RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 CLK2P49760 499 aaKnown RBP26.8■■□□□ 1.88
SMPD1-209ENST00000533196 EVCP57679 992 aa26.8■■□□□ 1.88
SMPD1-209ENST00000533196 SP4Q02446 784 aa26.8■■□□□ 1.88
SMPD1-209ENST00000533196 KCNH7Q9NS40 1196 aa26.8■■□□□ 1.88
SMPD1-209ENST00000533196 NRCAMQ92823 1304 aa26.8■■□□□ 1.88
SMPD1-209ENST00000533196 PTPRSQ13332 1948 aa26.8■■□□□ 1.88
SMPD1-209ENST00000533196 GSTTP1A0A1W2PQM5 241 aa26.79■■□□□ 1.88
SMPD1-209ENST00000533196 TREHO43280 583 aa26.79■■□□□ 1.88
SMPD1-209ENST00000533196 PRPF3O43395 683 aaKnown RBP26.79■■□□□ 1.88
SMPD1-209ENST00000533196 SREBF1P36956 1147 aa26.79■■□□□ 1.88
SMPD1-209ENST00000533196 WDR5P61964 334 aaKnown RBP26.79■■□□□ 1.88
SMPD1-209ENST00000533196 IKBKEQ14164 716 aa26.79■■□□□ 1.88
SMPD1-209ENST00000533196 TRIM50Q86XT4 487 aa26.79■■□□□ 1.88
SMPD1-209ENST00000533196 ERAP1Q9NZ08 941 aa26.79■■□□□ 1.88
SMPD1-209ENST00000533196 NFASCO94856 1347 aa26.79■■□□□ 1.88
SMPD1-209ENST00000533196 DLL1O00548 723 aa26.78■■□□□ 1.88
SMPD1-209ENST00000533196 LGR5O75473 907 aa26.78■■□□□ 1.88
SMPD1-209ENST00000533196 MYOGP15173 224 aa26.78■■□□□ 1.88
SMPD1-209ENST00000533196 ADAM17P78536 824 aa26.78■■□□□ 1.88
SMPD1-209ENST00000533196 MBTPS1Q14703 1052 aa26.78■■□□□ 1.88
SMPD1-209ENST00000533196 CEP55Q53EZ4 464 aa26.78■■□□□ 1.88
SMPD1-209ENST00000533196 RUFY3Q7L099 469 aa26.78■■□□□ 1.88
SMPD1-209ENST00000533196 SMARCAD1Q9H4L7 1026 aa26.78■■□□□ 1.88
SMPD1-209ENST00000533196 JPH1Q9HDC5 661 aaPredicted RBP26.78■■□□□ 1.88
SMPD1-209ENST00000533196 SETD4Q9NVD3 440 aa26.78■■□□□ 1.88
SMPD1-209ENST00000533196 TELO2Q9Y4R8 837 aa26.78■■□□□ 1.88
SMPD1-209ENST00000533196 CUL9Q8IWT3 2517 aa26.78■■□□□ 1.88
SMPD1-209ENST00000533196 AKAP17AQ02040 695 aaKnown RBP26.77■■□□□ 1.88
SMPD1-209ENST00000533196 NIPA1Q7RTP0 329 aa26.77■■□□□ 1.88
SMPD1-209ENST00000533196 LMBR1Q8WVP7 490 aa26.77■■□□□ 1.88
SMPD1-209ENST00000533196 SDF4Q9BRK5 362 aa26.77■■□□□ 1.88
SMPD1-209ENST00000533196 ZMYND12Q9H0C1 365 aa26.77■■□□□ 1.88
SMPD1-209ENST00000533196 ZSWIM6Q9HCJ5 1215 aa26.77■■□□□ 1.88
SMPD1-209ENST00000533196 C6orf50Q9HD87 102 aa26.77■■□□□ 1.88
SMPD1-209ENST00000533196 PPP4R2Q9NY27 417 aa26.77■■□□□ 1.88
SMPD1-209ENST00000533196 SLC9A2Q9UBY0 812 aa26.77■■□□□ 1.88
SMPD1-209ENST00000533196 MICAL3Q7RTP6 2002 aa26.77■■□□□ 1.88
SMPD1-209ENST00000533196 MEIS1O00470 390 aa26.76■■□□□ 1.87
SMPD1-209ENST00000533196 CA3P07451 260 aa26.76■■□□□ 1.87
SMPD1-209ENST00000533196 TNPO1Q92973 898 aaKnown RBP26.76■■□□□ 1.87
SMPD1-209ENST00000533196 PGBD1Q96JS3 809 aa26.76■■□□□ 1.87
SMPD1-209ENST00000533196 RNF26Q9BY78 433 aaPredicted RBP26.76■■□□□ 1.87
SMPD1-209ENST00000533196 TM6SF1Q9BZW5 370 aa26.76■■□□□ 1.87
SMPD1-209ENST00000533196 PKD2L1Q9P0L9 805 aa26.76■■□□□ 1.87
SMPD1-209ENST00000533196 CHD9Q3L8U1 2897 aa26.76■■□□□ 1.87
SMPD1-209ENST00000533196 GNA11P29992 359 aa26.75■■□□□ 1.87
SMPD1-209ENST00000533196 ARHGAP4P98171 946 aa26.75■■□□□ 1.87
SMPD1-209ENST00000533196 NTRK3Q16288 839 aa26.75■■□□□ 1.87
SMPD1-209ENST00000533196 PKN1Q16512 942 aa26.75■■□□□ 1.87
SMPD1-209ENST00000533196 TAF2Q6P1X5 1199 aa26.75■■□□□ 1.87
SMPD1-209ENST00000533196 RPAINQ86UA6 219 aa26.75■■□□□ 1.87
SMPD1-209ENST00000533196 GLG1Q92896 1179 aa26.75■■□□□ 1.87
SMPD1-209ENST00000533196 CYP46A1Q9Y6A2 500 aa26.75■■□□□ 1.87
SMPD1-209ENST00000533196 TLL1O43897 1013 aa26.74■■□□□ 1.87
SMPD1-209ENST00000533196 IFNAR1P17181 557 aa26.74■■□□□ 1.87
SMPD1-209ENST00000533196 ZNF76P36508 570 aa26.74■■□□□ 1.87
SMPD1-209ENST00000533196 PPFIA1Q13136 1202 aa26.74■■□□□ 1.87
SMPD1-209ENST00000533196 PLEKHG4Q58EX7 1191 aa26.74■■□□□ 1.87
SMPD1-209ENST00000533196 FAM26DQ5JW98 314 aa26.74■■□□□ 1.87
SMPD1-209ENST00000533196 CYP2W1Q8TAV3 490 aa26.74■■□□□ 1.87
SMPD1-209ENST00000533196 TMEM260Q9NX78 707 aa26.74■■□□□ 1.87
SMPD1-209ENST00000533196 RPLP2P05387 115 aaKnown RBP26.73■■□□□ 1.87
SMPD1-209ENST00000533196 CYP3A4P08684 503 aa26.73■■□□□ 1.87
SMPD1-209ENST00000533196 PDIA3P30101 505 aaKnown RBP26.73■■□□□ 1.87
SMPD1-209ENST00000533196 ADGRE1Q14246 886 aa26.73■■□□□ 1.87
SMPD1-209ENST00000533196 CCDC148Q8NFR7 591 aa26.73■■□□□ 1.87
SMPD1-209ENST00000533196 DBF4BQ8NFT6 615 aa26.73■■□□□ 1.87
SMPD1-209ENST00000533196 AZI2Q9H6S1 392 aa26.73■■□□□ 1.87
SMPD1-209ENST00000533196 AGO4Q9HCK5 861 aaKnown RBP26.73■■□□□ 1.87
SMPD1-209ENST00000533196 A0A0C4DFX4 3053 aa26.73■■□□□ 1.87
SMPD1-209ENST00000533196 GJB5O95377 273 aa26.72■■□□□ 1.87
SMPD1-209ENST00000533196 ARP10275 920 aa26.72■■□□□ 1.87
SMPD1-209ENST00000533196 DEFB103AP81534 67 aa26.72■■□□□ 1.87
SMPD1-209ENST00000533196 TCTN1Q2MV58 587 aa26.72■■□□□ 1.87
SMPD1-209ENST00000533196 JAKMIP3Q5VZ66 844 aa26.72■■□□□ 1.87
SMPD1-209ENST00000533196 PLPPR4Q7Z2D5 763 aa26.72■■□□□ 1.87
SMPD1-209ENST00000533196 REXO1Q8N1G1 1221 aaKnown RBP26.72■■□□□ 1.87
SMPD1-209ENST00000533196 BICD2Q8TD16 824 aa26.72■■□□□ 1.87
SMPD1-209ENST00000533196 CRYGNQ8WXF5 182 aa26.72■■□□□ 1.87
SMPD1-209ENST00000533196 SEPT8Q92599 483 aa26.72■■□□□ 1.87
SMPD1-209ENST00000533196 ZBED2Q9BTP6 218 aa26.72■■□□□ 1.87
SMPD1-209ENST00000533196 UNC80Q8N2C7 3258 aa26.71■■□□□ 1.87
SMPD1-209ENST00000533196 MBLAC1A4D2B0 266 aaPredicted RBP26.71■■□□□ 1.87
SMPD1-209ENST00000533196 RRN3P2A6NIE6 340 aa26.71■■□□□ 1.87
SMPD1-209ENST00000533196 POU3F3P20264 500 aaPredicted RBP26.71■■□□□ 1.87
SMPD1-209ENST00000533196 IGFBP4P22692 258 aa26.71■■□□□ 1.87
SMPD1-209ENST00000533196 TAP1Q03518 808 aa26.71■■□□□ 1.87
SMPD1-209ENST00000533196 MKRN4PQ13434 485 aaPredicted RBP26.71■■□□□ 1.87
SMPD1-209ENST00000533196 TOB2Q14106 344 aaPredicted RBP26.71■■□□□ 1.87
SMPD1-209ENST00000533196 GRIK4Q16099 956 aa26.71■■□□□ 1.87
SMPD1-209ENST00000533196 RSPH3Q86UC2 560 aa26.71■■□□□ 1.87
SMPD1-209ENST00000533196 PHKBQ93100 1093 aa26.71■■□□□ 1.87
SMPD1-209ENST00000533196 ZNF274Q96GC6 653 aaPredicted RBP26.71■■□□□ 1.87
SMPD1-209ENST00000533196 RAD9AQ99638 391 aa26.71■■□□□ 1.87
SMPD1-209ENST00000533196 ATG7O95352 703 aa26.7■■□□□ 1.86
SMPD1-209ENST00000533196 ACTR2P61160 394 aa26.7■■□□□ 1.86
SMPD1-209ENST00000533196 ITGB3BPQ13352 177 aaPredicted RBP26.7■■□□□ 1.86
SMPD1-209ENST00000533196 USP38Q8NB14 1042 aa26.7■■□□□ 1.86
SMPD1-209ENST00000533196 APBB2Q92870 758 aa26.7■■□□□ 1.86
SMPD1-209ENST00000533196 PCYT2Q99447 389 aa26.7■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms