RNA–Protein interactions for RNA: ENST00000529183.5

CASP4-206, Transcript of caspase 4, humanhuman

TSL 5

Gene CASP4, Length 612 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-206ENST00000529183 AEBP2Q6ZN18 517 aaPredicted RBP24.17■■□□□ 1.46
CASP4-206ENST00000529183 CHIC1Q5VXU3 224 aa22.51■■□□□ 1.19
CASP4-206ENST00000529183 SENP3Q9H4L4 574 aaPredicted RBP20.4■□□□□ 0.86
CASP4-206ENST00000529183 PHF23Q9BUL5 403 aaPredicted RBP20.22■□□□□ 0.83
CASP4-206ENST00000529183 FOXD1Q16676 465 aa19.22■□□□□ 0.67
CASP4-206ENST00000529183 POTEDQ86YR6 584 aa18.13■□□□□ 0.49
CASP4-206ENST00000529183 MSH5O43196 834 aa17.89■□□□□ 0.45
CASP4-206ENST00000529183 PPP6R1Q9UPN7 881 aa17.85■□□□□ 0.45
CASP4-206ENST00000529183 PIAS4Q8N2W9 510 aaPredicted RBP17.84■□□□□ 0.45
CASP4-206ENST00000529183 PLPPR3Q6T4P5 718 aa17.77■□□□□ 0.44
CASP4-206ENST00000529183 ADRA2BP18089 450 aa17.75■□□□□ 0.43
CASP4-206ENST00000529183 MAPK8IP2Q13387 824 aaPredicted RBP16.44■□□□□ 0.22
CASP4-206ENST00000529183 DMRT2Q9Y5R5 561 aa16.19■□□□□ 0.18
CASP4-206ENST00000529183 SCAF1Q9H7N4 1312 aaKnown RBP15.93■□□□□ 0.14
CASP4-206ENST00000529183 PPP4R3CPQ6ZMV5 832 aa15.64■□□□□ 0.09
CASP4-206ENST00000529183 CACNB1Q02641 598 aaPredicted RBP15.62■□□□□ 0.09
CASP4-206ENST00000529183 DCAF8L1A6NGE4 600 aa15.61■□□□□ 0.09
CASP4-206ENST00000529183 HOXD11P31277 338 aaPredicted RBP15.47■□□□□ 0.07
CASP4-206ENST00000529183 RNF39Q9H2S5 420 aa15.35■□□□□ 0.05
CASP4-206ENST00000529183 CNKSR2Q8WXI2 1034 aa15.31■□□□□ 0.04
CASP4-206ENST00000529183 RNF216Q9NWF9 866 aaPredicted RBP15.25■□□□□ 0.03
CASP4-206ENST00000529183 C1QBPQ07021 282 aaKnown RBP15□□□□□ -0.01
CASP4-206ENST00000529183 DNAJC5BQ9UF47 199 aa14.81□□□□□ -0.04
CASP4-206ENST00000529183 NPM3O75607 178 aaKnown RBP14.77□□□□□ -0.05
CASP4-206ENST00000529183 NCBP3Q53F19 620 aaKnown RBP14.77□□□□□ -0.05
CASP4-206ENST00000529183 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.74□□□□□ -0.05
CASP4-206ENST00000529183 U3KPZ7 1027 aaPredicted RBP14.5□□□□□ -0.09
CASP4-206ENST00000529183 SPINK5Q9NQ38 1064 aaPredicted RBP14.43□□□□□ -0.1
CASP4-206ENST00000529183 DSG3P32926 999 aa14.32□□□□□ -0.12
CASP4-206ENST00000529183 CAPN15O75808 1086 aa14.31□□□□□ -0.12
CASP4-206ENST00000529183 KCNA4P22459 653 aa14.31□□□□□ -0.12
CASP4-206ENST00000529183 SLC4A2P04920 1241 aa14.23□□□□□ -0.13
CASP4-206ENST00000529183 POTEHQ6S545 545 aa14.11□□□□□ -0.15
CASP4-206ENST00000529183 ABCB7O75027 752 aa14.06□□□□□ -0.16
CASP4-206ENST00000529183 TRHP20396 242 aaPredicted RBP14.05□□□□□ -0.16
CASP4-206ENST00000529183 ZNF219Q9P2Y4 722 aaPredicted RBP13.85□□□□□ -0.19
CASP4-206ENST00000529183 APLP2Q06481 763 aa13.73□□□□□ -0.21
CASP4-206ENST00000529183 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.72□□□□□ -0.21
CASP4-206ENST00000529183 HNRNPUL2Q1KMD3 747 aaKnown RBP13.72□□□□□ -0.21
CASP4-206ENST00000529183 SAMD1Q6SPF0 538 aaPredicted RBP13.7□□□□□ -0.22
CASP4-206ENST00000529183 POLA2Q14181 598 aa13.59□□□□□ -0.23
CASP4-206ENST00000529183 MYCNP04198 464 aaPredicted RBP13.55□□□□□ -0.24
CASP4-206ENST00000529183 ATF5Q9Y2D1 282 aaPredicted RBP13.51□□□□□ -0.25
CASP4-206ENST00000529183 RBM42Q9BTD8 480 aaKnown RBP13.47□□□□□ -0.25
CASP4-206ENST00000529183 CHRDL2Q6WN34 429 aa13.43□□□□□ -0.26
CASP4-206ENST00000529183 SLC4A1APQ9BWU0 796 aaKnown RBP13.34□□□□□ -0.27
CASP4-206ENST00000529183 FOXD4L1Q9NU39 408 aa13.3□□□□□ -0.28
CASP4-206ENST00000529183 ZBTB22O15209 634 aa13.23□□□□□ -0.29
CASP4-206ENST00000529183 OSCARQ8IYS5 282 aa13.23□□□□□ -0.29
CASP4-206ENST00000529183 AKT1S1Q96B36 256 aa13.16□□□□□ -0.3
CASP4-206ENST00000529183 REM2Q8IYK8 340 aaPredicted RBP13.15□□□□□ -0.3
CASP4-206ENST00000529183 PIP4P2Q8N4L2 257 aa13.11□□□□□ -0.31
CASP4-206ENST00000529183 SP7Q8TDD2 431 aaPredicted RBP13.07□□□□□ -0.32
CASP4-206ENST00000529183 ZBTB12Q9Y330 459 aaPredicted RBP13.06□□□□□ -0.32
CASP4-206ENST00000529183 PITPNM1O00562 1244 aa13.05□□□□□ -0.32
CASP4-206ENST00000529183 FXR2P51116 673 aaKnown RBP eCLIP12.94□□□□□ -0.34
CASP4-206ENST00000529183 EVX2Q03828 476 aa12.91□□□□□ -0.34
CASP4-206ENST00000529183 HAX1O00165 279 aa12.9□□□□□ -0.34
CASP4-206ENST00000529183 MKRN4PQ13434 485 aaPredicted RBP12.82□□□□□ -0.36
CASP4-206ENST00000529183 ATXN8OSP0DMR3 200 aa12.78□□□□□ -0.36
CASP4-206ENST00000529183 SPDYE2BA6NHP3 402 aa12.73□□□□□ -0.37
CASP4-206ENST00000529183 SPDYE6P0CI01 402 aa12.73□□□□□ -0.37
CASP4-206ENST00000529183 SPDYE2Q495Y8 402 aa12.73□□□□□ -0.37
CASP4-206ENST00000529183 FBLN2P98095 1184 aa12.7□□□□□ -0.38
CASP4-206ENST00000529183 CLEC11AQ9Y240 323 aa12.7□□□□□ -0.38
CASP4-206ENST00000529183 PRKAR2AP13861 404 aaKnown RBP12.68□□□□□ -0.38
CASP4-206ENST00000529183 SSUH2Q9Y2M2 353 aa12.62□□□□□ -0.39
CASP4-206ENST00000529183 ZNF692Q9BU19 519 aaPredicted RBP12.61□□□□□ -0.39
CASP4-206ENST00000529183 CHADLQ6NUI6 762 aa12.59□□□□□ -0.39
CASP4-206ENST00000529183 SPDYE1Q8NFV5 336 aaPredicted RBP12.58□□□□□ -0.4
CASP4-206ENST00000529183 C19orf67A6NJJ6 358 aa12.53□□□□□ -0.4
CASP4-206ENST00000529183 PABPN1Q86U42 306 aaKnown RBP eCLIP12.46□□□□□ -0.41
CASP4-206ENST00000529183 GABBR2O75899 941 aa12.45□□□□□ -0.42
CASP4-206ENST00000529183 NISCHQ9Y2I1 1504 aa12.41□□□□□ -0.42
CASP4-206ENST00000529183 PRR29P0C7W0 189 aa12.38□□□□□ -0.43
CASP4-206ENST00000529183 POTEIP0CG38 1075 aa12.29□□□□□ -0.44
CASP4-206ENST00000529183 CSRNP3Q8WYN3 585 aa12.29□□□□□ -0.44
CASP4-206ENST00000529183 LHX8Q68G74 356 aa12.26□□□□□ -0.45
CASP4-206ENST00000529183 CD44P16070 742 aaKnown RBP12.25□□□□□ -0.45
CASP4-206ENST00000529183 FARP1Q9Y4F1 1045 aaPredicted RBP12.24□□□□□ -0.45
CASP4-206ENST00000529183 CREBZFQ9NS37 354 aa12.1□□□□□ -0.47
CASP4-206ENST00000529183 ZRANB1Q9UGI0 708 aa12.04□□□□□ -0.48
CASP4-206ENST00000529183 EHMT2Q96KQ7 1210 aa12.02□□□□□ -0.49
CASP4-206ENST00000529183 GALR2O43603 387 aaPredicted RBP12.01□□□□□ -0.49
CASP4-206ENST00000529183 ZNF579Q8NAF0 562 aaKnown RBP12□□□□□ -0.49
CASP4-206ENST00000529183 DCBLD2Q96PD2 775 aa11.97□□□□□ -0.49
CASP4-206ENST00000529183 SPDYE4A6NLX3 237 aa11.95□□□□□ -0.5
CASP4-206ENST00000529183 PHF12Q96QT6 1004 aa11.94□□□□□ -0.5
CASP4-206ENST00000529183 POTEB2H3BUK9 544 aa11.91□□□□□ -0.5
CASP4-206ENST00000529183 MNX1P50219 401 aaPredicted RBP11.87□□□□□ -0.51
CASP4-206ENST00000529183 STAG3Q9UJ98 1225 aa11.85□□□□□ -0.51
CASP4-206ENST00000529183 CLCN6P51797 869 aa11.84□□□□□ -0.51
CASP4-206ENST00000529183 PELP1Q8IZL8 1130 aaKnown RBP11.84□□□□□ -0.51
CASP4-206ENST00000529183 OTUD5Q96G74 571 aa11.83□□□□□ -0.52
CASP4-206ENST00000529183 PLSCR2Q9NRY7 297 aa11.76□□□□□ -0.53
CASP4-206ENST00000529183 MS4A3Q96HJ5 214 aa11.74□□□□□ -0.53
CASP4-206ENST00000529183 PAK3O75914 559 aaPredicted RBP11.72□□□□□ -0.53
CASP4-206ENST00000529183 POTEJP0CG39 1038 aa11.7□□□□□ -0.54
CASP4-206ENST00000529183 NPM1P06748 294 aaKnown RBP eCLIP11.67□□□□□ -0.54
CASP4-206ENST00000529183 ABCC9O60706 1549 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms