RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 ECM2O94769 699 aaPredicted RBP16.05■□□□□ 0.16
CAPN1-214ENST00000528165 TRIM37O94972 964 aa16.05■□□□□ 0.16
CAPN1-214ENST00000528165 PPP2R5AQ15172 486 aa16.05■□□□□ 0.16
CAPN1-214ENST00000528165 ASIC2Q16515 512 aa16.05■□□□□ 0.16
CAPN1-214ENST00000528165 IFI16Q16666 785 aaKnown RBP16.05■□□□□ 0.16
CAPN1-214ENST00000528165 TMC3Q7Z5M5 1100 aa16.05■□□□□ 0.16
CAPN1-214ENST00000528165 NEK8Q86SG6 692 aa16.05■□□□□ 0.16
CAPN1-214ENST00000528165 TBC1D31Q96DN5 1066 aa16.05■□□□□ 0.16
CAPN1-214ENST00000528165 FAXDC2Q96IV6 333 aa16.05■□□□□ 0.16
CAPN1-214ENST00000528165 NOD2Q9HC29 1040 aa16.05■□□□□ 0.16
CAPN1-214ENST00000528165 BLOC1S4Q9NUP1 217 aa16.05■□□□□ 0.16
CAPN1-214ENST00000528165 ARPP21Q9UBL0 812 aaPredicted RBP16.05■□□□□ 0.16
CAPN1-214ENST00000528165 MAD2L2Q9UI95 211 aa16.05■□□□□ 0.16
CAPN1-214ENST00000528165 NUP98P52948 1817 aa16.05■□□□□ 0.16
CAPN1-214ENST00000528165 CACNA1SQ13698 1873 aa16.04■□□□□ 0.16
CAPN1-214ENST00000528165 CCT8L1PA6NM43 557 aa16.04■□□□□ 0.16
CAPN1-214ENST00000528165 TRAF5O00463 557 aa16.04■□□□□ 0.16
CAPN1-214ENST00000528165 PPP1R12BO60237 982 aaPredicted RBP16.04■□□□□ 0.16
CAPN1-214ENST00000528165 TXKP42681 527 aa16.04■□□□□ 0.16
CAPN1-214ENST00000528165 FKBP3Q00688 224 aaKnown RBP16.04■□□□□ 0.16
CAPN1-214ENST00000528165 TFAP4Q01664 338 aa16.04■□□□□ 0.16
CAPN1-214ENST00000528165 SATB1Q01826 763 aa16.04■□□□□ 0.16
CAPN1-214ENST00000528165 GRB10Q13322 594 aa16.04■□□□□ 0.16
CAPN1-214ENST00000528165 DGKHQ86XP1 1220 aa16.04■□□□□ 0.16
CAPN1-214ENST00000528165 ZNF384Q8TF68 577 aa16.04■□□□□ 0.16
CAPN1-214ENST00000528165 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.04■□□□□ 0.162e-7■■■■□ 26.5
CAPN1-214ENST00000528165 TRIM6Q9C030 488 aaPredicted RBP16.04■□□□□ 0.16
CAPN1-214ENST00000528165 NOC2LQ9Y3T9 749 aaKnown RBP16.04■□□□□ 0.16
CAPN1-214ENST00000528165 CCDC188H7C350 402 aa16.04■□□□□ 0.16
CAPN1-214ENST00000528165 PPIP5K2O43314 1243 aa16.04■□□□□ 0.16
CAPN1-214ENST00000528165 BUB1BO60566 1050 aaPredicted RBP16.04■□□□□ 0.16
CAPN1-214ENST00000528165 CTNND1O60716 968 aaKnown RBP16.04■□□□□ 0.16
CAPN1-214ENST00000528165 NAPAP54920 295 aa16.04■□□□□ 0.16
CAPN1-214ENST00000528165 DHX9Q08211 1270 aaKnown RBP16.04■□□□□ 0.16
CAPN1-214ENST00000528165 CUL5Q93034 780 aa16.04■□□□□ 0.16
CAPN1-214ENST00000528165 XPO6Q96QU8 1125 aaKnown RBP16.04■□□□□ 0.16
CAPN1-214ENST00000528165 GOLPH3Q9H4A6 298 aa16.04■□□□□ 0.16
CAPN1-214ENST00000528165 BTNL10A8MVZ5 291 aa16.04■□□□□ 0.16
CAPN1-214ENST00000528165 CYTH3O43739 400 aa16.04■□□□□ 0.16
CAPN1-214ENST00000528165 PTPROQ16827 1216 aa16.04■□□□□ 0.16
CAPN1-214ENST00000528165 SLC4A8Q2Y0W8 1093 aa16.04■□□□□ 0.16
CAPN1-214ENST00000528165 CAVIN4Q5BKX8 364 aa16.04■□□□□ 0.16
CAPN1-214ENST00000528165 MYOCDQ8IZQ8 938 aa16.04■□□□□ 0.16
CAPN1-214ENST00000528165 CCDC26Q8TAB7 109 aa16.04■□□□□ 0.16
CAPN1-214ENST00000528165 CARD10Q9BWT7 1032 aa16.04■□□□□ 0.16
CAPN1-214ENST00000528165 ATP8A2Q9NTI2 1148 aa16.04■□□□□ 0.16
CAPN1-214ENST00000528165 AMACRQ9UHK6 382 aa16.04■□□□□ 0.16
CAPN1-214ENST00000528165 COL1A1P02452 1464 aaPredicted RBP16.03■□□□□ 0.16
CAPN1-214ENST00000528165 F8VZ95 297 aa16.03■□□□□ 0.16
CAPN1-214ENST00000528165 F8W031 263 aaPredicted RBP16.03■□□□□ 0.16
CAPN1-214ENST00000528165 PSMD2Q13200 908 aa16.03■□□□□ 0.16
CAPN1-214ENST00000528165 ERMARDQ5T6L9 678 aa16.03■□□□□ 0.16
CAPN1-214ENST00000528165 LRCH2Q5VUJ6 765 aa16.03■□□□□ 0.16
CAPN1-214ENST00000528165 MDM1Q8TC05 714 aa16.03■□□□□ 0.16
CAPN1-214ENST00000528165 FAM129AQ9BZQ8 928 aa16.03■□□□□ 0.16
CAPN1-214ENST00000528165 ZMYND12Q9H0C1 365 aa16.03■□□□□ 0.16
CAPN1-214ENST00000528165 AIPL1Q9NZN9 384 aa16.03■□□□□ 0.16
CAPN1-214ENST00000528165 BHMG1C9JSJ3 638 aaPredicted RBP16.03■□□□□ 0.16
CAPN1-214ENST00000528165 SLC35G1Q2M3R5 365 aa16.03■□□□□ 0.16
CAPN1-214ENST00000528165 C10orf76Q5T2E6 689 aa16.03■□□□□ 0.16
CAPN1-214ENST00000528165 CCDC63Q8NA47 563 aa16.03■□□□□ 0.16
CAPN1-214ENST00000528165 GLIS3Q8NEA6 775 aa16.03■□□□□ 0.16
CAPN1-214ENST00000528165 TBC1D22AQ8WUA7 517 aa16.03■□□□□ 0.16
CAPN1-214ENST00000528165 SLITRK6Q9H5Y7 841 aa16.03■□□□□ 0.16
CAPN1-214ENST00000528165 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.03■□□□□ 0.163e-6■■■■■ 38.5
CAPN1-214ENST00000528165 PPP1R12AO14974 1030 aaPredicted RBP16.02■□□□□ 0.16
CAPN1-214ENST00000528165 HOXA7P31268 230 aaPredicted RBP16.02■□□□□ 0.16
CAPN1-214ENST00000528165 EPS15P42566 896 aa16.02■□□□□ 0.16
CAPN1-214ENST00000528165 EIF3BP55884 814 aaKnown RBP16.02■□□□□ 0.16
CAPN1-214ENST00000528165 SLC8A3P57103 927 aa16.02■□□□□ 0.16
CAPN1-214ENST00000528165 FOXR2Q6PJQ5 311 aa16.02■□□□□ 0.16
CAPN1-214ENST00000528165 DDX12PQ92771 950 aa16.02■□□□□ 0.16
CAPN1-214ENST00000528165 CENPTQ96BT3 561 aa16.02■□□□□ 0.16
CAPN1-214ENST00000528165 HOOK2Q96ED9 719 aa16.02■□□□□ 0.16
CAPN1-214ENST00000528165 C6orf50Q9HD87 102 aa16.02■□□□□ 0.16
CAPN1-214ENST00000528165 IL17RBQ9NRM6 502 aa16.02■□□□□ 0.16
CAPN1-214ENST00000528165 UTP11Q9Y3A2 253 aaKnown RBP16.02■□□□□ 0.16
CAPN1-214ENST00000528165 TOGARAM1Q9Y4F4 1720 aa16.02■□□□□ 0.15
CAPN1-214ENST00000528165 A0A1B0GUL6 1792 aa16.02■□□□□ 0.15
CAPN1-214ENST00000528165 SBK1Q52WX2 424 aa16.02■□□□□ 0.15
CAPN1-214ENST00000528165 METTL13Q8N6R0 699 aa16.02■□□□□ 0.15
CAPN1-214ENST00000528165 PNMA5Q96PV4 448 aa16.02■□□□□ 0.15
CAPN1-214ENST00000528165 LRRC27Q9C0I9 530 aa16.02■□□□□ 0.15
CAPN1-214ENST00000528165 FAM114A2Q9NRY5 505 aa16.02■□□□□ 0.15
CAPN1-214ENST00000528165 MCM9Q9NXL9 1143 aa16.02■□□□□ 0.15
CAPN1-214ENST00000528165 SMCO2A6NFE2 343 aa16.01■□□□□ 0.15
CAPN1-214ENST00000528165 TTI1O43156 1089 aa16.01■□□□□ 0.15
CAPN1-214ENST00000528165 GNA11P29992 359 aa16.01■□□□□ 0.15
CAPN1-214ENST00000528165 IL6STP40189 918 aaPredicted RBP16.01■□□□□ 0.15
CAPN1-214ENST00000528165 TMEM266Q2M3C6 531 aa16.01■□□□□ 0.15
CAPN1-214ENST00000528165 ACCSLQ4AC99 568 aa16.01■□□□□ 0.15
CAPN1-214ENST00000528165 HOOK3Q86VS8 718 aa16.01■□□□□ 0.15
CAPN1-214ENST00000528165 KIRREL3Q8IZU9 778 aa16.01■□□□□ 0.15
CAPN1-214ENST00000528165 TBCKQ8TEA7 893 aa16.01■□□□□ 0.15
CAPN1-214ENST00000528165 TCP11Q8WWU5 503 aa16.01■□□□□ 0.15
CAPN1-214ENST00000528165 RAD54LQ92698 747 aa16.01■□□□□ 0.15
CAPN1-214ENST00000528165 NSUN4Q96CB9 384 aaKnown RBP16.01■□□□□ 0.15
CAPN1-214ENST00000528165 TLCD1Q96CP7 247 aa16.01■□□□□ 0.15
CAPN1-214ENST00000528165 SLC4A9Q96Q91 983 aa16.01■□□□□ 0.15
CAPN1-214ENST00000528165 DPH5Q9H2P9 285 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms