RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 ZNF215Q9UL58 517 aaPredicted RBP23.87■■□□□ 1.41
TSPAN4-219ENST00000530404 C5orf42Q9H799 3197 aa23.87■■□□□ 1.41
TSPAN4-219ENST00000530404 WDR81Q562E7 1941 aa23.86■■□□□ 1.41
TSPAN4-219ENST00000530404 HTRA4P83105 476 aaPredicted RBP23.86■■□□□ 1.41
TSPAN4-219ENST00000530404 NLRX1Q86UT6 975 aa23.86■■□□□ 1.41
TSPAN4-219ENST00000530404 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.85■■□□□ 1.41
TSPAN4-219ENST00000530404 GNAT1P11488 350 aa23.85■■□□□ 1.41
TSPAN4-219ENST00000530404 MARK3P27448 753 aa23.85■■□□□ 1.41
TSPAN4-219ENST00000530404 SMARCA1P28370 1054 aa23.85■■□□□ 1.41
TSPAN4-219ENST00000530404 TCF7P36402 384 aaPredicted RBP23.85■■□□□ 1.41
TSPAN4-219ENST00000530404 GNAQP50148 359 aa23.85■■□□□ 1.41
TSPAN4-219ENST00000530404 ADAM17P78536 824 aa23.85■■□□□ 1.41
TSPAN4-219ENST00000530404 RUFY4Q6ZNE9 571 aa23.85■■□□□ 1.41
TSPAN4-219ENST00000530404 TMEM87BQ96K49 555 aa23.85■■□□□ 1.41
TSPAN4-219ENST00000530404 SENP7Q9BQF6 1050 aa23.85■■□□□ 1.41
TSPAN4-219ENST00000530404 LZTS2Q9BRK4 669 aa23.85■■□□□ 1.41
TSPAN4-219ENST00000530404 PSTPIP2Q9H939 334 aa23.85■■□□□ 1.41
TSPAN4-219ENST00000530404 TTC3P53804 2025 aa23.84■■□□□ 1.41
TSPAN4-219ENST00000530404 MYH9P35579 1960 aaKnown RBP23.84■■□□□ 1.41
TSPAN4-219ENST00000530404 KCNA2P16389 499 aa23.84■■□□□ 1.41
TSPAN4-219ENST00000530404 CREB3L3Q68CJ9 461 aa23.84■■□□□ 1.41
TSPAN4-219ENST00000530404 XRRA1Q6P2D8 792 aa23.84■■□□□ 1.41
TSPAN4-219ENST00000530404 SP7Q8TDD2 431 aaPredicted RBP23.84■■□□□ 1.41
TSPAN4-219ENST00000530404 YME1L1Q96TA2 773 aa23.84■■□□□ 1.41
TSPAN4-219ENST00000530404 ESYT1Q9BSJ8 1104 aa23.84■■□□□ 1.41
TSPAN4-219ENST00000530404 CAND2O75155 1236 aa23.83■■□□□ 1.41
TSPAN4-219ENST00000530404 ITGB5P18084 799 aa23.83■■□□□ 1.41
TSPAN4-219ENST00000530404 SKAP1Q86WV1 359 aa23.83■■□□□ 1.41
TSPAN4-219ENST00000530404 TOP1MTQ969P6 601 aa23.83■■□□□ 1.41
TSPAN4-219ENST00000530404 GPRASP2Q96D09 838 aa23.83■■□□□ 1.41
TSPAN4-219ENST00000530404 MTA3Q9BTC8 594 aa23.83■■□□□ 1.41
TSPAN4-219ENST00000530404 GSTTP1A0A1W2PQM5 241 aa23.82■■□□□ 1.4
TSPAN4-219ENST00000530404 CHRNA1P02708 482 aa23.82■■□□□ 1.4
TSPAN4-219ENST00000530404 EPC2Q52LR7 807 aa23.82■■□□□ 1.4
TSPAN4-219ENST00000530404 MICU3Q86XE3 530 aa23.82■■□□□ 1.4
TSPAN4-219ENST00000530404 TMTC2Q8N394 836 aa23.82■■□□□ 1.4
TSPAN4-219ENST00000530404 IFIH1Q9BYX4 1025 aaKnown RBP23.82■■□□□ 1.4
TSPAN4-219ENST00000530404 EPHX3Q9H6B9 360 aa23.82■■□□□ 1.4
TSPAN4-219ENST00000530404 UBE2ZQ9H832 354 aaPredicted RBP23.82■■□□□ 1.4
TSPAN4-219ENST00000530404 SLC12A7Q9Y666 1083 aa23.82■■□□□ 1.4
TSPAN4-219ENST00000530404 COL4A6Q14031 1691 aa23.82■■□□□ 1.4
TSPAN4-219ENST00000530404 CALM1P0DP23 149 aa23.81■■□□□ 1.4
TSPAN4-219ENST00000530404 CALM2P0DP24 149 aa23.81■■□□□ 1.4
TSPAN4-219ENST00000530404 CALM3P0DP25 149 aa23.81■■□□□ 1.4
TSPAN4-219ENST00000530404 GHRP10912 638 aa23.81■■□□□ 1.4
TSPAN4-219ENST00000530404 LIFRP42702 1097 aa23.81■■□□□ 1.4
TSPAN4-219ENST00000530404 NECTIN1Q15223 517 aa23.81■■□□□ 1.4
TSPAN4-219ENST00000530404 FAM26DQ5JW98 314 aa23.81■■□□□ 1.4
TSPAN4-219ENST00000530404 TMTC3Q6ZXV5 915 aa23.81■■□□□ 1.4
TSPAN4-219ENST00000530404 HEATR3Q7Z4Q2 680 aa23.81■■□□□ 1.4
TSPAN4-219ENST00000530404 GIMAP8Q8ND71 665 aaPredicted RBP23.81■■□□□ 1.4
TSPAN4-219ENST00000530404 KHSRPQ92945 711 aaKnown RBP eCLIP23.81■■□□□ 1.4
TSPAN4-219ENST00000530404 ZBTB10Q96DT7 871 aa23.81■■□□□ 1.4
TSPAN4-219ENST00000530404 ANO2Q9NQ90 1003 aa23.81■■□□□ 1.4
TSPAN4-219ENST00000530404 PCDHA6Q9UN73 950 aa23.81■■□□□ 1.4
TSPAN4-219ENST00000530404 PCDHA8Q9Y5H6 950 aa23.81■■□□□ 1.4
TSPAN4-219ENST00000530404 UBIAD1Q9Y5Z9 338 aa23.81■■□□□ 1.4
TSPAN4-219ENST00000530404 NRCAMQ92823 1304 aa23.81■■□□□ 1.4
TSPAN4-219ENST00000530404 PPFIA1Q13136 1202 aa23.8■■□□□ 1.4
TSPAN4-219ENST00000530404 MTMR1Q13613 665 aa23.8■■□□□ 1.4
TSPAN4-219ENST00000530404 FANCBQ8NB91 859 aa23.8■■□□□ 1.4
TSPAN4-219ENST00000530404 SEPT1Q8WYJ6 367 aa23.8■■□□□ 1.4
TSPAN4-219ENST00000530404 SPDYE3A6NKU9 549 aa23.79■■□□□ 1.4
TSPAN4-219ENST00000530404 KCNA5P22460 613 aa23.79■■□□□ 1.4
TSPAN4-219ENST00000530404 IGBP1P78318 339 aa23.79■■□□□ 1.4
TSPAN4-219ENST00000530404 MGAT3Q09327 533 aa23.79■■□□□ 1.4
TSPAN4-219ENST00000530404 GRIK4Q16099 956 aa23.79■■□□□ 1.4
TSPAN4-219ENST00000530404 DNAJB3Q8WWF6 145 aa23.79■■□□□ 1.4
TSPAN4-219ENST00000530404 APBB2Q92870 758 aa23.79■■□□□ 1.4
TSPAN4-219ENST00000530404 GLG1Q92896 1179 aa23.79■■□□□ 1.4
TSPAN4-219ENST00000530404 PGBD1Q96JS3 809 aa23.79■■□□□ 1.4
TSPAN4-219ENST00000530404 TCEANC2Q96MN5 208 aa23.79■■□□□ 1.4
TSPAN4-219ENST00000530404 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.78■■□□□ 1.4
TSPAN4-219ENST00000530404 GPM6BQ13491 265 aa23.78■■□□□ 1.4
TSPAN4-219ENST00000530404 TMEM192Q8IY95 271 aa23.78■■□□□ 1.4
TSPAN4-219ENST00000530404 MRPL38Q96DV4 380 aaKnown RBP23.78■■□□□ 1.4
TSPAN4-219ENST00000530404 CDHR1Q96JP9 859 aa23.78■■□□□ 1.4
TSPAN4-219ENST00000530404 CD320Q9NPF0 282 aa23.78■■□□□ 1.4
TSPAN4-219ENST00000530404 JADE2Q9NQC1 790 aa23.78■■□□□ 1.4
TSPAN4-219ENST00000530404 ERAP1Q9NZ08 941 aa23.78■■□□□ 1.4
TSPAN4-219ENST00000530404 TUBE1Q9UJT0 475 aa23.78■■□□□ 1.4
TSPAN4-219ENST00000530404 CNTNAP5Q8WYK1 1306 aa23.78■■□□□ 1.4
TSPAN4-219ENST00000530404 LPIN1Q14693 890 aa23.77■■□□□ 1.4
TSPAN4-219ENST00000530404 WWC2Q6AWC2 1192 aa23.77■■□□□ 1.4
TSPAN4-219ENST00000530404 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.77■■□□□ 1.4
TSPAN4-219ENST00000530404 SAMD11Q96NU1 681 aa23.77■■□□□ 1.4
TSPAN4-219ENST00000530404 C1QTNF1Q9BXJ1 281 aa23.77■■□□□ 1.4
TSPAN4-219ENST00000530404 PLXNA4Q9HCM2 1894 aa23.77■■□□□ 1.4
TSPAN4-219ENST00000530404 H3BNC9 293 aa23.76■■□□□ 1.39
TSPAN4-219ENST00000530404 MARCH8Q5T0T0 291 aa23.76■■□□□ 1.39
TSPAN4-219ENST00000530404 TYW1BQ6NUM6 668 aa23.76■■□□□ 1.39
TSPAN4-219ENST00000530404 TAF2Q6P1X5 1199 aa23.76■■□□□ 1.39
TSPAN4-219ENST00000530404 CYP2W1Q8TAV3 490 aa23.76■■□□□ 1.39
TSPAN4-219ENST00000530404 PCYT2Q99447 389 aa23.76■■□□□ 1.39
TSPAN4-219ENST00000530404 EHMT1Q9H9B1 1298 aa23.76■■□□□ 1.39
TSPAN4-219ENST00000530404 CDY2AQ9Y6F7 541 aa23.76■■□□□ 1.39
TSPAN4-219ENST00000530404 FNDC1Q4ZHG4 1894 aaPredicted RBP23.76■■□□□ 1.39
TSPAN4-219ENST00000530404 IL9P15248 144 aa23.75■■□□□ 1.39
TSPAN4-219ENST00000530404 PTPROQ16827 1216 aa23.75■■□□□ 1.39
TSPAN4-219ENST00000530404 LEXMQ3ZCV2 418 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms