RNA–Protein interactions for RNA: ENST00000524442.1

TTC39A-213, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 3

Gene TTC39A, Length 413 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-213ENST00000524442 SP4Q02446 784 aa11.47□□□□□ -0.57
TTC39A-213ENST00000524442 ZNF746Q6NUN9 644 aaPredicted RBP11.47□□□□□ -0.57
TTC39A-213ENST00000524442 PIK3AP1Q6ZUJ8 805 aa11.47□□□□□ -0.57
TTC39A-213ENST00000524442 SH3RF1Q7Z6J0 888 aa11.47□□□□□ -0.57
TTC39A-213ENST00000524442 SMAP1Q8IYB5 467 aaPredicted RBP11.47□□□□□ -0.57
TTC39A-213ENST00000524442 OXER1Q8TDS5 423 aa11.47□□□□□ -0.57
TTC39A-213ENST00000524442 TRIM43Q96BQ3 446 aaPredicted RBP11.47□□□□□ -0.57
TTC39A-213ENST00000524442 FOXP1Q9H334 677 aaPredicted RBP11.47□□□□□ -0.57
TTC39A-213ENST00000524442 AZI2Q9H6S1 392 aa11.47□□□□□ -0.57
TTC39A-213ENST00000524442 GTF2IRD1Q9UHL9 959 aa11.47□□□□□ -0.57
TTC39A-213ENST00000524442 BTBD18B2RXH4 712 aa11.46□□□□□ -0.57
TTC39A-213ENST00000524442 TBX3O15119 743 aa11.46□□□□□ -0.57
TTC39A-213ENST00000524442 MSH4O15457 936 aa11.46□□□□□ -0.57
TTC39A-213ENST00000524442 LGR5O75473 907 aa11.46□□□□□ -0.57
TTC39A-213ENST00000524442 GNAT1P11488 350 aa11.46□□□□□ -0.57
TTC39A-213ENST00000524442 SLC26A2P50443 739 aa11.46□□□□□ -0.57
TTC39A-213ENST00000524442 CHMP4BP1P59074 171 aa11.46□□□□□ -0.57
TTC39A-213ENST00000524442 NR5A1Q13285 461 aa11.46□□□□□ -0.57
TTC39A-213ENST00000524442 PTGISQ16647 500 aa11.46□□□□□ -0.57
TTC39A-213ENST00000524442 LETM2Q2VYF4 491 aa11.46□□□□□ -0.57
TTC39A-213ENST00000524442 UTP14CQ5TAP6 766 aaKnown RBP11.46□□□□□ -0.57
TTC39A-213ENST00000524442 MIS18BP1Q6P0N0 1132 aa11.46□□□□□ -0.57
TTC39A-213ENST00000524442 PLPPR4Q7Z2D5 763 aa11.46□□□□□ -0.57
TTC39A-213ENST00000524442 GLG1Q92896 1179 aa11.46□□□□□ -0.57
TTC39A-213ENST00000524442 SLC5A5Q92911 643 aa11.46□□□□□ -0.57
TTC39A-213ENST00000524442 FAM20AQ96MK3 541 aa11.46□□□□□ -0.57
TTC39A-213ENST00000524442 TRPV6Q9H1D0 765 aa11.46□□□□□ -0.57
TTC39A-213ENST00000524442 PRO3102Q9H379 93 aa11.46□□□□□ -0.57
TTC39A-213ENST00000524442 HIPK3Q9H422 1215 aa11.46□□□□□ -0.57
TTC39A-213ENST00000524442 TRMT13Q9NUP7 481 aaKnown RBP11.46□□□□□ -0.57
TTC39A-213ENST00000524442 ERAP1Q9NZ08 941 aa11.46□□□□□ -0.57
TTC39A-213ENST00000524442 HDAC6Q9UBN7 1215 aa11.46□□□□□ -0.57
TTC39A-213ENST00000524442 DDX25Q9UHL0 483 aaKnown RBP11.46□□□□□ -0.57
TTC39A-213ENST00000524442 NOD1Q9Y239 953 aa11.46□□□□□ -0.57
TTC39A-213ENST00000524442 NRCAMQ92823 1304 aa11.45□□□□□ -0.58
TTC39A-213ENST00000524442 IGKV6D-21A0A0A0MT36 114 aa11.45□□□□□ -0.58
TTC39A-213ENST00000524442 PITPNM1O00562 1244 aa11.45□□□□□ -0.58
TTC39A-213ENST00000524442 GAS7O60861 476 aa11.45□□□□□ -0.58
TTC39A-213ENST00000524442 TDP2O95551 362 aa11.45□□□□□ -0.58
TTC39A-213ENST00000524442 CCNE2O96020 404 aa11.45□□□□□ -0.58
TTC39A-213ENST00000524442 HOXC8P31273 242 aa11.45□□□□□ -0.58
TTC39A-213ENST00000524442 SFNP31947 248 aa11.45□□□□□ -0.58
TTC39A-213ENST00000524442 STAT5BP51692 787 aa11.45□□□□□ -0.58
TTC39A-213ENST00000524442 BFSP2Q13515 415 aa11.45□□□□□ -0.58
TTC39A-213ENST00000524442 CUL4AQ13619 759 aa11.45□□□□□ -0.58
TTC39A-213ENST00000524442 FAM160B1Q5W0V3 765 aa11.45□□□□□ -0.58
TTC39A-213ENST00000524442 MFSD5Q6N075 450 aa11.45□□□□□ -0.58
TTC39A-213ENST00000524442 ABHD15Q6UXT9 468 aa11.45□□□□□ -0.58
TTC39A-213ENST00000524442 CHRDL2Q6WN34 429 aa11.45□□□□□ -0.58
TTC39A-213ENST00000524442 TMEM199Q8N511 208 aa11.45□□□□□ -0.58
TTC39A-213ENST00000524442 CCDC155Q8N6L0 562 aa11.45□□□□□ -0.58
TTC39A-213ENST00000524442 RDM1Q8NG50 284 aa11.45□□□□□ -0.58
TTC39A-213ENST00000524442 ETNPPLQ8TBG4 499 aa11.45□□□□□ -0.58
TTC39A-213ENST00000524442 CAGE1Q8TC20 777 aa11.45□□□□□ -0.58
TTC39A-213ENST00000524442 AFAP1L1Q8TED9 768 aa11.45□□□□□ -0.58
TTC39A-213ENST00000524442 BADQ92934 168 aa11.45□□□□□ -0.58
TTC39A-213ENST00000524442 NOC4LQ9BVI4 516 aaKnown RBP11.45□□□□□ -0.58
TTC39A-213ENST00000524442 SMC3Q9UQE7 1217 aa11.45□□□□□ -0.58
TTC39A-213ENST00000524442 PCDHA10Q9Y5I2 948 aa11.45□□□□□ -0.58
TTC39A-213ENST00000524442 DNAH12Q6ZR08 3092 aa11.45□□□□□ -0.58
TTC39A-213ENST00000524442 MYH7BA7E2Y1 1941 aa11.45□□□□□ -0.58
TTC39A-213ENST00000524442 C17orf102A2RUQ5 167 aa11.44□□□□□ -0.58
TTC39A-213ENST00000524442 WDR64B1ANS9 1081 aa11.44□□□□□ -0.58
TTC39A-213ENST00000524442 DDX39AO00148 427 aaKnown RBP11.44□□□□□ -0.58
TTC39A-213ENST00000524442 CCNT1O60563 726 aaKnown RBP11.44□□□□□ -0.58
TTC39A-213ENST00000524442 PSMD10O75832 226 aa11.44□□□□□ -0.58
TTC39A-213ENST00000524442 PSAPP07602 524 aa11.44□□□□□ -0.58
TTC39A-213ENST00000524442 SMIM10L2AP0DMW4 78 aa11.44□□□□□ -0.58
TTC39A-213ENST00000524442 SMIM10L2BP0DMW5 78 aa11.44□□□□□ -0.58
TTC39A-213ENST00000524442 ITGB8P26012 769 aa11.44□□□□□ -0.58
TTC39A-213ENST00000524442 GJB2P29033 226 aa11.44□□□□□ -0.58
TTC39A-213ENST00000524442 JAK3P52333 1124 aa11.44□□□□□ -0.58
TTC39A-213ENST00000524442 FOSBP53539 338 aa11.44□□□□□ -0.58
TTC39A-213ENST00000524442 MDM2Q00987 491 aaPredicted RBP11.44□□□□□ -0.58
TTC39A-213ENST00000524442 PTK7Q13308 1070 aa11.44□□□□□ -0.58
TTC39A-213ENST00000524442 ORC2Q13416 577 aaPredicted RBP11.44□□□□□ -0.58
TTC39A-213ENST00000524442 PPIGQ13427 754 aaKnown RBP eCLIP11.44□□□□□ -0.58
TTC39A-213ENST00000524442 GNL2Q13823 731 aaKnown RBP11.44□□□□□ -0.58
TTC39A-213ENST00000524442 EARS2Q5JPH6 523 aaKnown RBP11.44□□□□□ -0.58
TTC39A-213ENST00000524442 LRCH2Q5VUJ6 765 aa11.44□□□□□ -0.58
TTC39A-213ENST00000524442 GDF6Q6KF10 455 aaPredicted RBP11.44□□□□□ -0.58
TTC39A-213ENST00000524442 TRIM50Q86XT4 487 aa11.44□□□□□ -0.58
TTC39A-213ENST00000524442 SNX21Q969T3 373 aa11.44□□□□□ -0.58
TTC39A-213ENST00000524442 INTS4Q96HW7 963 aaKnown RBP11.44□□□□□ -0.58
TTC39A-213ENST00000524442 PCYT2Q99447 389 aa11.44□□□□□ -0.58
TTC39A-213ENST00000524442 TEKT3Q9BXF9 490 aa11.44□□□□□ -0.58
TTC39A-213ENST00000524442 UBE2OQ9C0C9 1292 aaKnown RBP11.44□□□□□ -0.58
TTC39A-213ENST00000524442 KCNMB3Q9NPA1 279 aa11.44□□□□□ -0.58
TTC39A-213ENST00000524442 COLQQ9Y215 455 aaPredicted RBP11.44□□□□□ -0.58
TTC39A-213ENST00000524442 TELO2Q9Y4R8 837 aa11.44□□□□□ -0.58
TTC39A-213ENST00000524442 RRN3P2A6NIE6 340 aa11.43□□□□□ -0.58
TTC39A-213ENST00000524442 BACH1O14867 736 aa11.43□□□□□ -0.58
TTC39A-213ENST00000524442 SLC37A4O43826 429 aa11.43□□□□□ -0.58
TTC39A-213ENST00000524442 BAG4O95429 457 aaKnown RBP11.43□□□□□ -0.58
TTC39A-213ENST00000524442 PARNO95453 639 aaKnown RBP11.43□□□□□ -0.58
TTC39A-213ENST00000524442 RPLP2P05387 115 aaKnown RBP11.43□□□□□ -0.58
TTC39A-213ENST00000524442 U2AF2P26368 475 aaKnown RBP eCLIP11.43□□□□□ -0.58
TTC39A-213ENST00000524442 TRAPPC10P48553 1259 aa11.43□□□□□ -0.58
TTC39A-213ENST00000524442 GUCY1B3Q02153 619 aa11.43□□□□□ -0.58
TTC39A-213ENST00000524442 FPGSQ05932 587 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms