PHRF1-205ENST00000533464 PXDNLA1KZ92 1463 aa19.04■□□□□ 0.64
PHRF1-205ENST00000533464 CNGA1P29973 690 aa19.04■□□□□ 0.64
PHRF1-205ENST00000533464 SNX1Q13596 522 aa19.04■□□□□ 0.64
PHRF1-205ENST00000533464 TTBK2Q6IQ55 1244 aa19.04■□□□□ 0.64
PHRF1-205ENST00000533464 NXF1Q9UBU9 619 aaKnown RBP19.04■□□□□ 0.64
PHRF1-205ENST00000533464 ATP8A1Q9Y2Q0 1164 aa19.04■□□□□ 0.64
PHRF1-205ENST00000533464 GOLGA8SH3BPF8 625 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms