RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 PI3P19957 117 aa6.73□□□□□ -1.33
CTR9-204ENST00000529355 GLDCP23378 1020 aa6.73□□□□□ -1.33
CTR9-204ENST00000529355 EPHA5P54756 1037 aa6.73□□□□□ -1.33
CTR9-204ENST00000529355 FOXO4P98177 505 aa6.73□□□□□ -1.33
CTR9-204ENST00000529355 CACNB2Q08289 660 aaPredicted RBP6.73□□□□□ -1.33
CTR9-204ENST00000529355 CHRNA2Q15822 529 aa6.73□□□□□ -1.33
CTR9-204ENST00000529355 PKN3Q6P5Z2 889 aa6.73□□□□□ -1.33
CTR9-204ENST00000529355 ETV3LQ6ZN32 361 aa6.73□□□□□ -1.33
CTR9-204ENST00000529355 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.73□□□□□ -1.33
CTR9-204ENST00000529355 PROSER1Q86XN7 944 aa6.73□□□□□ -1.33
CTR9-204ENST00000529355 THNSL2Q86YJ6 484 aa6.73□□□□□ -1.33
CTR9-204ENST00000529355 NOSTRINQ8IVI9 506 aa6.73□□□□□ -1.33
CTR9-204ENST00000529355 FAM126BQ8IXS8 530 aa6.73□□□□□ -1.33
CTR9-204ENST00000529355 WNK4Q96J92 1243 aa6.73□□□□□ -1.33
CTR9-204ENST00000529355 CD320Q9NPF0 282 aa6.73□□□□□ -1.33
CTR9-204ENST00000529355 H2AFY2Q9P0M6 372 aaPredicted RBP6.73□□□□□ -1.33
CTR9-204ENST00000529355 PLAAQ9Y263 795 aa6.73□□□□□ -1.33
CTR9-204ENST00000529355 NPIPB6E9PJ23 425 aa6.72□□□□□ -1.33
CTR9-204ENST00000529355 CBX4O00257 560 aa6.72□□□□□ -1.33
CTR9-204ENST00000529355 PDE8AO60658 829 aa6.72□□□□□ -1.33
CTR9-204ENST00000529355 PTPN1P18031 435 aaKnown RBP6.72□□□□□ -1.33
CTR9-204ENST00000529355 PAN2Q504Q3 1202 aaKnown RBP6.72□□□□□ -1.33
CTR9-204ENST00000529355 BTBD8Q5XKL5 378 aa6.72□□□□□ -1.33
CTR9-204ENST00000529355 OLFML2BQ68BL8 750 aa6.72□□□□□ -1.33
CTR9-204ENST00000529355 TEPPQ6URK8 271 aa6.72□□□□□ -1.33
CTR9-204ENST00000529355 LIPIQ6XZB0 460 aa6.72□□□□□ -1.33
CTR9-204ENST00000529355 STRA8Q7Z7C7 330 aa6.72□□□□□ -1.33
CTR9-204ENST00000529355 DDX53Q86TM3 631 aaKnown RBP6.72□□□□□ -1.33
CTR9-204ENST00000529355 CILP2Q8IUL8 1156 aa6.72□□□□□ -1.33
CTR9-204ENST00000529355 FAM177A1Q8N128 213 aaPredicted RBP6.72□□□□□ -1.33
CTR9-204ENST00000529355 C2orf69Q8N8R5 385 aa6.72□□□□□ -1.33
CTR9-204ENST00000529355 GORASP1Q9BQQ3 440 aa6.72□□□□□ -1.33
CTR9-204ENST00000529355 INTS7Q9NVH2 962 aaKnown RBP6.72□□□□□ -1.33
CTR9-204ENST00000529355 RIC8BQ9NVN3 520 aa6.72□□□□□ -1.33
CTR9-204ENST00000529355 DTLQ9NZJ0 730 aa6.72□□□□□ -1.33
CTR9-204ENST00000529355 PTPDC1A2A3K4 754 aa6.71□□□□□ -1.34
CTR9-204ENST00000529355 SMAD4Q13485 552 aaKnown RBP6.71□□□□□ -1.34
CTR9-204ENST00000529355 RTP5Q14D33 572 aa6.71□□□□□ -1.34
CTR9-204ENST00000529355 VMACQ2NL98 169 aa6.71□□□□□ -1.34
CTR9-204ENST00000529355 CREB3L3Q68CJ9 461 aa6.71□□□□□ -1.34
CTR9-204ENST00000529355 CYP4F22Q6NT55 531 aa6.71□□□□□ -1.34
CTR9-204ENST00000529355 HHIPL2Q6UWX4 724 aa6.71□□□□□ -1.34
CTR9-204ENST00000529355 TMC5Q6UXY8 1006 aa6.71□□□□□ -1.34
CTR9-204ENST00000529355 RNF180Q86T96 592 aa6.71□□□□□ -1.34
CTR9-204ENST00000529355 FAM129CQ86XR2 697 aa6.71□□□□□ -1.34
CTR9-204ENST00000529355 ADGRG2Q8IZP9 1017 aa6.71□□□□□ -1.34
CTR9-204ENST00000529355 PHOSPHO1Q8TCT1 267 aa6.71□□□□□ -1.34
CTR9-204ENST00000529355 LEO1Q8WVC0 666 aaPredicted RBP6.71□□□□□ -1.34
CTR9-204ENST00000529355 CPA5Q8WXQ8 436 aa6.71□□□□□ -1.34
CTR9-204ENST00000529355 TOE1Q96GM8 510 aaKnown RBP6.71□□□□□ -1.34
CTR9-204ENST00000529355 ATP23Q9Y6H3 246 aa6.71□□□□□ -1.34
CTR9-204ENST00000529355 RASSF10A6NK89 507 aa6.7□□□□□ -1.34
CTR9-204ENST00000529355 NFIBO00712 420 aa6.7□□□□□ -1.34
CTR9-204ENST00000529355 GSTA4O15217 222 aa6.7□□□□□ -1.34
CTR9-204ENST00000529355 C4BPAP04003 597 aaKnown RBP6.7□□□□□ -1.34
CTR9-204ENST00000529355 FAHP16930 419 aa6.7□□□□□ -1.34
CTR9-204ENST00000529355 POU3F2P20265 443 aaPredicted RBP6.7□□□□□ -1.34
CTR9-204ENST00000529355 TARBP2Q15633 366 aaKnown RBP6.7□□□□□ -1.34
CTR9-204ENST00000529355 UBE2R2Q712K3 238 aaPredicted RBP6.7□□□□□ -1.34
CTR9-204ENST00000529355 B3GNT8Q7Z7M8 397 aa6.7□□□□□ -1.34
CTR9-204ENST00000529355 CHST14Q8NCH0 376 aa6.7□□□□□ -1.34
CTR9-204ENST00000529355 SIGLEC10Q96LC7 697 aa6.7□□□□□ -1.34
CTR9-204ENST00000529355 ZSWIM3Q96MP5 696 aa6.7□□□□□ -1.34
CTR9-204ENST00000529355 YIPF4Q9BSR8 244 aa6.7□□□□□ -1.34
CTR9-204ENST00000529355 KCTD3Q9Y597 815 aa6.7□□□□□ -1.34
CTR9-204ENST00000529355 IRAK3Q9Y616 596 aa6.7□□□□□ -1.34
CTR9-204ENST00000529355 A0A1B0GTL3 188 aa6.69□□□□□ -1.34
CTR9-204ENST00000529355 SLC12A8A0AV02 714 aa6.69□□□□□ -1.34
CTR9-204ENST00000529355 TCAF2A6NFQ2 919 aa6.69□□□□□ -1.34
CTR9-204ENST00000529355 B4E1Z4 1266 aa6.69□□□□□ -1.34
CTR9-204ENST00000529355 MAFKO60675 156 aa6.69□□□□□ -1.34
CTR9-204ENST00000529355 TSPAN15O95858 294 aa6.69□□□□□ -1.34
CTR9-204ENST00000529355 ATP2A2P16615 1042 aaKnown RBP6.69□□□□□ -1.34
CTR9-204ENST00000529355 PFKLP17858 780 aa6.69□□□□□ -1.34
CTR9-204ENST00000529355 KCNA10Q16322 511 aa6.69□□□□□ -1.34
CTR9-204ENST00000529355 FIGNQ5HY92 759 aa6.69□□□□□ -1.34
CTR9-204ENST00000529355 OTOP1Q7RTM1 612 aa6.69□□□□□ -1.34
CTR9-204ENST00000529355 SLC38A3Q99624 504 aa6.69□□□□□ -1.34
CTR9-204ENST00000529355 RNF38Q9H0F5 515 aa6.69□□□□□ -1.34
CTR9-204ENST00000529355 SLC39A2Q9NP94 309 aa6.69□□□□□ -1.34
CTR9-204ENST00000529355 B4GALT6Q9UBX8 382 aa6.69□□□□□ -1.34
CTR9-204ENST00000529355 CNOT6Q9ULM6 557 aaKnown RBP6.69□□□□□ -1.34
CTR9-204ENST00000529355 CLASP2O75122 1294 aaKnown RBP6.68□□□□□ -1.34
CTR9-204ENST00000529355 POU3F3P20264 500 aaPredicted RBP6.68□□□□□ -1.34
CTR9-204ENST00000529355 RAP1GAPP47736 663 aa6.68□□□□□ -1.34
CTR9-204ENST00000529355 ID4P47928 161 aa6.68□□□□□ -1.34
CTR9-204ENST00000529355 ITGA1P56199 1179 aa6.68□□□□□ -1.34
CTR9-204ENST00000529355 LINC00310P59036 64 aa6.68□□□□□ -1.34
CTR9-204ENST00000529355 IRF9Q00978 393 aa6.68□□□□□ -1.34
CTR9-204ENST00000529355 ADAM9Q13443 819 aa6.68□□□□□ -1.34
CTR9-204ENST00000529355 TMEM132BQ14DG7 1078 aa6.68□□□□□ -1.34
CTR9-204ENST00000529355 TRIM48Q8IWZ4 208 aa6.68□□□□□ -1.34
CTR9-204ENST00000529355 FNIP1Q8TF40 1166 aa6.68□□□□□ -1.34
CTR9-204ENST00000529355 CHTF18Q8WVB6 975 aa6.68□□□□□ -1.34
CTR9-204ENST00000529355 DLG3Q92796 817 aa6.68□□□□□ -1.34
CTR9-204ENST00000529355 PWWP2AQ96N64 755 aa6.68□□□□□ -1.34
CTR9-204ENST00000529355 PDGFDQ9GZP0 370 aaPredicted RBP6.68□□□□□ -1.34
CTR9-204ENST00000529355 SLKQ9H2G2 1235 aaPredicted RBP6.68□□□□□ -1.34
CTR9-204ENST00000529355 SPATA6Q9NWH7 488 aaPredicted RBP6.68□□□□□ -1.34
CTR9-204ENST00000529355 FAN1Q9Y2M0 1017 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms