RNA–Protein interactions for RNA: ENST00000527149.5

SMCO4-204, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCO4, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-204ENST00000527149 TRIM50Q86XT4 487 aa18.82■□□□□ 0.6
SMCO4-204ENST00000527149 FERMT2Q96AC1 680 aa18.82■□□□□ 0.6
SMCO4-204ENST00000527149 PCYT2Q99447 389 aa18.82■□□□□ 0.6
SMCO4-204ENST00000527149 C16orf70Q9BSU1 422 aa18.82■□□□□ 0.6
SMCO4-204ENST00000527149 UNC45AQ9H3U1 944 aa18.82■□□□□ 0.6
SMCO4-204ENST00000527149 EMSYQ7Z589 1322 aa18.81■□□□□ 0.6
SMCO4-204ENST00000527149 IGKV6D-21A0A0A0MT36 114 aa18.81■□□□□ 0.6
SMCO4-204ENST00000527149 ZEB2O60315 1214 aa18.81■□□□□ 0.6
SMCO4-204ENST00000527149 KPNA6O60684 536 aa18.81■□□□□ 0.6
SMCO4-204ENST00000527149 LGR5O75473 907 aa18.81■□□□□ 0.6
SMCO4-204ENST00000527149 MYL3P08590 195 aa18.81■□□□□ 0.6
SMCO4-204ENST00000527149 ZSCAN22P10073 491 aaPredicted RBP18.81■□□□□ 0.6
SMCO4-204ENST00000527149 TCF7P36402 384 aaPredicted RBP18.81■□□□□ 0.6
SMCO4-204ENST00000527149 ANP32AP39687 249 aaKnown RBP18.81■□□□□ 0.6
SMCO4-204ENST00000527149 RGS19P49795 217 aa18.81■□□□□ 0.6
SMCO4-204ENST00000527149 KRT76Q01546 638 aa18.81■□□□□ 0.6
SMCO4-204ENST00000527149 CALCRLQ16602 461 aa18.81■□□□□ 0.6
SMCO4-204ENST00000527149 ZNF746Q6NUN9 644 aaPredicted RBP18.81■□□□□ 0.6
SMCO4-204ENST00000527149 FAM173BQ6P4H8 233 aa18.81■□□□□ 0.6
SMCO4-204ENST00000527149 ABHD15Q6UXT9 468 aa18.81■□□□□ 0.6
SMCO4-204ENST00000527149 SEPT1Q8WYJ6 367 aa18.81■□□□□ 0.6
SMCO4-204ENST00000527149 MTG1Q9BT17 334 aaPredicted RBP18.81■□□□□ 0.6
SMCO4-204ENST00000527149 TEKT3Q9BXF9 490 aa18.81■□□□□ 0.6
SMCO4-204ENST00000527149 ZDHHC9Q9Y397 364 aa18.81■□□□□ 0.6
SMCO4-204ENST00000527149 HAS3O00219 553 aa18.8■□□□□ 0.6
SMCO4-204ENST00000527149 CABYRO75952 493 aa18.8■□□□□ 0.6
SMCO4-204ENST00000527149 BRD1O95696 1058 aa18.8■□□□□ 0.6
SMCO4-204ENST00000527149 PDIA4P13667 645 aaKnown RBP18.8■□□□□ 0.6
SMCO4-204ENST00000527149 PPP2R5CQ13362 524 aa18.8■□□□□ 0.6
SMCO4-204ENST00000527149 SLC43A3Q8NBI5 491 aa18.8■□□□□ 0.6
SMCO4-204ENST00000527149 SENP6Q9GZR1 1112 aaPredicted RBP18.8■□□□□ 0.6
SMCO4-204ENST00000527149 MYH9P35579 1960 aaKnown RBP18.8■□□□□ 0.6
SMCO4-204ENST00000527149 CAPN15O75808 1086 aa18.79■□□□□ 0.6
SMCO4-204ENST00000527149 F13A1P00488 732 aa18.79■□□□□ 0.6
SMCO4-204ENST00000527149 OR52Z1P0C646 297 aa18.79■□□□□ 0.6
SMCO4-204ENST00000527149 SUPT20HL2P0C7V6 817 aa18.79■□□□□ 0.6
SMCO4-204ENST00000527149 PSMC6P62333 389 aa18.79■□□□□ 0.6
SMCO4-204ENST00000527149 SMAP1Q8IYB5 467 aaPredicted RBP18.79■□□□□ 0.6
SMCO4-204ENST00000527149 GLT1D1Q96MS3 346 aa18.79■□□□□ 0.6
SMCO4-204ENST00000527149 FTOQ9C0B1 505 aaKnown RBP eCLIP18.79■□□□□ 0.6
SMCO4-204ENST00000527149 ZSCAN16Q9H4T2 348 aaPredicted RBP18.79■□□□□ 0.6
SMCO4-204ENST00000527149 STARD7Q9NQZ5 370 aa18.79■□□□□ 0.6
SMCO4-204ENST00000527149 RBM19Q9Y4C8 960 aaKnown RBP18.79■□□□□ 0.6
SMCO4-204ENST00000527149 WDR64B1ANS9 1081 aa18.78■□□□□ 0.6
SMCO4-204ENST00000527149 PTGDRQ13258 359 aa18.78■□□□□ 0.6
SMCO4-204ENST00000527149 LRRC26Q2I0M4 334 aa18.78■□□□□ 0.6
SMCO4-204ENST00000527149 C1orf53Q5VUE5 145 aa18.78■□□□□ 0.6
SMCO4-204ENST00000527149 CCDC60Q8IWA6 550 aaPredicted RBP18.78■□□□□ 0.6
SMCO4-204ENST00000527149 SLFN12Q8IYM2 578 aa18.78■□□□□ 0.6
SMCO4-204ENST00000527149 RDM1Q8NG50 284 aa18.78■□□□□ 0.6
SMCO4-204ENST00000527149 IGSF9BQ9UPX0 1349 aa18.77■□□□□ 0.6
SMCO4-204ENST00000527149 A0A0U1RQG5 324 aaPredicted RBP18.77■□□□□ 0.6
SMCO4-204ENST00000527149 EML1O00423 815 aa18.77■□□□□ 0.6
SMCO4-204ENST00000527149 CHMP2AO43633 222 aa18.77■□□□□ 0.6
SMCO4-204ENST00000527149 PSEN2P49810 448 aa18.77■□□□□ 0.6
SMCO4-204ENST00000527149 CDK7P50613 346 aa18.77■□□□□ 0.6
SMCO4-204ENST00000527149 ATP2C1P98194 919 aaPredicted RBP18.77■□□□□ 0.6
SMCO4-204ENST00000527149 UTP14CQ5TAP6 766 aaKnown RBP18.77■□□□□ 0.6
SMCO4-204ENST00000527149 FOXD4L5Q5VV16 416 aaPredicted RBP18.77■□□□□ 0.6
SMCO4-204ENST00000527149 SLC39A5Q6ZMH5 540 aa18.77■□□□□ 0.6
SMCO4-204ENST00000527149 AFAP1L1Q8TED9 768 aa18.77■□□□□ 0.6
SMCO4-204ENST00000527149 FOXD4L4Q8WXT5 416 aaPredicted RBP18.77■□□□□ 0.6
SMCO4-204ENST00000527149 DISC1Q9NRI5 854 aa18.77■□□□□ 0.6
SMCO4-204ENST00000527149 PCDHA10Q9Y5I2 948 aa18.77■□□□□ 0.6
SMCO4-204ENST00000527149 TRIP12Q14669 1992 aaPredicted RBP18.77■□□□□ 0.59
SMCO4-204ENST00000527149 H3BRB1 525 aa18.76■□□□□ 0.59
SMCO4-204ENST00000527149 HOXC8P31273 242 aa18.76■□□□□ 0.59
SMCO4-204ENST00000527149 SFNP31947 248 aa18.76■□□□□ 0.59
SMCO4-204ENST00000527149 JAK3P52333 1124 aa18.76■□□□□ 0.59
SMCO4-204ENST00000527149 ATN1P54259 1190 aaPredicted RBP18.76■□□□□ 0.59
SMCO4-204ENST00000527149 ITGA7Q13683 1181 aa18.76■□□□□ 0.59
SMCO4-204ENST00000527149 MFSD10Q14728 455 aa18.76■□□□□ 0.59
SMCO4-204ENST00000527149 IL17AQ16552 155 aa18.76■□□□□ 0.59
SMCO4-204ENST00000527149 UGCGQ16739 394 aa18.76■□□□□ 0.59
SMCO4-204ENST00000527149 NBPF20Q3BBV1 942 aa18.76■□□□□ 0.59
SMCO4-204ENST00000527149 MIS18BP1Q6P0N0 1132 aa18.76■□□□□ 0.59
SMCO4-204ENST00000527149 PPP1R13LQ8WUF5 828 aa18.76■□□□□ 0.59
SMCO4-204ENST00000527149 TUT1Q9H6E5 874 aaKnown RBP18.76■□□□□ 0.59
SMCO4-204ENST00000527149 TTC12Q9H892 705 aaPredicted RBP18.76■□□□□ 0.59
SMCO4-204ENST00000527149 ARVCFO00192 962 aa18.75■□□□□ 0.59
SMCO4-204ENST00000527149 LAD1O00515 517 aa18.75■□□□□ 0.59
SMCO4-204ENST00000527149 BAG4O95429 457 aaKnown RBP18.75■□□□□ 0.59
SMCO4-204ENST00000527149 PRPHP41219 470 aa18.75■□□□□ 0.59
SMCO4-204ENST00000527149 TXKP42681 527 aa18.75■□□□□ 0.59
SMCO4-204ENST00000527149 PTPAQ15257 358 aa18.75■□□□□ 0.59
SMCO4-204ENST00000527149 KIAA0753Q2KHM9 967 aa18.75■□□□□ 0.59
SMCO4-204ENST00000527149 PLPPR4Q7Z2D5 763 aa18.75■□□□□ 0.59
SMCO4-204ENST00000527149 MIER3Q7Z3K6 550 aa18.75■□□□□ 0.59
SMCO4-204ENST00000527149 SESTD1Q86VW0 696 aa18.75■□□□□ 0.59
SMCO4-204ENST00000527149 USP28Q96RU2 1077 aa18.75■□□□□ 0.59
SMCO4-204ENST00000527149 KATNAL1Q9BW62 490 aa18.75■□□□□ 0.59
SMCO4-204ENST00000527149 TCEAL9Q9UHQ7 104 aa18.75■□□□□ 0.59
SMCO4-204ENST00000527149 PCDHA12Q9UN75 941 aa18.75■□□□□ 0.59
SMCO4-204ENST00000527149 MAFBQ9Y5Q3 323 aaPredicted RBP18.75■□□□□ 0.59
SMCO4-204ENST00000527149 CLIC4Q9Y696 253 aa18.75■□□□□ 0.59
SMCO4-204ENST00000527149 POTEMA6NI47 508 aa18.74■□□□□ 0.59
SMCO4-204ENST00000527149 ZNF862O60290 1169 aa18.74■□□□□ 0.59
SMCO4-204ENST00000527149 ATP4AP20648 1035 aa18.74■□□□□ 0.59
SMCO4-204ENST00000527149 FXR2P51116 673 aaKnown RBP eCLIP18.74■□□□□ 0.59
SMCO4-204ENST00000527149 RTP1P59025 263 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms