RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 Q6ZUG5 572 aa6.77□□□□□ -1.33
CSDE1-210ENST00000525878 RBM12BQ8IXT5 1001 aaKnown RBP6.77□□□□□ -1.33
CSDE1-210ENST00000525878 OSBP2Q969R2 916 aa6.77□□□□□ -1.33
CSDE1-210ENST00000525878 GMLQ99445 158 aa6.77□□□□□ -1.33
CSDE1-210ENST00000525878 AARSD1Q9BTE6 412 aaKnown RBP6.77□□□□□ -1.33
CSDE1-210ENST00000525878 SCAND2PQ9GZW5 306 aaPredicted RBP6.77□□□□□ -1.33
CSDE1-210ENST00000525878 SEC61A2Q9H9S3 476 aa6.77□□□□□ -1.33
CSDE1-210ENST00000525878 KCND1Q9NSA2 647 aa6.77□□□□□ -1.33
CSDE1-210ENST00000525878 SRRDQ9UH36 339 aa6.77□□□□□ -1.33
CSDE1-210ENST00000525878 ZDHHC9Q9Y397 364 aa6.77□□□□□ -1.33
CSDE1-210ENST00000525878 NKRFO15226 690 aaKnown RBP eCLIP6.76□□□□□ -1.33
CSDE1-210ENST00000525878 LTFP02788 710 aa6.76□□□□□ -1.33
CSDE1-210ENST00000525878 ACVRL1P37023 503 aa6.76□□□□□ -1.33
CSDE1-210ENST00000525878 SELENOPP49908 381 aa6.76□□□□□ -1.33
CSDE1-210ENST00000525878 KIZQ2M2Z5 673 aa6.76□□□□□ -1.33
CSDE1-210ENST00000525878 PHF19Q5T6S3 580 aa6.76□□□□□ -1.33
CSDE1-210ENST00000525878 STYK1Q6J9G0 422 aa6.76□□□□□ -1.33
CSDE1-210ENST00000525878 KATNBL1Q9H079 304 aa6.76□□□□□ -1.33
CSDE1-210ENST00000525878 JADE2Q9NQC1 790 aa6.76□□□□□ -1.33
CSDE1-210ENST00000525878 ST7Q9NRC1 585 aa6.76□□□□□ -1.33
CSDE1-210ENST00000525878 SLC4A7Q9Y6M7 1214 aa6.76□□□□□ -1.33
CSDE1-210ENST00000525878 COL6A2P12110 1019 aa6.75□□□□□ -1.33
CSDE1-210ENST00000525878 SPIRE1Q08AE8 756 aa6.75□□□□□ -1.33
CSDE1-210ENST00000525878 SKIDA1Q1XH10 827 aa6.75□□□□□ -1.33
CSDE1-210ENST00000525878 CD276Q5ZPR3 534 aa6.75□□□□□ -1.33
CSDE1-210ENST00000525878 ZNF585AQ6P3V2 769 aa6.75□□□□□ -1.33
CSDE1-210ENST00000525878 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.75□□□□□ -1.33
CSDE1-210ENST00000525878 Q8TCH9 128 aa6.75□□□□□ -1.33
CSDE1-210ENST00000525878 ZNF747Q9BV97 191 aa6.75□□□□□ -1.33
CSDE1-210ENST00000525878 SEMA4AQ9H3S1 761 aa6.75□□□□□ -1.33
CSDE1-210ENST00000525878 DEF6Q9H4E7 631 aa6.75□□□□□ -1.33
CSDE1-210ENST00000525878 ZFP69BQ9UJL9 534 aa6.75□□□□□ -1.33
CSDE1-210ENST00000525878 TESMINQ9Y4I5 508 aa6.75□□□□□ -1.33
CSDE1-210ENST00000525878 NUB1Q9Y5A7 615 aa6.75□□□□□ -1.33
CSDE1-210ENST00000525878 ZNF839A8K0R7 811 aa6.74□□□□□ -1.33
CSDE1-210ENST00000525878 ZNF623O75123 536 aa6.74□□□□□ -1.33
CSDE1-210ENST00000525878 ENO2P09104 434 aaPredicted RBP6.74□□□□□ -1.33
CSDE1-210ENST00000525878 PABPC1P11940 636 aaKnown RBP6.74□□□□□ -1.33
CSDE1-210ENST00000525878 CSF2RBP32927 897 aa6.74□□□□□ -1.33
CSDE1-210ENST00000525878 GPR85P60893 370 aa6.74□□□□□ -1.33
CSDE1-210ENST00000525878 PFKPQ01813 784 aa6.74□□□□□ -1.33
CSDE1-210ENST00000525878 ANKS3Q6ZW76 656 aa6.74□□□□□ -1.33
CSDE1-210ENST00000525878 SLC43A3Q8NBI5 491 aa6.74□□□□□ -1.33
CSDE1-210ENST00000525878 ST13P5Q8NFI4 369 aaPredicted RBP6.74□□□□□ -1.33
CSDE1-210ENST00000525878 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.74□□□□□ -1.33
CSDE1-210ENST00000525878 IQCA1LA6NCM1 817 aa6.73□□□□□ -1.33
CSDE1-210ENST00000525878 ACOT7O00154 380 aa6.73□□□□□ -1.33
CSDE1-210ENST00000525878 PRODHO43272 600 aa6.73□□□□□ -1.33
CSDE1-210ENST00000525878 IL18BPO95998 194 aa6.73□□□□□ -1.33
CSDE1-210ENST00000525878 GNAT1P11488 350 aa6.73□□□□□ -1.33
CSDE1-210ENST00000525878 RALYLQ86SE5 291 aaKnown RBP6.73□□□□□ -1.33
CSDE1-210ENST00000525878 REXO1L1PQ8IX06 675 aa6.73□□□□□ -1.33
CSDE1-210ENST00000525878 ARHGAP20Q9P2F6 1191 aa6.73□□□□□ -1.33
CSDE1-210ENST00000525878 DSEQ9UL01 958 aa6.73□□□□□ -1.33
CSDE1-210ENST00000525878 R3HCC1Q9Y3T6 440 aaKnown RBP6.73□□□□□ -1.33
CSDE1-210ENST00000525878 TCAF1Q9Y4C2 921 aa6.73□□□□□ -1.33
CSDE1-210ENST00000525878 CYR61O00622 381 aa6.72□□□□□ -1.33
CSDE1-210ENST00000525878 FBXO21O94952 628 aa6.72□□□□□ -1.33
CSDE1-210ENST00000525878 SLPIP03973 132 aa6.72□□□□□ -1.33
CSDE1-210ENST00000525878 SOD2P04179 222 aa6.72□□□□□ -1.33
CSDE1-210ENST00000525878 GDF5P43026 501 aa6.72□□□□□ -1.33
CSDE1-210ENST00000525878 KRTAP5-3Q6L8H2 238 aa6.72□□□□□ -1.33
CSDE1-210ENST00000525878 NSMFQ6X4W1 530 aa6.72□□□□□ -1.33
CSDE1-210ENST00000525878 KCTD1Q719H9 257 aa6.72□□□□□ -1.33
CSDE1-210ENST00000525878 PALM2Q8IXS6 379 aa6.72□□□□□ -1.33
CSDE1-210ENST00000525878 IFNL3Q8IZI9 196 aa6.72□□□□□ -1.33
CSDE1-210ENST00000525878 STPG3Q8N7X2 389 aa6.72□□□□□ -1.33
CSDE1-210ENST00000525878 KCNJ15Q99712 375 aa6.72□□□□□ -1.33
CSDE1-210ENST00000525878 ASXL2Q76L83 1435 aa6.71□□□□□ -1.34
CSDE1-210ENST00000525878 MUSKO15146 869 aa6.71□□□□□ -1.34
CSDE1-210ENST00000525878 DNAJA1P31689 397 aaKnown RBP6.71□□□□□ -1.34
CSDE1-210ENST00000525878 GLRBP48167 497 aa6.71□□□□□ -1.34
CSDE1-210ENST00000525878 TCTN3Q6NUS6 607 aa6.71□□□□□ -1.34
CSDE1-210ENST00000525878 SH3RF2Q8TEC5 729 aa6.71□□□□□ -1.34
CSDE1-210ENST00000525878 ZNF669Q96BR6 464 aaPredicted RBP6.71□□□□□ -1.34
CSDE1-210ENST00000525878 VPS11Q9H270 941 aa6.71□□□□□ -1.34
CSDE1-210ENST00000525878 TCRBV5S4A2TA0A5A2 114 aa6.7□□□□□ -1.34
CSDE1-210ENST00000525878 FAM47E-STBD1D6RA91 191 aa6.7□□□□□ -1.34
CSDE1-210ENST00000525878 SUV39H1O43463 412 aa6.7□□□□□ -1.34
CSDE1-210ENST00000525878 FOXS1O43638 330 aa6.7□□□□□ -1.34
CSDE1-210ENST00000525878 FZD7O75084 574 aa6.7□□□□□ -1.34
CSDE1-210ENST00000525878 AMHP03971 560 aa6.7□□□□□ -1.34
CSDE1-210ENST00000525878 SPDYAQ5MJ70 313 aa6.7□□□□□ -1.34
CSDE1-210ENST00000525878 YOD1Q5VVQ6 348 aaPredicted RBP6.7□□□□□ -1.34
CSDE1-210ENST00000525878 HOMEZQ8IX15 550 aa6.7□□□□□ -1.34
CSDE1-210ENST00000525878 GNRHR2Q96P88 292 aa6.7□□□□□ -1.34
CSDE1-210ENST00000525878 IPPKQ9H8X2 491 aa6.7□□□□□ -1.34
CSDE1-210ENST00000525878 TRAV20A0A0B4J274 112 aa6.69□□□□□ -1.34
CSDE1-210ENST00000525878 BLACEA4D250 179 aa6.69□□□□□ -1.34
CSDE1-210ENST00000525878 H0Y858 1186 aa6.69□□□□□ -1.34
CSDE1-210ENST00000525878 WNT9AO14904 365 aa6.69□□□□□ -1.34
CSDE1-210ENST00000525878 IFRD2Q12894 506 aaPredicted RBP6.69□□□□□ -1.34
CSDE1-210ENST00000525878 GPR155Q7Z3F1 870 aa6.69□□□□□ -1.34
CSDE1-210ENST00000525878 LMF1Q96S06 567 aa6.69□□□□□ -1.34
CSDE1-210ENST00000525878 ZNF888P0CJ79 500 aaPredicted RBP6.68□□□□□ -1.34
CSDE1-210ENST00000525878 DBPQ10586 325 aaPredicted RBP6.68□□□□□ -1.34
CSDE1-210ENST00000525878 RAB33AQ14088 237 aa6.68□□□□□ -1.34
CSDE1-210ENST00000525878 USP10Q14694 798 aaKnown RBP6.68□□□□□ -1.34
CSDE1-210ENST00000525878 LRRC47Q8N1G4 583 aaKnown RBP6.68□□□□□ -1.34
CSDE1-210ENST00000525878 TACO1Q9BSH4 297 aaKnown RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms