RNA–Protein interactions for RNA: ENST00000529183.5

CASP4-206, Transcript of caspase 4, humanhuman

TSL 5

Gene CASP4, Length 612 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-206ENST00000529183 ANKRD44Q8N8A2 993 aa6.06□□□□□ -1.44
CASP4-206ENST00000529183 NECAB3Q96P71 396 aaPredicted RBP6.06□□□□□ -1.44
CASP4-206ENST00000529183 LBHD1Q9BQE6 289 aaPredicted RBP6.06□□□□□ -1.44
CASP4-206ENST00000529183 TTYH1Q9H313 450 aaPredicted RBP6.06□□□□□ -1.44
CASP4-206ENST00000529183 ACSS3Q9H6R3 686 aa6.06□□□□□ -1.44
CASP4-206ENST00000529183 RC3H2Q9HBD1 1191 aaKnown RBP6.06□□□□□ -1.44
CASP4-206ENST00000529183 CWC22Q9HCG8 908 aaKnown RBP6.06□□□□□ -1.44
CASP4-206ENST00000529183 TXNRD2Q9NNW7 524 aa6.06□□□□□ -1.44
CASP4-206ENST00000529183 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.06□□□□□ -1.44
CASP4-206ENST00000529183 ABCF2Q9UG63 623 aa6.06□□□□□ -1.44
CASP4-206ENST00000529183 USTQ9Y2C2 406 aa6.06□□□□□ -1.44
CASP4-206ENST00000529183 AFG3L2Q9Y4W6 797 aa6.06□□□□□ -1.44
CASP4-206ENST00000529183 MYO5AQ9Y4I1 1855 aaKnown RBP6.06□□□□□ -1.44
CASP4-206ENST00000529183 ATRNL1Q5VV63 1379 aa6.06□□□□□ -1.44
CASP4-206ENST00000529183 MAST3O60307 1309 aa6.05□□□□□ -1.44
CASP4-206ENST00000529183 MROH5Q6ZUA9 1318 aa6.05□□□□□ -1.44
CASP4-206ENST00000529183 GBF1Q92538 1859 aa6.05□□□□□ -1.44
CASP4-206ENST00000529183 LDHBP07195 334 aaKnown RBP6.05□□□□□ -1.44
CASP4-206ENST00000529183 ZKSCAN1P17029 563 aaPredicted RBP6.05□□□□□ -1.44
CASP4-206ENST00000529183 MAOBP27338 520 aa6.05□□□□□ -1.44
CASP4-206ENST00000529183 BTDP43251 543 aa6.05□□□□□ -1.44
CASP4-206ENST00000529183 RTP1P59025 263 aa6.05□□□□□ -1.44
CASP4-206ENST00000529183 CACNB2Q08289 660 aaPredicted RBP6.05□□□□□ -1.44
CASP4-206ENST00000529183 MESP2Q0VG99 397 aa6.05□□□□□ -1.44
CASP4-206ENST00000529183 CCDC85BQ15834 202 aaPredicted RBP6.05□□□□□ -1.44
CASP4-206ENST00000529183 GJC2Q5T442 439 aaPredicted RBP6.05□□□□□ -1.44
CASP4-206ENST00000529183 PI16Q6UXB8 463 aa6.05□□□□□ -1.44
CASP4-206ENST00000529183 VGLL2Q8N8G2 317 aa6.05□□□□□ -1.44
CASP4-206ENST00000529183 LRRN4CLQ8ND94 238 aa6.05□□□□□ -1.44
CASP4-206ENST00000529183 TBC1D22AQ8WUA7 517 aa6.05□□□□□ -1.44
CASP4-206ENST00000529183 FERMT2Q96AC1 680 aa6.05□□□□□ -1.44
CASP4-206ENST00000529183 HOOK2Q96ED9 719 aa6.05□□□□□ -1.44
CASP4-206ENST00000529183 TRAIPQ9BWF2 469 aa6.05□□□□□ -1.44
CASP4-206ENST00000529183 ASCC2Q9H1I8 757 aaPredicted RBP6.05□□□□□ -1.44
CASP4-206ENST00000529183 PORCNQ9H237 461 aa6.05□□□□□ -1.44
CASP4-206ENST00000529183 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.05□□□□□ -1.44
CASP4-206ENST00000529183 ZNF112Q9UJU3 913 aa6.05□□□□□ -1.44
CASP4-206ENST00000529183 AGTPBP1Q9UPW5 1226 aa6.05□□□□□ -1.44
CASP4-206ENST00000529183 TCF20Q9UGU0 1960 aaKnown RBP6.05□□□□□ -1.44
CASP4-206ENST00000529183 PLXNA1Q9UIW2 1896 aa6.05□□□□□ -1.44
CASP4-206ENST00000529183 CACNA1FO60840 1977 aa6.04□□□□□ -1.44
CASP4-206ENST00000529183 COL2A1P02458 1487 aaPredicted RBP6.04□□□□□ -1.44
CASP4-206ENST00000529183 RLFQ13129 1914 aa6.04□□□□□ -1.44
CASP4-206ENST00000529183 CXCL11O14625 94 aa6.04□□□□□ -1.44
CASP4-206ENST00000529183 VAMP4O75379 141 aa6.04□□□□□ -1.44
CASP4-206ENST00000529183 PDE8BO95263 885 aa6.04□□□□□ -1.44
CASP4-206ENST00000529183 IFIT1P09914 478 aaKnown RBP6.04□□□□□ -1.44
CASP4-206ENST00000529183 SLC5A1P13866 664 aa6.04□□□□□ -1.44
CASP4-206ENST00000529183 IRX3P78415 501 aaPredicted RBP6.04□□□□□ -1.44
CASP4-206ENST00000529183 CDK5R2Q13319 367 aa6.04□□□□□ -1.44
CASP4-206ENST00000529183 ZNF423Q2M1K9 1284 aa6.04□□□□□ -1.44
CASP4-206ENST00000529183 TRIM60Q495X7 471 aa6.04□□□□□ -1.44
CASP4-206ENST00000529183 HHIPL2Q6UWX4 724 aa6.04□□□□□ -1.44
CASP4-206ENST00000529183 FASTKD5Q7L8L6 764 aaKnown RBP6.04□□□□□ -1.44
CASP4-206ENST00000529183 DZIP1Q86YF9 867 aaKnown RBP6.04□□□□□ -1.44
CASP4-206ENST00000529183 BADQ92934 168 aa6.04□□□□□ -1.44
CASP4-206ENST00000529183 SRCIN1Q9C0H9 1055 aa6.04□□□□□ -1.44
CASP4-206ENST00000529183 SOX17Q9H6I2 414 aaPredicted RBP6.04□□□□□ -1.44
CASP4-206ENST00000529183 FLRT1Q9NZU1 646 aa6.04□□□□□ -1.44
CASP4-206ENST00000529183 AP4E1Q9UPM8 1137 aa6.04□□□□□ -1.44
CASP4-206ENST00000529183 PA2G4Q9UQ80 394 aaKnown RBP6.04□□□□□ -1.44
CASP4-206ENST00000529183 CEP290O15078 2479 aa6.04□□□□□ -1.44
CASP4-206ENST00000529183 ANP32CO43423 234 aa6.03□□□□□ -1.44
CASP4-206ENST00000529183 POLR3DP05423 398 aaPredicted RBP6.03□□□□□ -1.44
CASP4-206ENST00000529183 CYP2C19P33261 490 aa6.03□□□□□ -1.44
CASP4-206ENST00000529183 HDLBPQ00341 1268 aaKnown RBP6.03□□□□□ -1.44
CASP4-206ENST00000529183 MTMR3Q13615 1198 aa6.03□□□□□ -1.44
CASP4-206ENST00000529183 PUM3Q15397 648 aaKnown RBP6.03□□□□□ -1.44
CASP4-206ENST00000529183 FAM110CQ1W6H9 321 aa6.03□□□□□ -1.44
CASP4-206ENST00000529183 FAM109BQ6ICB4 259 aaPredicted RBP6.03□□□□□ -1.44
CASP4-206ENST00000529183 CCAR1Q8IX12 1150 aaKnown RBP6.03□□□□□ -1.44
CASP4-206ENST00000529183 P2RX7Q99572 595 aaKnown RBP6.03□□□□□ -1.44
CASP4-206ENST00000529183 BHLHE41Q9C0J9 482 aaPredicted RBP6.03□□□□□ -1.44
CASP4-206ENST00000529183 PRDM7Q9NQW5 492 aa6.03□□□□□ -1.44
CASP4-206ENST00000529183 SAP30BPQ9UHR5 308 aaKnown RBP6.03□□□□□ -1.44
CASP4-206ENST00000529183 GJD2Q9UKL4 321 aa6.03□□□□□ -1.44
CASP4-206ENST00000529183 OGDHLQ9ULD0 1010 aa6.03□□□□□ -1.44
CASP4-206ENST00000529183 RFX7Q2KHR2 1363 aa6.03□□□□□ -1.44
CASP4-206ENST00000529183 GRXCR1A8MXD5 290 aa6.02□□□□□ -1.45
CASP4-206ENST00000529183 FGFR2P21802 821 aa6.02□□□□□ -1.45
CASP4-206ENST00000529183 FUT4P22083 530 aa6.02□□□□□ -1.45
CASP4-206ENST00000529183 MPSTP25325 297 aa6.02□□□□□ -1.45
CASP4-206ENST00000529183 ASPAP45381 313 aa6.02□□□□□ -1.45
CASP4-206ENST00000529183 EPHB4P54760 987 aa6.02□□□□□ -1.45
CASP4-206ENST00000529183 MAP7Q14244 749 aa6.02□□□□□ -1.45
CASP4-206ENST00000529183 PDE3AQ14432 1141 aa6.02□□□□□ -1.45
CASP4-206ENST00000529183 ATP2B3Q16720 1220 aa6.02□□□□□ -1.45
CASP4-206ENST00000529183 SPRED3Q2MJR0 410 aa6.02□□□□□ -1.45
CASP4-206ENST00000529183 PRAMEF19Q5SWL8 479 aa6.02□□□□□ -1.45
CASP4-206ENST00000529183 GPR142Q7Z601 462 aa6.02□□□□□ -1.45
CASP4-206ENST00000529183 KSR1Q8IVT5 923 aa6.02□□□□□ -1.45
CASP4-206ENST00000529183 TRPV1Q8NER1 839 aa6.02□□□□□ -1.45
CASP4-206ENST00000529183 NPLOC4Q8TAT6 608 aa6.02□□□□□ -1.45
CASP4-206ENST00000529183 TRIM56Q9BRZ2 755 aaKnown RBP6.02□□□□□ -1.45
CASP4-206ENST00000529183 YIPF2Q9BWQ6 316 aa6.02□□□□□ -1.45
CASP4-206ENST00000529183 PRKRIP1Q9H875 184 aaPredicted RBP6.02□□□□□ -1.45
CASP4-206ENST00000529183 POLIQ9UNA4 740 aa6.02□□□□□ -1.45
CASP4-206ENST00000529183 MROH7-TTC4A0A0A0MT08 1334 aa6.01□□□□□ -1.45
CASP4-206ENST00000529183 CTNND1O60716 968 aaKnown RBP6.01□□□□□ -1.45
CASP4-206ENST00000529183 TNFRSF21O75509 655 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms