RNA–Protein interactions for RNA: ENST00000526627.1

SMIM3-201, Transcript of small integral membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM3, Length 2,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3-201ENST00000526627 RASSF7Q02833 373 aa22.49■■□□□ 1.19
SMIM3-201ENST00000526627 ICA1Q05084 483 aa22.49■■□□□ 1.19
SMIM3-201ENST00000526627 ITIH3Q06033 890 aa22.49■■□□□ 1.19
SMIM3-201ENST00000526627 KLRC3Q07444 240 aa22.49■■□□□ 1.19
SMIM3-201ENST00000526627 Q4G0T1 1027 aa22.49■■□□□ 1.19
SMIM3-201ENST00000526627 PRR16Q569H4 304 aa22.49■■□□□ 1.19
SMIM3-201ENST00000526627 NFRKBQ6P4R8 1299 aa22.49■■□□□ 1.19
SMIM3-201ENST00000526627 CCNI2Q6ZMN8 369 aaPredicted RBP22.49■■□□□ 1.19
SMIM3-201ENST00000526627 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.49■■□□□ 1.19
SMIM3-201ENST00000526627 TAL1P17542 331 aaPredicted RBP22.49■■□□□ 1.19
SMIM3-201ENST00000526627 MMP14P50281 582 aa22.49■■□□□ 1.19
SMIM3-201ENST00000526627 POLR2FP61218 127 aaKnown RBP22.49■■□□□ 1.19
SMIM3-201ENST00000526627 FKBP1AP62942 108 aaKnown RBP22.49■■□□□ 1.19
SMIM3-201ENST00000526627 JAG1P78504 1218 aa22.49■■□□□ 1.19
SMIM3-201ENST00000526627 SFMBT2Q5VUG0 894 aa22.49■■□□□ 1.19
SMIM3-201ENST00000526627 KRT27Q7Z3Y8 459 aa22.49■■□□□ 1.19
SMIM3-201ENST00000526627 CRACR2AQ9BSW2 395 aa22.49■■□□□ 1.19
SMIM3-201ENST00000526627 AMNQ9BXJ7 453 aa22.49■■□□□ 1.19
SMIM3-201ENST00000526627 QTRT2Q9H974 415 aaKnown RBP22.49■■□□□ 1.19
SMIM3-201ENST00000526627 FAM86B1E9PN63 330 aa22.48■■□□□ 1.19
SMIM3-201ENST00000526627 SERPING1P05155 500 aa22.48■■□□□ 1.19
SMIM3-201ENST00000526627 FAM86B2P0C5J1 330 aa22.48■■□□□ 1.19
SMIM3-201ENST00000526627 AARSP49588 968 aaKnown RBP eCLIP22.48■■□□□ 1.19
SMIM3-201ENST00000526627 HDLBPQ00341 1268 aaKnown RBP22.48■■□□□ 1.19
SMIM3-201ENST00000526627 GIT2Q14161 759 aa22.48■■□□□ 1.19
SMIM3-201ENST00000526627 EDRF1Q3B7T1 1238 aa22.48■■□□□ 1.19
SMIM3-201ENST00000526627 STRIP1Q5VSL9 837 aa22.48■■□□□ 1.19
SMIM3-201ENST00000526627 TMEM179Q6ZVK1 233 aa22.48■■□□□ 1.19
SMIM3-201ENST00000526627 GMCL1P1Q8NEA9 526 aa22.48■■□□□ 1.19
SMIM3-201ENST00000526627 FAM71BQ8TC56 605 aa22.48■■□□□ 1.19
SMIM3-201ENST00000526627 NUCKS1Q9H1E3 243 aaKnown RBP22.48■■□□□ 1.19
SMIM3-201ENST00000526627 HPCAL4Q9UM19 191 aa22.48■■□□□ 1.19
SMIM3-201ENST00000526627 TBX3O15119 743 aa22.48■■□□□ 1.19
SMIM3-201ENST00000526627 NPM3O75607 178 aaKnown RBP22.48■■□□□ 1.19
SMIM3-201ENST00000526627 GDF11O95390 407 aa22.48■■□□□ 1.19
SMIM3-201ENST00000526627 NDUFB10O96000 172 aa22.48■■□□□ 1.19
SMIM3-201ENST00000526627 MAP9Q49MG5 647 aa22.48■■□□□ 1.19
SMIM3-201ENST00000526627 SLC9C1Q4G0N8 1177 aa22.48■■□□□ 1.19
SMIM3-201ENST00000526627 GSPT2Q8IYD1 628 aaKnown RBP22.48■■□□□ 1.19
SMIM3-201ENST00000526627 AKT1S1Q96B36 256 aa22.48■■□□□ 1.19
SMIM3-201ENST00000526627 ALS2CR12Q96Q35 445 aa22.48■■□□□ 1.19
SMIM3-201ENST00000526627 TLR10Q9BXR5 811 aa22.48■■□□□ 1.19
SMIM3-201ENST00000526627 HYOU1Q9Y4L1 999 aa22.48■■□□□ 1.19
SMIM3-201ENST00000526627 OPLAHO14841 1288 aa22.47■■□□□ 1.19
SMIM3-201ENST00000526627 NCK2O43639 380 aa22.47■■□□□ 1.19
SMIM3-201ENST00000526627 MMP10P09238 476 aa22.47■■□□□ 1.19
SMIM3-201ENST00000526627 TCP1P17987 556 aaKnown RBP22.47■■□□□ 1.19
SMIM3-201ENST00000526627 HOXD13P35453 343 aa22.47■■□□□ 1.19
SMIM3-201ENST00000526627 SREBF1P36956 1147 aa22.47■■□□□ 1.19
SMIM3-201ENST00000526627 ADAM9Q13443 819 aa22.47■■□□□ 1.19
SMIM3-201ENST00000526627 EZH2Q15910 746 aaKnown RBP22.47■■□□□ 1.19
SMIM3-201ENST00000526627 TDRD12Q587J7 1177 aaKnown RBP22.47■■□□□ 1.19
SMIM3-201ENST00000526627 KLHDC7AQ5VTJ3 777 aa22.47■■□□□ 1.19
SMIM3-201ENST00000526627 HAUS3Q68CZ6 603 aa22.47■■□□□ 1.19
SMIM3-201ENST00000526627 IQCEQ6IPM2 695 aa22.47■■□□□ 1.19
SMIM3-201ENST00000526627 DPY19L2P1Q6NXN4 242 aa22.47■■□□□ 1.19
SMIM3-201ENST00000526627 SPATA4Q8NEY3 305 aa22.47■■□□□ 1.19
SMIM3-201ENST00000526627 CCDC102AQ96A19 550 aa22.47■■□□□ 1.19
SMIM3-201ENST00000526627 GMCL1Q96IK5 515 aa22.47■■□□□ 1.19
SMIM3-201ENST00000526627 GANQ9H2C0 597 aa22.47■■□□□ 1.19
SMIM3-201ENST00000526627 FAM184BQ9ULE4 1060 aa22.47■■□□□ 1.19
SMIM3-201ENST00000526627 MEIS1O00470 390 aa22.47■■□□□ 1.19
SMIM3-201ENST00000526627 SYF2O95926 243 aaKnown RBP22.47■■□□□ 1.19
SMIM3-201ENST00000526627 RPA1P27694 616 aa22.47■■□□□ 1.19
SMIM3-201ENST00000526627 PPP4R3CPQ6ZMV5 832 aa22.47■■□□□ 1.19
SMIM3-201ENST00000526627 SYT2Q8N9I0 419 aaPredicted RBP22.47■■□□□ 1.19
SMIM3-201ENST00000526627 HDAC7Q8WUI4 952 aa22.47■■□□□ 1.19
SMIM3-201ENST00000526627 MED4Q9NPJ6 270 aa22.47■■□□□ 1.19
SMIM3-201ENST00000526627 SMARCAL1Q9NZC9 954 aa22.47■■□□□ 1.19
SMIM3-201ENST00000526627 CALCOCO1Q9P1Z2 691 aa22.47■■□□□ 1.19
SMIM3-201ENST00000526627 LMAN1P49257 510 aa22.46■■□□□ 1.19
SMIM3-201ENST00000526627 RBM5P52756 815 aaKnown RBP eCLIP22.46■■□□□ 1.19
SMIM3-201ENST00000526627 USH1GQ495M9 461 aa22.46■■□□□ 1.19
SMIM3-201ENST00000526627 SYDE2Q5VT97 1194 aa22.46■■□□□ 1.19
SMIM3-201ENST00000526627 EPM2AIP1Q7L775 607 aaPredicted RBP22.46■■□□□ 1.19
SMIM3-201ENST00000526627 FBXO11Q86XK2 927 aa22.46■■□□□ 1.19
SMIM3-201ENST00000526627 RNF10Q8N5U6 811 aaKnown RBP22.46■■□□□ 1.19
SMIM3-201ENST00000526627 BUB1O43683 1085 aa22.46■■□□□ 1.19
SMIM3-201ENST00000526627 KRT18P05783 430 aaKnown RBP22.46■■□□□ 1.19
SMIM3-201ENST00000526627 CXCR5P32302 372 aa22.46■■□□□ 1.19
SMIM3-201ENST00000526627 PABPC4Q13310 644 aaKnown RBP eCLIP22.46■■□□□ 1.198e-9■■■■□ 20.9
SMIM3-201ENST00000526627 RRP1BQ14684 758 aaKnown RBP22.46■■□□□ 1.19
SMIM3-201ENST00000526627 ABCB5Q2M3G0 1257 aa22.46■■□□□ 1.19
SMIM3-201ENST00000526627 PSMB7Q99436 277 aa22.46■■□□□ 1.19
SMIM3-201ENST00000526627 REEP2Q9BRK0 252 aa22.46■■□□□ 1.19
SMIM3-201ENST00000526627 TMX4Q9H1E5 349 aaPredicted RBP22.46■■□□□ 1.19
SMIM3-201ENST00000526627 ACBD3Q9H3P7 528 aa22.46■■□□□ 1.19
SMIM3-201ENST00000526627 ZHX3Q9H4I2 956 aa22.46■■□□□ 1.19
SMIM3-201ENST00000526627 EHD2Q9NZN4 543 aa22.46■■□□□ 1.19
SMIM3-201ENST00000526627 ECE2O60344 883 aa22.45■■□□□ 1.18
SMIM3-201ENST00000526627 CIITAP33076 1130 aa22.45■■□□□ 1.18
SMIM3-201ENST00000526627 TNNT3P45378 269 aaPredicted RBP22.45■■□□□ 1.18
SMIM3-201ENST00000526627 MCTP2Q6DN12 878 aa22.45■■□□□ 1.18
SMIM3-201ENST00000526627 ZNF622Q969S3 477 aaKnown RBP eCLIP22.45■■□□□ 1.18
SMIM3-201ENST00000526627 NOX5Q96PH1 765 aa22.45■■□□□ 1.18
SMIM3-201ENST00000526627 LRRC1Q9BTT6 524 aa22.45■■□□□ 1.18
SMIM3-201ENST00000526627 AIPL1Q9NZN9 384 aa22.45■■□□□ 1.18
SMIM3-201ENST00000526627 VAV3Q9UKW4 847 aa22.45■■□□□ 1.18
SMIM3-201ENST00000526627 TRAF3IP3Q9Y228 551 aa22.45■■□□□ 1.18
SMIM3-201ENST00000526627 NR2F2P24468 414 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms