RNA–Protein interactions for RNA: ENST00000524533.1

HIF3A-208, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 507 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-208ENST00000524533 TELO2Q9Y4R8 837 aa18.7■□□□□ 0.58
HIF3A-208ENST00000524533 SLC12A7Q9Y666 1083 aa18.7■□□□□ 0.58
HIF3A-208ENST00000524533 TCF7P36402 384 aaPredicted RBP18.69■□□□□ 0.58
HIF3A-208ENST00000524533 HTRA4P83105 476 aaPredicted RBP18.69■□□□□ 0.58
HIF3A-208ENST00000524533 COL9A3Q14050 684 aaPredicted RBP18.69■□□□□ 0.58
HIF3A-208ENST00000524533 UBE2SQ16763 222 aa18.69■□□□□ 0.58
HIF3A-208ENST00000524533 FBXO22Q8NEZ5 403 aa18.69■□□□□ 0.58
HIF3A-208ENST00000524533 ANO2Q9NQ90 1003 aa18.69■□□□□ 0.58
HIF3A-208ENST00000524533 NRCAMQ92823 1304 aa18.69■□□□□ 0.58
HIF3A-208ENST00000524533 hCG_1642624A0A1W2PR95 340 aa18.68■□□□□ 0.58
HIF3A-208ENST00000524533 SPDYE3A6NKU9 549 aa18.68■□□□□ 0.58
HIF3A-208ENST00000524533 KCNA2P16389 499 aa18.68■□□□□ 0.58
HIF3A-208ENST00000524533 ADAM17P78536 824 aa18.68■□□□□ 0.58
HIF3A-208ENST00000524533 TMTC3Q6ZXV5 915 aa18.68■□□□□ 0.58
HIF3A-208ENST00000524533 MICU3Q86XE3 530 aa18.68■□□□□ 0.58
HIF3A-208ENST00000524533 SP7Q8TDD2 431 aaPredicted RBP18.68■□□□□ 0.58
HIF3A-208ENST00000524533 C17orf80Q9BSJ5 609 aa18.68■□□□□ 0.58
HIF3A-208ENST00000524533 LRRC2Q9BYS8 371 aa18.68■□□□□ 0.58
HIF3A-208ENST00000524533 NLRC5Q86WI3 1866 aa18.68■□□□□ 0.58
HIF3A-208ENST00000524533 KAT6AQ92794 2004 aa18.67■□□□□ 0.58
HIF3A-208ENST00000524533 RALGAPA2Q2PPJ7 1873 aa18.67■□□□□ 0.58
HIF3A-208ENST00000524533 ATP9AO75110 1047 aa18.67■□□□□ 0.58
HIF3A-208ENST00000524533 ITGB5P18084 799 aa18.67■□□□□ 0.58
HIF3A-208ENST00000524533 COL9A1P20849 921 aa18.67■□□□□ 0.58
HIF3A-208ENST00000524533 MTMR1Q13613 665 aa18.67■□□□□ 0.58
HIF3A-208ENST00000524533 NECTIN1Q15223 517 aa18.67■□□□□ 0.58
HIF3A-208ENST00000524533 HEATR3Q7Z4Q2 680 aa18.67■□□□□ 0.58
HIF3A-208ENST00000524533 CCDC82Q8N4S0 544 aa18.67■□□□□ 0.58
HIF3A-208ENST00000524533 FANCBQ8NB91 859 aa18.67■□□□□ 0.58
HIF3A-208ENST00000524533 APBB2Q92870 758 aa18.67■□□□□ 0.58
HIF3A-208ENST00000524533 YME1L1Q96TA2 773 aa18.67■□□□□ 0.58
HIF3A-208ENST00000524533 IFIH1Q9BYX4 1025 aaKnown RBP18.67■□□□□ 0.58
HIF3A-208ENST00000524533 OSBPL7Q9BZF2 842 aa18.67■□□□□ 0.58
HIF3A-208ENST00000524533 PKD2L1Q9P0L9 805 aa18.67■□□□□ 0.58
HIF3A-208ENST00000524533 PPFIA1Q13136 1202 aa18.66■□□□□ 0.58
HIF3A-208ENST00000524533 FAM26DQ5JW98 314 aa18.66■□□□□ 0.58
HIF3A-208ENST00000524533 SGMS1Q86VZ5 419 aa18.66■□□□□ 0.58
HIF3A-208ENST00000524533 TOP1MTQ969P6 601 aa18.66■□□□□ 0.58
HIF3A-208ENST00000524533 EHMT1Q9H9B1 1298 aa18.66■□□□□ 0.58
HIF3A-208ENST00000524533 UBIAD1Q9Y5Z9 338 aa18.66■□□□□ 0.58
HIF3A-208ENST00000524533 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.65■□□□□ 0.58
HIF3A-208ENST00000524533 UPP2O95045 317 aa18.65■□□□□ 0.58
HIF3A-208ENST00000524533 MARK3P27448 753 aa18.65■□□□□ 0.58
HIF3A-208ENST00000524533 RNF20Q5VTR2 975 aa18.65■□□□□ 0.58
HIF3A-208ENST00000524533 TAF2Q6P1X5 1199 aa18.65■□□□□ 0.58
HIF3A-208ENST00000524533 SYNE3Q6ZMZ3 975 aa18.65■□□□□ 0.58
HIF3A-208ENST00000524533 RUFY4Q6ZNE9 571 aa18.65■□□□□ 0.58
HIF3A-208ENST00000524533 SEPT1Q8WYJ6 367 aa18.65■□□□□ 0.58
HIF3A-208ENST00000524533 SAMD11Q96NU1 681 aa18.65■□□□□ 0.58
HIF3A-208ENST00000524533 ERAP1Q9NZ08 941 aa18.65■□□□□ 0.58
HIF3A-208ENST00000524533 PCDHA6Q9UN73 950 aa18.65■□□□□ 0.58
HIF3A-208ENST00000524533 PCDHA8Q9Y5H6 950 aa18.65■□□□□ 0.58
HIF3A-208ENST00000524533 GSTTP1A0A1W2PQM5 241 aa18.64■□□□□ 0.57
HIF3A-208ENST00000524533 GRIK4Q16099 956 aa18.64■□□□□ 0.57
HIF3A-208ENST00000524533 EPC2Q52LR7 807 aa18.64■□□□□ 0.57
HIF3A-208ENST00000524533 RSPH3Q86UC2 560 aa18.64■□□□□ 0.57
HIF3A-208ENST00000524533 GLG1Q92896 1179 aa18.64■□□□□ 0.57
HIF3A-208ENST00000524533 UBE2ZQ9H832 354 aaPredicted RBP18.64■□□□□ 0.57
HIF3A-208ENST00000524533 JADE2Q9NQC1 790 aa18.64■□□□□ 0.57
HIF3A-208ENST00000524533 TUBE1Q9UJT0 475 aa18.64■□□□□ 0.57
HIF3A-208ENST00000524533 CNTNAP5Q8WYK1 1306 aa18.64■□□□□ 0.57
HIF3A-208ENST00000524533 GHRP10912 638 aa18.63■□□□□ 0.57
HIF3A-208ENST00000524533 WWC2Q6AWC2 1192 aa18.63■□□□□ 0.57
HIF3A-208ENST00000524533 APOA5Q6Q788 366 aa18.63■□□□□ 0.57
HIF3A-208ENST00000524533 RPAINQ86UA6 219 aa18.63■□□□□ 0.57
HIF3A-208ENST00000524533 SMARCAD1Q9H4L7 1026 aa18.63■□□□□ 0.57
HIF3A-208ENST00000524533 RBM28Q9NW13 759 aaKnown RBP18.63■□□□□ 0.57
HIF3A-208ENST00000524533 MAFGO15525 162 aa18.62■□□□□ 0.57
HIF3A-208ENST00000524533 CHRNA1P02708 482 aa18.62■□□□□ 0.57
HIF3A-208ENST00000524533 NAPAP54920 295 aa18.62■□□□□ 0.57
HIF3A-208ENST00000524533 MGAT3Q09327 533 aa18.62■□□□□ 0.57
HIF3A-208ENST00000524533 PTPROQ16827 1216 aa18.62■□□□□ 0.57
HIF3A-208ENST00000524533 BMP2KLQ5H9B9 411 aa18.62■□□□□ 0.57
HIF3A-208ENST00000524533 PPP1R18Q6NYC8 613 aa18.62■□□□□ 0.57
HIF3A-208ENST00000524533 MRPL38Q96DV4 380 aaKnown RBP18.62■□□□□ 0.57
HIF3A-208ENST00000524533 NEK1Q96PY6 1258 aa18.62■□□□□ 0.57
HIF3A-208ENST00000524533 C1QTNF1Q9BXJ1 281 aa18.62■□□□□ 0.57
HIF3A-208ENST00000524533 JPH1Q9HDC5 661 aaPredicted RBP18.62■□□□□ 0.57
HIF3A-208ENST00000524533 BRWD1Q9NSI6 2320 aa18.62■□□□□ 0.57
HIF3A-208ENST00000524533 MBLAC1A4D2B0 266 aaPredicted RBP18.61■□□□□ 0.57
HIF3A-208ENST00000524533 IGBP1P78318 339 aa18.61■□□□□ 0.57
HIF3A-208ENST00000524533 GPM6BQ13491 265 aa18.61■□□□□ 0.57
HIF3A-208ENST00000524533 TIGD5Q53EQ6 642 aa18.61■□□□□ 0.57
HIF3A-208ENST00000524533 TMEM192Q8IY95 271 aa18.61■□□□□ 0.57
HIF3A-208ENST00000524533 SLC9A2Q9UBY0 812 aa18.61■□□□□ 0.57
HIF3A-208ENST00000524533 H3BNC9 293 aa18.6■□□□□ 0.57
HIF3A-208ENST00000524533 ZBTB43O43298 467 aa18.6■□□□□ 0.57
HIF3A-208ENST00000524533 KCNA5P22460 613 aa18.6■□□□□ 0.57
HIF3A-208ENST00000524533 ADCY7P51828 1080 aa18.6■□□□□ 0.57
HIF3A-208ENST00000524533 LPIN1Q14693 890 aa18.6■□□□□ 0.57
HIF3A-208ENST00000524533 RTN1Q16799 776 aa18.6■□□□□ 0.57
HIF3A-208ENST00000524533 MARCH8Q5T0T0 291 aa18.6■□□□□ 0.57
HIF3A-208ENST00000524533 DNAJB3Q8WWF6 145 aa18.6■□□□□ 0.57
HIF3A-208ENST00000524533 IL17RAQ96F46 866 aa18.6■□□□□ 0.57
HIF3A-208ENST00000524533 PGBD1Q96JS3 809 aa18.6■□□□□ 0.57
HIF3A-208ENST00000524533 TCEANC2Q96MN5 208 aa18.6■□□□□ 0.57
HIF3A-208ENST00000524533 MXRA8Q9BRK3 442 aa18.6■□□□□ 0.57
HIF3A-208ENST00000524533 SDF4Q9BRK5 362 aa18.6■□□□□ 0.57
HIF3A-208ENST00000524533 AZI2Q9H6S1 392 aa18.6■□□□□ 0.57
HIF3A-208ENST00000524533 RIC8AQ9NPQ8 531 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms