RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 NBPF20Q3BBV1 942 aa6.68□□□□□ -1.34
HMGB1P42-201ENST00000532126 USH1GQ495M9 461 aa6.68□□□□□ -1.34
HMGB1P42-201ENST00000532126 ARSHQ5FYA8 562 aa6.68□□□□□ -1.34
HMGB1P42-201ENST00000532126 MUM1L1Q5H9M0 696 aa6.68□□□□□ -1.34
HMGB1P42-201ENST00000532126 NSMFQ6X4W1 530 aa6.68□□□□□ -1.34
HMGB1P42-201ENST00000532126 SYNE3Q6ZMZ3 975 aa6.68□□□□□ -1.34
HMGB1P42-201ENST00000532126 RPUSD2Q8IZ73 545 aaKnown RBP6.68□□□□□ -1.34
HMGB1P42-201ENST00000532126 STAG2Q8N3U4 1231 aa6.68□□□□□ -1.34
HMGB1P42-201ENST00000532126 MSL3Q8N5Y2 521 aaKnown RBP6.68□□□□□ -1.34
HMGB1P42-201ENST00000532126 PMM1Q92871 262 aa6.68□□□□□ -1.34
HMGB1P42-201ENST00000532126 SEC16BQ96JE7 1060 aa6.68□□□□□ -1.34
HMGB1P42-201ENST00000532126 TCEANC2Q96MN5 208 aa6.68□□□□□ -1.34
HMGB1P42-201ENST00000532126 JAKMIP1Q96N16 626 aaKnown RBP6.68□□□□□ -1.34
HMGB1P42-201ENST00000532126 PURBQ96QR8 312 aaKnown RBP6.68□□□□□ -1.34
HMGB1P42-201ENST00000532126 MAP3K14Q99558 947 aa6.68□□□□□ -1.34
HMGB1P42-201ENST00000532126 SPOCK3Q9BQ16 436 aa6.68□□□□□ -1.34
HMGB1P42-201ENST00000532126 MYL10Q9BUA6 226 aa6.68□□□□□ -1.34
HMGB1P42-201ENST00000532126 LRRC2Q9BYS8 371 aa6.68□□□□□ -1.34
HMGB1P42-201ENST00000532126 NIF3L1Q9GZT8 377 aa6.68□□□□□ -1.34
HMGB1P42-201ENST00000532126 JMJD4Q9H9V9 463 aa6.68□□□□□ -1.34
HMGB1P42-201ENST00000532126 A1CFQ9NQ94 594 aaKnown RBP6.68□□□□□ -1.34
HMGB1P42-201ENST00000532126 CYP39A1Q9NYL5 469 aa6.68□□□□□ -1.34
HMGB1P42-201ENST00000532126 MAD2L2Q9UI95 211 aa6.68□□□□□ -1.34
HMGB1P42-201ENST00000532126 G3BP2Q9UN86 482 aaKnown RBP6.68□□□□□ -1.34
HMGB1P42-201ENST00000532126 CNPY2Q9Y2B0 182 aa6.68□□□□□ -1.34
HMGB1P42-201ENST00000532126 SNX14Q9Y5W7 946 aa6.68□□□□□ -1.34
HMGB1P42-201ENST00000532126 SLC12A7Q9Y666 1083 aa6.68□□□□□ -1.34
HMGB1P42-201ENST00000532126 PFASO15067 1338 aa6.68□□□□□ -1.34
HMGB1P42-201ENST00000532126 MGAMO43451 1857 aa6.68□□□□□ -1.34
HMGB1P42-201ENST00000532126 PTPDC1A2A3K4 754 aa6.67□□□□□ -1.34
HMGB1P42-201ENST00000532126 ESPNB1AK53 854 aa6.67□□□□□ -1.34
HMGB1P42-201ENST00000532126 NFIBO00712 420 aa6.67□□□□□ -1.34
HMGB1P42-201ENST00000532126 ZBTB5O15062 677 aa6.67□□□□□ -1.34
HMGB1P42-201ENST00000532126 MSCO60682 206 aa6.67□□□□□ -1.34
HMGB1P42-201ENST00000532126 CYBAP13498 195 aa6.67□□□□□ -1.34
HMGB1P42-201ENST00000532126 GNAQP50148 359 aa6.67□□□□□ -1.34
HMGB1P42-201ENST00000532126 CHMP4BP1P59074 171 aa6.67□□□□□ -1.34
HMGB1P42-201ENST00000532126 COPS2P61201 443 aa6.67□□□□□ -1.34
HMGB1P42-201ENST00000532126 LSM11P83369 360 aaKnown RBP eCLIP6.67□□□□□ -1.34
HMGB1P42-201ENST00000532126 CNTN2Q02246 1040 aa6.67□□□□□ -1.34
HMGB1P42-201ENST00000532126 NFX1Q12986 1120 aaKnown RBP6.67□□□□□ -1.34
HMGB1P42-201ENST00000532126 TRAF1Q13077 416 aa6.67□□□□□ -1.34
HMGB1P42-201ENST00000532126 BAATQ14032 418 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P42-201ENST00000532126 AGERQ15109 404 aa6.67□□□□□ -1.34
HMGB1P42-201ENST00000532126 QRICH1Q2TAL8 776 aa6.67□□□□□ -1.34
HMGB1P42-201ENST00000532126 PRAMEF19Q5SWL8 479 aa6.67□□□□□ -1.34
HMGB1P42-201ENST00000532126 BLOC1S2Q6QNY1 142 aa6.67□□□□□ -1.34
HMGB1P42-201ENST00000532126 MAMDC4Q6UXC1 1216 aa6.67□□□□□ -1.34
HMGB1P42-201ENST00000532126 RNF207Q6ZRF8 634 aa6.67□□□□□ -1.34
HMGB1P42-201ENST00000532126 FBXO11Q86XK2 927 aa6.67□□□□□ -1.34
HMGB1P42-201ENST00000532126 HOMER1Q86YM7 354 aa6.67□□□□□ -1.34
HMGB1P42-201ENST00000532126 CCDC144CPQ8IYA2 1237 aa6.67□□□□□ -1.34
HMGB1P42-201ENST00000532126 FAM133AQ8N9E0 248 aa6.67□□□□□ -1.34
HMGB1P42-201ENST00000532126 TRPV1Q8NER1 839 aa6.67□□□□□ -1.34
HMGB1P42-201ENST00000532126 CLEC4DQ8WXI8 215 aa6.67□□□□□ -1.34
HMGB1P42-201ENST00000532126 WNT2BQ93097 391 aa6.67□□□□□ -1.34
HMGB1P42-201ENST00000532126 MARVELD3Q96A59 401 aa6.67□□□□□ -1.34
HMGB1P42-201ENST00000532126 SHISA4Q96DD7 197 aa6.67□□□□□ -1.34
HMGB1P42-201ENST00000532126 RNPC3Q96LT9 517 aaKnown RBP6.67□□□□□ -1.34
HMGB1P42-201ENST00000532126 LZTS2Q9BRK4 669 aa6.67□□□□□ -1.34
HMGB1P42-201ENST00000532126 AMNQ9BXJ7 453 aa6.67□□□□□ -1.34
HMGB1P42-201ENST00000532126 USP26Q9BXU7 913 aa6.67□□□□□ -1.34
HMGB1P42-201ENST00000532126 TRIM55Q9BYV6 548 aa6.67□□□□□ -1.34
HMGB1P42-201ENST00000532126 DDX20Q9UHI6 824 aaKnown RBP6.67□□□□□ -1.34
HMGB1P42-201ENST00000532126 NRBP1Q9UHY1 535 aa6.67□□□□□ -1.34
HMGB1P42-201ENST00000532126 ABCB11O95342 1321 aa6.67□□□□□ -1.34
HMGB1P42-201ENST00000532126 SYNGAP1Q96PV0 1343 aa6.67□□□□□ -1.34
HMGB1P42-201ENST00000532126 PLXNB2O15031 1838 aa6.66□□□□□ -1.34
HMGB1P42-201ENST00000532126 PARP14Q460N5 1801 aa6.66□□□□□ -1.34
HMGB1P42-201ENST00000532126 ZNF236Q9UL36 1845 aa6.66□□□□□ -1.34
HMGB1P42-201ENST00000532126 ASB14A6NK59 587 aa6.66□□□□□ -1.34
HMGB1P42-201ENST00000532126 BACH1O14867 736 aa6.66□□□□□ -1.34
HMGB1P42-201ENST00000532126 GIPC1O14908 333 aa6.66□□□□□ -1.34
HMGB1P42-201ENST00000532126 SEPT4O43236 478 aa6.66□□□□□ -1.34
HMGB1P42-201ENST00000532126 ZBTB43O43298 467 aa6.66□□□□□ -1.34
HMGB1P42-201ENST00000532126 ST18O60284 1047 aa6.66□□□□□ -1.34
HMGB1P42-201ENST00000532126 FARP2O94887 1054 aaPredicted RBP6.66□□□□□ -1.34
HMGB1P42-201ENST00000532126 SNAI1O95863 264 aaPredicted RBP6.66□□□□□ -1.34
HMGB1P42-201ENST00000532126 PDGFRBP09619 1106 aa6.66□□□□□ -1.34
HMGB1P42-201ENST00000532126 CTSHP09668 335 aa6.66□□□□□ -1.34
HMGB1P42-201ENST00000532126 CPA1P15085 419 aa6.66□□□□□ -1.34
HMGB1P42-201ENST00000532126 RXRAP19793 462 aa6.66□□□□□ -1.34
HMGB1P42-201ENST00000532126 CASTP20810 708 aaKnown RBP6.66□□□□□ -1.34
HMGB1P42-201ENST00000532126 RPS6KB1P23443 525 aa6.66□□□□□ -1.34
HMGB1P42-201ENST00000532126 CALML3P27482 149 aa6.66□□□□□ -1.34
HMGB1P42-201ENST00000532126 SMARCA1P28370 1054 aa6.66□□□□□ -1.34
HMGB1P42-201ENST00000532126 TBX4P57082 545 aa6.66□□□□□ -1.34
HMGB1P42-201ENST00000532126 SETQ01105 290 aaPredicted RBP6.66□□□□□ -1.34
HMGB1P42-201ENST00000532126 PAK2Q13177 524 aa6.66□□□□□ -1.34
HMGB1P42-201ENST00000532126 PTCRAQ6ISU1 281 aaPredicted RBP6.66□□□□□ -1.34
HMGB1P42-201ENST00000532126 APOA5Q6Q788 366 aa6.66□□□□□ -1.34
HMGB1P42-201ENST00000532126 SLC30A10Q6XR72 485 aa6.66□□□□□ -1.34
HMGB1P42-201ENST00000532126 APBB1IPQ7Z5R6 666 aaPredicted RBP6.66□□□□□ -1.34
HMGB1P42-201ENST00000532126 SGMS1Q86VZ5 419 aa6.66□□□□□ -1.34
HMGB1P42-201ENST00000532126 BPHLQ86WA6 291 aaPredicted RBP6.66□□□□□ -1.34
HMGB1P42-201ENST00000532126 MICU3Q86XE3 530 aa6.66□□□□□ -1.34
HMGB1P42-201ENST00000532126 RAB11FIP4Q86YS3 637 aa6.66□□□□□ -1.34
HMGB1P42-201ENST00000532126 FMNL3Q8IVF7 1028 aa6.66□□□□□ -1.34
HMGB1P42-201ENST00000532126 ANKLE1Q8NAG6 615 aa6.66□□□□□ -1.34
HMGB1P42-201ENST00000532126 FANCBQ8NB91 859 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms