RNA–Protein interactions for RNA: ENST00000531539.5

FOXR1-202, Transcript of forkhead box R1, humanhuman

TSL 1 (best)

Gene FOXR1, Length 1,053 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-202ENST00000531539 RNPEPQ9H4A4 650 aa16.44■□□□□ 0.22
FOXR1-202ENST00000531539 SCN10AQ9Y5Y9 1956 aa16.44■□□□□ 0.22
FOXR1-202ENST00000531539 NFASCO94856 1347 aa16.44■□□□□ 0.22
FOXR1-202ENST00000531539 CCDC194A0A1B0GVG4 234 aa16.43■□□□□ 0.22
FOXR1-202ENST00000531539 C17orf102A2RUQ5 167 aa16.43■□□□□ 0.22
FOXR1-202ENST00000531539 M0R2N6 131 aa16.43■□□□□ 0.22
FOXR1-202ENST00000531539 IPO5O00410 1097 aaKnown RBP16.43■□□□□ 0.22
FOXR1-202ENST00000531539 SMIM10L2AP0DMW4 78 aa16.43■□□□□ 0.22
FOXR1-202ENST00000531539 SMIM10L2BP0DMW5 78 aa16.43■□□□□ 0.22
FOXR1-202ENST00000531539 ACTR2P61160 394 aa16.43■□□□□ 0.22
FOXR1-202ENST00000531539 ST3GAL1Q11201 340 aa16.43■□□□□ 0.22
FOXR1-202ENST00000531539 BFSP2Q13515 415 aa16.43■□□□□ 0.22
FOXR1-202ENST00000531539 HIC1Q14526 733 aa16.43■□□□□ 0.22
FOXR1-202ENST00000531539 KRT25Q7Z3Z0 450 aa16.43■□□□□ 0.22
FOXR1-202ENST00000531539 OXER1Q8TDS5 423 aa16.43■□□□□ 0.22
FOXR1-202ENST00000531539 SMARCAD1Q9H4L7 1026 aa16.43■□□□□ 0.22
FOXR1-202ENST00000531539 AZI2Q9H6S1 392 aa16.43■□□□□ 0.22
FOXR1-202ENST00000531539 SETD4Q9NVD3 440 aa16.43■□□□□ 0.22
FOXR1-202ENST00000531539 ZNF215Q9UL58 517 aaPredicted RBP16.43■□□□□ 0.22
FOXR1-202ENST00000531539 SOX1O00570 391 aaPredicted RBP16.42■□□□□ 0.22
FOXR1-202ENST00000531539 DHX15O43143 795 aaKnown RBP16.42■□□□□ 0.22
FOXR1-202ENST00000531539 ST18O60284 1047 aa16.42■□□□□ 0.22
FOXR1-202ENST00000531539 FGBP02675 491 aa16.42■□□□□ 0.22
FOXR1-202ENST00000531539 MARK3P27448 753 aa16.42■□□□□ 0.22
FOXR1-202ENST00000531539 TRIM29Q14134 588 aa16.42■□□□□ 0.22
FOXR1-202ENST00000531539 INF2Q27J81 1249 aa16.42■□□□□ 0.22
FOXR1-202ENST00000531539 ZNF365Q70YC5 407 aa16.42■□□□□ 0.22
FOXR1-202ENST00000531539 RPUSD2Q8IZ73 545 aaKnown RBP16.42■□□□□ 0.22
FOXR1-202ENST00000531539 ATP6V0A1Q93050 837 aa16.42■□□□□ 0.22
FOXR1-202ENST00000531539 CTAGE1Q96RT6 745 aa16.42■□□□□ 0.22
FOXR1-202ENST00000531539 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.42■□□□□ 0.22
FOXR1-202ENST00000531539 WNT8AQ9H1J5 351 aa16.42■□□□□ 0.22
FOXR1-202ENST00000531539 IL23AQ9NPF7 189 aa16.42■□□□□ 0.22
FOXR1-202ENST00000531539 SH2B1Q9NRF2 756 aaPredicted RBP16.42■□□□□ 0.22
FOXR1-202ENST00000531539 TBC1D22BQ9NU19 505 aa16.42■□□□□ 0.22
FOXR1-202ENST00000531539 DOCK5Q9H7D0 1870 aa16.42■□□□□ 0.22
FOXR1-202ENST00000531539 MSH4O15457 936 aa16.41■□□□□ 0.22
FOXR1-202ENST00000531539 CCNE2O96020 404 aa16.41■□□□□ 0.22
FOXR1-202ENST00000531539 STAT5BP51692 787 aa16.41■□□□□ 0.22
FOXR1-202ENST00000531539 SETQ01105 290 aaPredicted RBP16.41■□□□□ 0.22
FOXR1-202ENST00000531539 PTK7Q13308 1070 aa16.41■□□□□ 0.22
FOXR1-202ENST00000531539 LRIT3Q3SXY7 679 aa16.41■□□□□ 0.22
FOXR1-202ENST00000531539 TMEM240Q5SV17 173 aa16.41■□□□□ 0.22
FOXR1-202ENST00000531539 PIK3AP1Q6ZUJ8 805 aa16.41■□□□□ 0.22
FOXR1-202ENST00000531539 DEFB128Q7Z7B8 93 aa16.41■□□□□ 0.22
FOXR1-202ENST00000531539 CCDC155Q8N6L0 562 aa16.41■□□□□ 0.22
FOXR1-202ENST00000531539 DHX38Q92620 1227 aaKnown RBP16.41■□□□□ 0.22
FOXR1-202ENST00000531539 RNPC3Q96LT9 517 aaKnown RBP16.41■□□□□ 0.22
FOXR1-202ENST00000531539 TBC1D32Q96NH3 1257 aa16.41■□□□□ 0.22
FOXR1-202ENST00000531539 PCYT2Q99447 389 aa16.41■□□□□ 0.22
FOXR1-202ENST00000531539 LLPHQ9BRT6 129 aaKnown RBP16.41■□□□□ 0.22
FOXR1-202ENST00000531539 BACH2Q9BYV9 841 aa16.41■□□□□ 0.22
FOXR1-202ENST00000531539 ERAP1Q9NZ08 941 aa16.41■□□□□ 0.22
FOXR1-202ENST00000531539 BACH1O14867 736 aa16.4■□□□□ 0.22
FOXR1-202ENST00000531539 TREHO43280 583 aa16.4■□□□□ 0.22
FOXR1-202ENST00000531539 LGR5O75473 907 aa16.4■□□□□ 0.22
FOXR1-202ENST00000531539 ATG7O95352 703 aa16.4■□□□□ 0.22
FOXR1-202ENST00000531539 TDP2O95551 362 aa16.4■□□□□ 0.22
FOXR1-202ENST00000531539 IQCF3P0C7M6 154 aa16.4■□□□□ 0.22
FOXR1-202ENST00000531539 GNAT1P11488 350 aa16.4■□□□□ 0.22
FOXR1-202ENST00000531539 KRT2P35908 639 aa16.4■□□□□ 0.22
FOXR1-202ENST00000531539 LETM2Q2VYF4 491 aa16.4■□□□□ 0.22
FOXR1-202ENST00000531539 KRT40Q6A162 431 aa16.4■□□□□ 0.22
FOXR1-202ENST00000531539 SWSAP1Q6NVH7 229 aa16.4■□□□□ 0.22
FOXR1-202ENST00000531539 ABHD15Q6UXT9 468 aa16.4■□□□□ 0.22
FOXR1-202ENST00000531539 LENG9Q96B70 501 aa16.4■□□□□ 0.22
FOXR1-202ENST00000531539 LRCH3Q96II8 777 aa16.4■□□□□ 0.22
FOXR1-202ENST00000531539 BRMS1Q9HCU9 246 aa16.4■□□□□ 0.22
FOXR1-202ENST00000531539 CYP3A7-CYP3A51PA0A087WV96 503 aa16.39■□□□□ 0.21
FOXR1-202ENST00000531539 BTBD18B2RXH4 712 aa16.39■□□□□ 0.21
FOXR1-202ENST00000531539 PITPNM1O00562 1244 aa16.39■□□□□ 0.21
FOXR1-202ENST00000531539 CYP3A7P24462 503 aa16.39■□□□□ 0.21
FOXR1-202ENST00000531539 GUCY1B3Q02153 619 aa16.39■□□□□ 0.21
FOXR1-202ENST00000531539 NR5A1Q13285 461 aa16.39■□□□□ 0.21
FOXR1-202ENST00000531539 Q4G0T1 1027 aa16.39■□□□□ 0.21
FOXR1-202ENST00000531539 MIS18BP1Q6P0N0 1132 aa16.39■□□□□ 0.21
FOXR1-202ENST00000531539 PLPPR4Q7Z2D5 763 aa16.39■□□□□ 0.21
FOXR1-202ENST00000531539 CAGE1Q8TC20 777 aa16.39■□□□□ 0.21
FOXR1-202ENST00000531539 GJA10Q969M2 543 aa16.39■□□□□ 0.21
FOXR1-202ENST00000531539 FTOQ9C0B1 505 aaKnown RBP eCLIP16.39■□□□□ 0.21
FOXR1-202ENST00000531539 TCEAL9Q9UHQ7 104 aa16.39■□□□□ 0.21
FOXR1-202ENST00000531539 SAMM50Q9Y512 469 aa16.39■□□□□ 0.21
FOXR1-202ENST00000531539 LTBP2Q14767 1821 aa16.38■□□□□ 0.21
FOXR1-202ENST00000531539 MMP1P03956 469 aa16.38■□□□□ 0.21
FOXR1-202ENST00000531539 CKBP12277 381 aa16.38■□□□□ 0.21
FOXR1-202ENST00000531539 SELPP16109 830 aa16.38■□□□□ 0.21
FOXR1-202ENST00000531539 THPOP40225 353 aa16.38■□□□□ 0.21
FOXR1-202ENST00000531539 IGBP1P78318 339 aa16.38■□□□□ 0.21
FOXR1-202ENST00000531539 PPFIA1Q13136 1202 aa16.38■□□□□ 0.21
FOXR1-202ENST00000531539 EARS2Q5JPH6 523 aaKnown RBP16.38■□□□□ 0.21
FOXR1-202ENST00000531539 FAM160B1Q5W0V3 765 aa16.38■□□□□ 0.21
FOXR1-202ENST00000531539 PSRC1Q6PGN9 363 aaPredicted RBP16.38■□□□□ 0.21
FOXR1-202ENST00000531539 OTOP2Q7RTS6 562 aa16.38■□□□□ 0.21
FOXR1-202ENST00000531539 NEK8Q86SG6 692 aa16.38■□□□□ 0.21
FOXR1-202ENST00000531539 SERINC5Q86VE9 423 aa16.38■□□□□ 0.21
FOXR1-202ENST00000531539 FAM184AQ8NB25 1140 aa16.38■□□□□ 0.21
FOXR1-202ENST00000531539 AFAP1L1Q8TED9 768 aa16.38■□□□□ 0.21
FOXR1-202ENST00000531539 WNT8BQ93098 351 aa16.38■□□□□ 0.21
FOXR1-202ENST00000531539 ZNF302Q9NR11 478 aa16.38■□□□□ 0.21
FOXR1-202ENST00000531539 DDX25Q9UHL0 483 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms