RNA–Protein interactions for RNA: ENST00000532787.5

CTNND1-233, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-233ENST00000532787 TJP3O95049 919 aa8.19□□□□□ -1.1
CTNND1-233ENST00000532787 LIFRP42702 1097 aa8.19□□□□□ -1.1
CTNND1-233ENST00000532787 RCAN1P53805 252 aa8.19□□□□□ -1.1
CTNND1-233ENST00000532787 ABCB5Q2M3G0 1257 aa8.19□□□□□ -1.1
CTNND1-233ENST00000532787 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.19□□□□□ -1.1
CTNND1-233ENST00000532787 SLFN12LQ6IEE8 588 aa8.19□□□□□ -1.1
CTNND1-233ENST00000532787 C11orf57Q6ZUT1 292 aaPredicted RBP8.19□□□□□ -1.1
CTNND1-233ENST00000532787 ADAT2Q7Z6V5 191 aaKnown RBP8.19□□□□□ -1.1
CTNND1-233ENST00000532787 MB21D1Q8N884 522 aa8.19□□□□□ -1.1
CTNND1-233ENST00000532787 DEPDC1BQ8WUY9 529 aa8.19□□□□□ -1.1
CTNND1-233ENST00000532787 SLC7A3Q8WY07 619 aa8.19□□□□□ -1.1
CTNND1-233ENST00000532787 GPKOWQ92917 476 aaPredicted RBP eCLIP8.19□□□□□ -1.1
CTNND1-233ENST00000532787 CCDC127Q96BQ5 260 aa8.19□□□□□ -1.1
CTNND1-233ENST00000532787 ZBTB18Q99592 522 aa8.19□□□□□ -1.1
CTNND1-233ENST00000532787 ZNF577Q9BSK1 485 aa8.19□□□□□ -1.1
CTNND1-233ENST00000532787 GCNT4Q9P109 453 aa8.19□□□□□ -1.1
CTNND1-233ENST00000532787 TRIM33Q9UPN9 1127 aa8.19□□□□□ -1.1
CTNND1-233ENST00000532787 WDR19Q8NEZ3 1342 aa8.19□□□□□ -1.1
CTNND1-233ENST00000532787 KPNA7A9QM74 516 aa8.18□□□□□ -1.1
CTNND1-233ENST00000532787 SH2B2O14492 632 aaPredicted RBP8.18□□□□□ -1.1
CTNND1-233ENST00000532787 PDE8BO95263 885 aa8.18□□□□□ -1.1
CTNND1-233ENST00000532787 MOCS3O95396 460 aa8.18□□□□□ -1.1
CTNND1-233ENST00000532787 CCND2P30279 289 aa8.18□□□□□ -1.1
CTNND1-233ENST00000532787 EIF4A3P38919 411 aaKnown RBP8.18□□□□□ -1.1
CTNND1-233ENST00000532787 TCP10Q12799 353 aa8.18□□□□□ -1.1
CTNND1-233ENST00000532787 DRP2Q13474 957 aa8.18□□□□□ -1.1
CTNND1-233ENST00000532787 TAF1BQ53T94 588 aaPredicted RBP8.18□□□□□ -1.1
CTNND1-233ENST00000532787 ARHGEF25Q86VW2 580 aa8.18□□□□□ -1.1
CTNND1-233ENST00000532787 KCTD6Q8NC69 237 aa8.18□□□□□ -1.1
CTNND1-233ENST00000532787 GRAMD1AQ96CP6 724 aa8.18□□□□□ -1.1
CTNND1-233ENST00000532787 GCOM2Q9BZD3 368 aaPredicted RBP8.18□□□□□ -1.1
CTNND1-233ENST00000532787 ADD3Q9UEY8 706 aaKnown RBP8.18□□□□□ -1.1
CTNND1-233ENST00000532787 DNAJC5BQ9UF47 199 aa8.18□□□□□ -1.1
CTNND1-233ENST00000532787 ATP10AO60312 1499 aa8.18□□□□□ -1.1
CTNND1-233ENST00000532787 ENC1O14682 589 aa8.18□□□□□ -1.1
CTNND1-233ENST00000532787 EIF3DO15371 548 aaKnown RBP eCLIP8.18□□□□□ -1.1
CTNND1-233ENST00000532787 PRPSAP2O60256 369 aa8.18□□□□□ -1.1
CTNND1-233ENST00000532787 LDHAP00338 332 aaKnown RBP8.18□□□□□ -1.1
CTNND1-233ENST00000532787 RPSAP08865 295 aaKnown RBP8.18□□□□□ -1.1
CTNND1-233ENST00000532787 IFNA8P32881 189 aa8.18□□□□□ -1.1
CTNND1-233ENST00000532787 SF3A3Q12874 501 aaKnown RBP eCLIP8.18□□□□□ -1.12e-7■■■□□ 14.9
CTNND1-233ENST00000532787 MYO1EQ12965 1108 aa8.18□□□□□ -1.1
CTNND1-233ENST00000532787 MKRN3Q13064 507 aaKnown RBP8.18□□□□□ -1.1
CTNND1-233ENST00000532787 NAA35Q5VZE5 725 aa8.18□□□□□ -1.1
CTNND1-233ENST00000532787 TADA2BQ86TJ2 420 aa8.18□□□□□ -1.1
CTNND1-233ENST00000532787 TRIML2Q8N7C3 387 aa8.18□□□□□ -1.1
CTNND1-233ENST00000532787 PRPF38AQ8NAV1 312 aaKnown RBP8.18□□□□□ -1.1
CTNND1-233ENST00000532787 POLR3CQ9BUI4 534 aaPredicted RBP8.18□□□□□ -1.1
CTNND1-233ENST00000532787 CTIFO43310 598 aaKnown RBP8.18□□□□□ -1.1
CTNND1-233ENST00000532787 CREB3O43889 395 aa8.18□□□□□ -1.1
CTNND1-233ENST00000532787 PLS3P13797 630 aa8.18□□□□□ -1.1
CTNND1-233ENST00000532787 PHKG2P15735 406 aa8.18□□□□□ -1.1
CTNND1-233ENST00000532787 ARHGDIAP52565 204 aa8.18□□□□□ -1.1
CTNND1-233ENST00000532787 GTF2IP78347 998 aa8.18□□□□□ -1.1
CTNND1-233ENST00000532787 POLA2Q14181 598 aa8.18□□□□□ -1.1
CTNND1-233ENST00000532787 FAM133BQ5BKY9 247 aaKnown RBP8.18□□□□□ -1.1
CTNND1-233ENST00000532787 SPOUT1Q5T280 376 aaKnown RBP8.18□□□□□ -1.1
CTNND1-233ENST00000532787 HIBCHQ6NVY1 386 aaPredicted RBP8.18□□□□□ -1.1
CTNND1-233ENST00000532787 N4BP2L2Q92802 583 aaPredicted RBP8.18□□□□□ -1.1
CTNND1-233ENST00000532787 CEP72Q9P209 647 aa8.18□□□□□ -1.1
CTNND1-233ENST00000532787 STK36Q9NRP7 1315 aa8.18□□□□□ -1.1
CTNND1-233ENST00000532787 ZNF608Q9ULD9 1512 aaPredicted RBP8.18□□□□□ -1.1
CTNND1-233ENST00000532787 RFX7Q2KHR2 1363 aa8.18□□□□□ -1.1
CTNND1-233ENST00000532787 TOM1L1O75674 476 aa8.18□□□□□ -1.1
CTNND1-233ENST00000532787 GGPS1O95749 300 aa8.18□□□□□ -1.1
CTNND1-233ENST00000532787 ARL4CP56559 192 aa8.18□□□□□ -1.1
CTNND1-233ENST00000532787 RESTQ13127 1097 aa8.18□□□□□ -1.1
CTNND1-233ENST00000532787 ARL13BQ3SXY8 428 aa8.18□□□□□ -1.1
CTNND1-233ENST00000532787 PYROXD1Q8WU10 500 aa8.18□□□□□ -1.1
CTNND1-233ENST00000532787 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.18□□□□□ -1.13e-6■■■■■ 50.8
CTNND1-233ENST00000532787 VPS39Q96JC1 886 aa8.18□□□□□ -1.1
CTNND1-233ENST00000532787 LRRC37BQ96QE4 947 aa8.18□□□□□ -1.1
CTNND1-233ENST00000532787 MTA3Q9BTC8 594 aa8.18□□□□□ -1.1
CTNND1-233ENST00000532787 NDST4Q9H3R1 872 aa8.18□□□□□ -1.1
CTNND1-233ENST00000532787 PARVGQ9HBI0 331 aa8.18□□□□□ -1.1
CTNND1-233ENST00000532787 KIAA1586Q9HCI6 787 aa8.18□□□□□ -1.1
CTNND1-233ENST00000532787 EMILIN3Q9NT22 766 aa8.18□□□□□ -1.1
CTNND1-233ENST00000532787 ATP7BP35670 1465 aa8.18□□□□□ -1.1
CTNND1-233ENST00000532787 NVLO15381 856 aaKnown RBP8.18□□□□□ -1.1
CTNND1-233ENST00000532787 PNMA6AP0CW24 399 aaPredicted RBP8.18□□□□□ -1.1
CTNND1-233ENST00000532787 SAT1P21673 171 aa8.18□□□□□ -1.1
CTNND1-233ENST00000532787 RFX1P22670 979 aa8.18□□□□□ -1.1
CTNND1-233ENST00000532787 CCNA1P78396 465 aa8.18□□□□□ -1.1
CTNND1-233ENST00000532787 ARMCX2Q7L311 632 aa8.18□□□□□ -1.1
CTNND1-233ENST00000532787 DNAAF3Q8N9W5 541 aa8.18□□□□□ -1.1
CTNND1-233ENST00000532787 SMCR8Q8TEV9 937 aaPredicted RBP8.18□□□□□ -1.1
CTNND1-233ENST00000532787 KLC2Q9H0B6 622 aa8.18□□□□□ -1.1
CTNND1-233ENST00000532787 XDHP47989 1333 aa8.18□□□□□ -1.1
CTNND1-233ENST00000532787 TMEM232C9JQI7 657 aa8.17□□□□□ -1.1
CTNND1-233ENST00000532787 PPIP5K2O43314 1243 aa8.17□□□□□ -1.1
CTNND1-233ENST00000532787 TADA3O75528 432 aa8.17□□□□□ -1.1
CTNND1-233ENST00000532787 KRT38O76015 456 aa8.17□□□□□ -1.1
CTNND1-233ENST00000532787 ADD2P35612 726 aa8.17□□□□□ -1.1
CTNND1-233ENST00000532787 MXI1P50539 228 aa8.17□□□□□ -1.1
CTNND1-233ENST00000532787 CHRNDQ07001 517 aa8.17□□□□□ -1.1
CTNND1-233ENST00000532787 E2F5Q15329 346 aa8.17□□□□□ -1.1
CTNND1-233ENST00000532787 GAS2L3Q86XJ1 694 aa8.17□□□□□ -1.1
CTNND1-233ENST00000532787 GPIHBP1Q8IV16 184 aa8.17□□□□□ -1.1
CTNND1-233ENST00000532787 FAM133AQ8N9E0 248 aa8.17□□□□□ -1.1
CTNND1-233ENST00000532787 DHX36Q9H2U1 1008 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms