RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 GPR153Q6NV75 609 aa10.35□□□□□ -0.75
CMTM1-210ENST00000528441 LRRC8DQ7L1W4 858 aa10.35□□□□□ -0.75
CMTM1-210ENST00000528441 TRIM50Q86XT4 487 aa10.35□□□□□ -0.75
CMTM1-210ENST00000528441 AFAP1L1Q8TED9 768 aa10.35□□□□□ -0.75
CMTM1-210ENST00000528441 KAT2BQ92831 832 aa10.35□□□□□ -0.75
CMTM1-210ENST00000528441 KCNB2Q92953 911 aa10.35□□□□□ -0.75
CMTM1-210ENST00000528441 TIFAQ96CG3 184 aa10.35□□□□□ -0.75
CMTM1-210ENST00000528441 UIMC1Q96RL1 719 aa10.35□□□□□ -0.75
CMTM1-210ENST00000528441 RNF26Q9BY78 433 aaPredicted RBP10.35□□□□□ -0.75
CMTM1-210ENST00000528441 ZSWIM6Q9HCJ5 1215 aa10.35□□□□□ -0.75
CMTM1-210ENST00000528441 JPH1Q9HDC5 661 aaPredicted RBP10.35□□□□□ -0.75
CMTM1-210ENST00000528441 JADE2Q9NQC1 790 aa10.35□□□□□ -0.75
CMTM1-210ENST00000528441 VPS54Q9P1Q0 977 aa10.35□□□□□ -0.75
CMTM1-210ENST00000528441 TRIP12Q14669 1992 aaPredicted RBP10.35□□□□□ -0.75
CMTM1-210ENST00000528441 TANC1Q9C0D5 1861 aa10.34□□□□□ -0.75
CMTM1-210ENST00000528441 GRXCR1A8MXD5 290 aa10.34□□□□□ -0.75
CMTM1-210ENST00000528441 KIF28PB7ZC32 967 aa10.34□□□□□ -0.75
CMTM1-210ENST00000528441 PRPF3O43395 683 aaKnown RBP10.34□□□□□ -0.75
CMTM1-210ENST00000528441 IQCF3P0C7M6 154 aa10.34□□□□□ -0.75
CMTM1-210ENST00000528441 SMIM10L2AP0DMW4 78 aa10.34□□□□□ -0.75
CMTM1-210ENST00000528441 SMIM10L2BP0DMW5 78 aa10.34□□□□□ -0.75
CMTM1-210ENST00000528441 FOSL2P15408 326 aa10.34□□□□□ -0.75
CMTM1-210ENST00000528441 SELPP16109 830 aa10.34□□□□□ -0.75
CMTM1-210ENST00000528441 PDIA3P30101 505 aaKnown RBP10.34□□□□□ -0.75
CMTM1-210ENST00000528441 ZNF200P98182 395 aaPredicted RBP10.34□□□□□ -0.75
CMTM1-210ENST00000528441 PTK7Q13308 1070 aa10.34□□□□□ -0.75
CMTM1-210ENST00000528441 ANKRD1Q15327 319 aa10.34□□□□□ -0.75
CMTM1-210ENST00000528441 MCTP2Q6DN12 878 aa10.34□□□□□ -0.75
CMTM1-210ENST00000528441 TYW1BQ6NUM6 668 aa10.34□□□□□ -0.75
CMTM1-210ENST00000528441 MAMSTRQ6ZN01 415 aa10.34□□□□□ -0.75
CMTM1-210ENST00000528441 PLA2G4DQ86XP0 818 aa10.34□□□□□ -0.75
CMTM1-210ENST00000528441 CKAP2LQ8IYA6 745 aa10.34□□□□□ -0.75
CMTM1-210ENST00000528441 SEPT1Q8WYJ6 367 aa10.34□□□□□ -0.75
CMTM1-210ENST00000528441 TNPO1Q92973 898 aaKnown RBP10.34□□□□□ -0.75
CMTM1-210ENST00000528441 GAS2L1Q99501 681 aaPredicted RBP10.34□□□□□ -0.75
CMTM1-210ENST00000528441 GPR20Q99678 358 aa10.34□□□□□ -0.75
CMTM1-210ENST00000528441 SENP7Q9BQF6 1050 aa10.34□□□□□ -0.75
CMTM1-210ENST00000528441 MXRA8Q9BRK3 442 aa10.34□□□□□ -0.75
CMTM1-210ENST00000528441 ZBED2Q9BTP6 218 aa10.34□□□□□ -0.75
CMTM1-210ENST00000528441 SLC9A2Q9UBY0 812 aa10.34□□□□□ -0.75
CMTM1-210ENST00000528441 SAMM50Q9Y512 469 aa10.34□□□□□ -0.75
CMTM1-210ENST00000528441 SCN5AQ14524 2016 aa10.34□□□□□ -0.75
CMTM1-210ENST00000528441 MAFGO15525 162 aa10.33□□□□□ -0.76
CMTM1-210ENST00000528441 MARCH6O60337 910 aa10.33□□□□□ -0.76
CMTM1-210ENST00000528441 DEXIO95424 95 aa10.33□□□□□ -0.76
CMTM1-210ENST00000528441 ATP2A2P16615 1042 aaKnown RBP10.33□□□□□ -0.76
CMTM1-210ENST00000528441 IFNAR1P17181 557 aa10.33□□□□□ -0.76
CMTM1-210ENST00000528441 ITGB5P18084 799 aa10.33□□□□□ -0.76
CMTM1-210ENST00000528441 FOSBP53539 338 aa10.33□□□□□ -0.76
CMTM1-210ENST00000528441 PPFIA1Q13136 1202 aa10.33□□□□□ -0.76
CMTM1-210ENST00000528441 SEMA3FQ13275 785 aa10.33□□□□□ -0.76
CMTM1-210ENST00000528441 TOB2Q14106 344 aaPredicted RBP10.33□□□□□ -0.76
CMTM1-210ENST00000528441 CEP55Q53EZ4 464 aa10.33□□□□□ -0.76
CMTM1-210ENST00000528441 PPP2R2DQ66LE6 453 aa10.33□□□□□ -0.76
CMTM1-210ENST00000528441 TRMT1LQ7Z2T5 733 aaKnown RBP10.33□□□□□ -0.76
CMTM1-210ENST00000528441 RSPH3Q86UC2 560 aa10.33□□□□□ -0.76
CMTM1-210ENST00000528441 SESTD1Q86VW0 696 aa10.33□□□□□ -0.76
CMTM1-210ENST00000528441 PDCD7Q8N8D1 485 aaKnown RBP10.33□□□□□ -0.76
CMTM1-210ENST00000528441 RASGRP4Q8TDF6 673 aa10.33□□□□□ -0.76
CMTM1-210ENST00000528441 HERVK_113Q902F9 699 aa10.33□□□□□ -0.76
CMTM1-210ENST00000528441 ZNF577Q9BSK1 485 aa10.33□□□□□ -0.76
CMTM1-210ENST00000528441 TM6SF1Q9BZW5 370 aa10.33□□□□□ -0.76
CMTM1-210ENST00000528441 NKX2-4Q9H2Z4 354 aa10.33□□□□□ -0.76
CMTM1-210ENST00000528441 SMARCAD1Q9H4L7 1026 aa10.33□□□□□ -0.76
CMTM1-210ENST00000528441 BCAS3Q9H6U6 928 aa10.33□□□□□ -0.76
CMTM1-210ENST00000528441 SLC28A3Q9HAS3 691 aa10.33□□□□□ -0.76
CMTM1-210ENST00000528441 FAM217BQ9NTX9 383 aaPredicted RBP10.33□□□□□ -0.76
CMTM1-210ENST00000528441 SETD4Q9NVD3 440 aa10.33□□□□□ -0.76
CMTM1-210ENST00000528441 ERAP1Q9NZ08 941 aa10.33□□□□□ -0.76
CMTM1-210ENST00000528441 UBIAD1Q9Y5Z9 338 aa10.33□□□□□ -0.76
CMTM1-210ENST00000528441 DNAH12Q6ZR08 3092 aa10.33□□□□□ -0.76
CMTM1-210ENST00000528441 M0QZ92 97 aa10.32□□□□□ -0.76
CMTM1-210ENST00000528441 TREHO43280 583 aa10.32□□□□□ -0.76
CMTM1-210ENST00000528441 ATP9AO75110 1047 aa10.32□□□□□ -0.76
CMTM1-210ENST00000528441 PARNO95453 639 aaKnown RBP10.32□□□□□ -0.76
CMTM1-210ENST00000528441 CKBP12277 381 aa10.32□□□□□ -0.76
CMTM1-210ENST00000528441 KCNA2P16389 499 aa10.32□□□□□ -0.76
CMTM1-210ENST00000528441 IBSPP21815 317 aaPredicted RBP10.32□□□□□ -0.76
CMTM1-210ENST00000528441 SREBF1P36956 1147 aa10.32□□□□□ -0.76
CMTM1-210ENST00000528441 RABGGTBP53611 331 aa10.32□□□□□ -0.76
CMTM1-210ENST00000528441 SETQ01105 290 aaPredicted RBP10.32□□□□□ -0.76
CMTM1-210ENST00000528441 PRR16Q569H4 304 aa10.32□□□□□ -0.76
CMTM1-210ENST00000528441 FAM160B1Q5W0V3 765 aa10.32□□□□□ -0.76
CMTM1-210ENST00000528441 FAM117BQ6P1L5 589 aa10.32□□□□□ -0.76
CMTM1-210ENST00000528441 MICALL1Q8N3F8 863 aa10.32□□□□□ -0.76
CMTM1-210ENST00000528441 EFCAB3Q8N7B9 438 aa10.32□□□□□ -0.76
CMTM1-210ENST00000528441 SLC17A8Q8NDX2 589 aa10.32□□□□□ -0.76
CMTM1-210ENST00000528441 PPM1EQ8WY54 764 aa10.32□□□□□ -0.76
CMTM1-210ENST00000528441 MYLIPQ8WY64 445 aa10.32□□□□□ -0.76
CMTM1-210ENST00000528441 ZNF274Q96GC6 653 aaPredicted RBP10.32□□□□□ -0.76
CMTM1-210ENST00000528441 C16orf70Q9BSU1 422 aa10.32□□□□□ -0.76
CMTM1-210ENST00000528441 PBX4Q9BYU1 374 aa10.32□□□□□ -0.76
CMTM1-210ENST00000528441 BRMS1Q9HCU9 246 aa10.32□□□□□ -0.76
CMTM1-210ENST00000528441 PLSCR2Q9NRY7 297 aa10.32□□□□□ -0.76
CMTM1-210ENST00000528441 KCNH7Q9NS40 1196 aa10.32□□□□□ -0.76
CMTM1-210ENST00000528441 MTMR10Q9NXD2 777 aa10.32□□□□□ -0.76
CMTM1-210ENST00000528441 CXXC1Q9P0U4 656 aaPredicted RBP10.32□□□□□ -0.76
CMTM1-210ENST00000528441 ESYT2A0FGR8 921 aa10.31□□□□□ -0.76
CMTM1-210ENST00000528441 RSPH10B2B2RC85 870 aa10.31□□□□□ -0.76
CMTM1-210ENST00000528441 HAS3O00219 553 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms