RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 INF2Q27J81 1249 aa14.39□□□□□ -0.11
CCDC90B-216ENST00000529856 UTP14CQ5TAP6 766 aaKnown RBP14.39□□□□□ -0.11
CCDC90B-216ENST00000529856 KRT40Q6A162 431 aa14.39□□□□□ -0.11
CCDC90B-216ENST00000529856 GDF6Q6KF10 455 aaPredicted RBP14.39□□□□□ -0.11
CCDC90B-216ENST00000529856 MOXD1Q6UVY6 613 aa14.39□□□□□ -0.11
CCDC90B-216ENST00000529856 C7orf31Q8N865 590 aa14.39□□□□□ -0.11
CCDC90B-216ENST00000529856 TNFRSF25Q93038 417 aa14.39□□□□□ -0.11
CCDC90B-216ENST00000529856 ZNF577Q9BSK1 485 aa14.39□□□□□ -0.11
CCDC90B-216ENST00000529856 UBE2OQ9C0C9 1292 aaKnown RBP14.39□□□□□ -0.11
CCDC90B-216ENST00000529856 TBC1D22BQ9NU19 505 aa14.39□□□□□ -0.11
CCDC90B-216ENST00000529856 GTF2IRD1Q9UHL9 959 aa14.39□□□□□ -0.11
CCDC90B-216ENST00000529856 ABCB7O75027 752 aa14.38□□□□□ -0.11
CCDC90B-216ENST00000529856 ATG7O95352 703 aa14.38□□□□□ -0.11
CCDC90B-216ENST00000529856 CYP2C9P11712 490 aa14.38□□□□□ -0.11
CCDC90B-216ENST00000529856 FOSBP53539 338 aa14.38□□□□□ -0.11
CCDC90B-216ENST00000529856 ACTR2P61160 394 aa14.38□□□□□ -0.11
CCDC90B-216ENST00000529856 NR5A1Q13285 461 aa14.38□□□□□ -0.11
CCDC90B-216ENST00000529856 PTGISQ16647 500 aa14.38□□□□□ -0.11
CCDC90B-216ENST00000529856 Q4G0T1 1027 aa14.38□□□□□ -0.11
CCDC90B-216ENST00000529856 EARS2Q5JPH6 523 aaKnown RBP14.38□□□□□ -0.11
CCDC90B-216ENST00000529856 PIK3AP1Q6ZUJ8 805 aa14.38□□□□□ -0.11
CCDC90B-216ENST00000529856 TRIM50Q86XT4 487 aa14.38□□□□□ -0.11
CCDC90B-216ENST00000529856 MBOAT7Q96N66 472 aa14.38□□□□□ -0.11
CCDC90B-216ENST00000529856 UIMC1Q96RL1 719 aa14.38□□□□□ -0.11
CCDC90B-216ENST00000529856 CTAGE1Q96RT6 745 aa14.38□□□□□ -0.11
CCDC90B-216ENST00000529856 NOC4LQ9BVI4 516 aaKnown RBP14.38□□□□□ -0.11
CCDC90B-216ENST00000529856 HIPK3Q9H422 1215 aa14.38□□□□□ -0.11
CCDC90B-216ENST00000529856 BRMS1Q9HCU9 246 aa14.38□□□□□ -0.11
CCDC90B-216ENST00000529856 ZNF215Q9UL58 517 aaPredicted RBP14.38□□□□□ -0.11
CCDC90B-216ENST00000529856 A0A1W2PPC1 479 aa14.37□□□□□ -0.11
CCDC90B-216ENST00000529856 BTBD18B2RXH4 712 aa14.37□□□□□ -0.11
CCDC90B-216ENST00000529856 DDX39AO00148 427 aaKnown RBP14.37□□□□□ -0.11
CCDC90B-216ENST00000529856 MSH4O15457 936 aa14.37□□□□□ -0.11
CCDC90B-216ENST00000529856 LGR5O75473 907 aa14.37□□□□□ -0.11
CCDC90B-216ENST00000529856 TDP2O95551 362 aa14.37□□□□□ -0.11
CCDC90B-216ENST00000529856 CCNE2O96020 404 aa14.37□□□□□ -0.11
CCDC90B-216ENST00000529856 CYP2C18P33260 490 aa14.37□□□□□ -0.11
CCDC90B-216ENST00000529856 HABP4Q5JVS0 413 aaKnown RBP14.37□□□□□ -0.11
CCDC90B-216ENST00000529856 MFSD5Q6N075 450 aa14.37□□□□□ -0.11
CCDC90B-216ENST00000529856 NEK8Q86SG6 692 aa14.37□□□□□ -0.11
CCDC90B-216ENST00000529856 DIS3L2Q8IYB7 885 aaKnown RBP14.37□□□□□ -0.11
CCDC90B-216ENST00000529856 FAM184AQ8NB25 1140 aa14.37□□□□□ -0.11
CCDC90B-216ENST00000529856 C8orf76Q96K31 380 aa14.37□□□□□ -0.11
CCDC90B-216ENST00000529856 PCYT2Q99447 389 aa14.37□□□□□ -0.11
CCDC90B-216ENST00000529856 PPP1R12CQ9BZL4 782 aa14.37□□□□□ -0.11
CCDC90B-216ENST00000529856 RNPEPQ9H4A4 650 aa14.37□□□□□ -0.11
CCDC90B-216ENST00000529856 SMARCAD1Q9H4L7 1026 aa14.37□□□□□ -0.11
CCDC90B-216ENST00000529856 NOD1Q9Y239 953 aa14.37□□□□□ -0.11
CCDC90B-216ENST00000529856 IGKV6D-21A0A0A0MT36 114 aa14.36□□□□□ -0.11
CCDC90B-216ENST00000529856 SMIM10L2AP0DMW4 78 aa14.36□□□□□ -0.11
CCDC90B-216ENST00000529856 SMIM10L2BP0DMW5 78 aa14.36□□□□□ -0.11
CCDC90B-216ENST00000529856 HOXC8P31273 242 aa14.36□□□□□ -0.11
CCDC90B-216ENST00000529856 GUCY1B3Q02153 619 aa14.36□□□□□ -0.11
CCDC90B-216ENST00000529856 HIC1Q14526 733 aa14.36□□□□□ -0.11
CCDC90B-216ENST00000529856 LETM2Q2VYF4 491 aa14.36□□□□□ -0.11
CCDC90B-216ENST00000529856 PPP4R3AQ6IN85 833 aa14.36□□□□□ -0.11
CCDC90B-216ENST00000529856 ZNF746Q6NUN9 644 aaPredicted RBP14.36□□□□□ -0.11
CCDC90B-216ENST00000529856 ABHD15Q6UXT9 468 aa14.36□□□□□ -0.11
CCDC90B-216ENST00000529856 PLPPR4Q7Z2D5 763 aa14.36□□□□□ -0.11
CCDC90B-216ENST00000529856 TMEM199Q8N511 208 aa14.36□□□□□ -0.11
CCDC90B-216ENST00000529856 FBXO18Q8NFZ0 1043 aa14.36□□□□□ -0.11
CCDC90B-216ENST00000529856 GLG1Q92896 1179 aa14.36□□□□□ -0.11
CCDC90B-216ENST00000529856 SLC5A5Q92911 643 aa14.36□□□□□ -0.11
CCDC90B-216ENST00000529856 RIT2Q99578 217 aa14.36□□□□□ -0.11
CCDC90B-216ENST00000529856 ERAP1Q9NZ08 941 aa14.36□□□□□ -0.11
CCDC90B-216ENST00000529856 UMODL1Q5DID0 1318 aa14.36□□□□□ -0.11
CCDC90B-216ENST00000529856 EMSYQ7Z589 1322 aa14.36□□□□□ -0.11
CCDC90B-216ENST00000529856 TRIP12Q14669 1992 aaPredicted RBP14.35□□□□□ -0.11
CCDC90B-216ENST00000529856 FAM205CA6NFA0 338 aa14.35□□□□□ -0.11
CCDC90B-216ENST00000529856 GCFC2P16383 781 aaKnown RBP14.35□□□□□ -0.11
CCDC90B-216ENST00000529856 STAT5BP51692 787 aa14.35□□□□□ -0.11
CCDC90B-216ENST00000529856 ZNF200P98182 395 aaPredicted RBP14.35□□□□□ -0.11
CCDC90B-216ENST00000529856 KRT76Q01546 638 aa14.35□□□□□ -0.11
CCDC90B-216ENST00000529856 FPGSQ05932 587 aa14.35□□□□□ -0.11
CCDC90B-216ENST00000529856 SAFBQ15424 915 aaKnown RBP eCLIP14.35□□□□□ -0.11
CCDC90B-216ENST00000529856 NAP1L4Q99733 375 aaKnown RBP14.35□□□□□ -0.11
CCDC90B-216ENST00000529856 AZI2Q9H6S1 392 aa14.35□□□□□ -0.11
CCDC90B-216ENST00000529856 DDX25Q9UHL0 483 aaKnown RBP14.35□□□□□ -0.11
CCDC90B-216ENST00000529856 C17orf102A2RUQ5 167 aa14.34□□□□□ -0.11
CCDC90B-216ENST00000529856 PITPNM1O00562 1244 aa14.34□□□□□ -0.11
CCDC90B-216ENST00000529856 SLC37A4O43826 429 aa14.34□□□□□ -0.11
CCDC90B-216ENST00000529856 GAS7O60861 476 aa14.34□□□□□ -0.11
CCDC90B-216ENST00000529856 PSMD10O75832 226 aa14.34□□□□□ -0.11
CCDC90B-216ENST00000529856 GNAT1P11488 350 aa14.34□□□□□ -0.11
CCDC90B-216ENST00000529856 CSF2RAP15509 400 aa14.34□□□□□ -0.11
CCDC90B-216ENST00000529856 EPHB4P54760 987 aa14.34□□□□□ -0.11
CCDC90B-216ENST00000529856 CCL23P55773 120 aa14.34□□□□□ -0.11
CCDC90B-216ENST00000529856 ADAM17P78536 824 aa14.34□□□□□ -0.11
CCDC90B-216ENST00000529856 PTK7Q13308 1070 aa14.34□□□□□ -0.11
CCDC90B-216ENST00000529856 PPIGQ13427 754 aaKnown RBP eCLIP14.34□□□□□ -0.11
CCDC90B-216ENST00000529856 BFSP2Q13515 415 aa14.34□□□□□ -0.11
CCDC90B-216ENST00000529856 SMAP1Q8IYB5 467 aaPredicted RBP14.34□□□□□ -0.11
CCDC90B-216ENST00000529856 TDHQ8IZJ6 230 aa14.34□□□□□ -0.11
CCDC90B-216ENST00000529856 ETNPPLQ8TBG4 499 aa14.34□□□□□ -0.11
CCDC90B-216ENST00000529856 DHX38Q92620 1227 aaKnown RBP14.34□□□□□ -0.11
CCDC90B-216ENST00000529856 GJA10Q969M2 543 aa14.34□□□□□ -0.11
CCDC90B-216ENST00000529856 WNT8AQ9H1J5 351 aa14.34□□□□□ -0.11
CCDC90B-216ENST00000529856 SETD4Q9NVD3 440 aa14.34□□□□□ -0.11
CCDC90B-216ENST00000529856 KAT6AQ92794 2004 aa14.34□□□□□ -0.11
CCDC90B-216ENST00000529856 RANBP2P49792 3224 aaKnown RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms