RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 GRM8O00222 908 aa8.3□□□□□ -1.08
SDCBP-210ENST00000522843 EREGO14944 169 aa8.3□□□□□ -1.08
SDCBP-210ENST00000522843 ENTPD3O75355 529 aa8.3□□□□□ -1.08
SDCBP-210ENST00000522843 PDE8BO95263 885 aa8.3□□□□□ -1.08
SDCBP-210ENST00000522843 ABL1P00519 1130 aa8.3□□□□□ -1.08
SDCBP-210ENST00000522843 NFICP08651 508 aa8.3□□□□□ -1.08
SDCBP-210ENST00000522843 ZKSCAN1P17029 563 aaPredicted RBP8.3□□□□□ -1.08
SDCBP-210ENST00000522843 HMGCS2P54868 508 aa8.3□□□□□ -1.08
SDCBP-210ENST00000522843 SPP2Q13103 211 aa8.3□□□□□ -1.08
SDCBP-210ENST00000522843 ZNF211Q13398 564 aaPredicted RBP8.3□□□□□ -1.08
SDCBP-210ENST00000522843 AAMPQ13685 434 aa8.3□□□□□ -1.08
SDCBP-210ENST00000522843 RALBP1Q15311 655 aa8.3□□□□□ -1.08
SDCBP-210ENST00000522843 TWISTNBQ3B726 338 aaPredicted RBP8.3□□□□□ -1.08
SDCBP-210ENST00000522843 CAVIN4Q5BKX8 364 aa8.3□□□□□ -1.08
SDCBP-210ENST00000522843 DIEXFQ68CQ4 756 aaKnown RBP8.3□□□□□ -1.08
SDCBP-210ENST00000522843 ALKBH2Q6NS38 261 aa8.3□□□□□ -1.08
SDCBP-210ENST00000522843 TRPV1Q8NER1 839 aa8.3□□□□□ -1.08
SDCBP-210ENST00000522843 ATXN2LQ8WWM7 1075 aaKnown RBP8.3□□□□□ -1.08
SDCBP-210ENST00000522843 UHRF1Q96T88 793 aaPredicted RBP8.3□□□□□ -1.08
SDCBP-210ENST00000522843 P2RX7Q99572 595 aaKnown RBP8.3□□□□□ -1.08
SDCBP-210ENST00000522843 CHMP4AQ9BY43 222 aa8.3□□□□□ -1.08
SDCBP-210ENST00000522843 PORCNQ9H237 461 aa8.3□□□□□ -1.08
SDCBP-210ENST00000522843 PDLIM7Q9NR12 457 aa8.3□□□□□ -1.08
SDCBP-210ENST00000522843 RBPJLQ9UBG7 517 aa8.3□□□□□ -1.08
SDCBP-210ENST00000522843 ATP11BQ9Y2G3 1177 aa8.3□□□□□ -1.08
SDCBP-210ENST00000522843 LRRFIP2Q9Y608 721 aaKnown RBP8.3□□□□□ -1.08
SDCBP-210ENST00000522843 MUC6Q6W4X9 2439 aa8.3□□□□□ -1.08
SDCBP-210ENST00000522843 MYO9BQ13459 2157 aa8.29□□□□□ -1.08
SDCBP-210ENST00000522843 PAPLNO95428 1278 aa8.29□□□□□ -1.08
SDCBP-210ENST00000522843 IGHA2P01877 340 aa8.29□□□□□ -1.08
SDCBP-210ENST00000522843 ADH5P11766 374 aa8.29□□□□□ -1.08
SDCBP-210ENST00000522843 PDE3AQ14432 1141 aa8.29□□□□□ -1.08
SDCBP-210ENST00000522843 SNX17Q15036 470 aa8.29□□□□□ -1.08
SDCBP-210ENST00000522843 WDR43Q15061 677 aaKnown RBP eCLIP8.29□□□□□ -1.08
SDCBP-210ENST00000522843 TRIM60Q495X7 471 aa8.29□□□□□ -1.08
SDCBP-210ENST00000522843 KLHDC4Q8TBB5 520 aa8.29□□□□□ -1.08
SDCBP-210ENST00000522843 SOCS4Q8WXH5 440 aa8.29□□□□□ -1.08
SDCBP-210ENST00000522843 PPM1EQ8WY54 764 aa8.29□□□□□ -1.08
SDCBP-210ENST00000522843 ACTL7BQ9Y614 415 aa8.29□□□□□ -1.08
SDCBP-210ENST00000522843 TCF20Q9UGU0 1960 aaKnown RBP8.29□□□□□ -1.08
SDCBP-210ENST00000522843 CHD7Q9P2D1 2997 aa8.29□□□□□ -1.08
SDCBP-210ENST00000522843 MYH13Q9UKX3 1938 aa8.29□□□□□ -1.08
SDCBP-210ENST00000522843 ATAD5Q96QE3 1844 aa8.29□□□□□ -1.08
SDCBP-210ENST00000522843 GAKO14976 1311 aa8.29□□□□□ -1.08
SDCBP-210ENST00000522843 KIF16BQ96L93 1317 aa8.29□□□□□ -1.08
SDCBP-210ENST00000522843 DNM1LO00429 736 aa8.28□□□□□ -1.08
SDCBP-210ENST00000522843 BIN1O00499 593 aa8.28□□□□□ -1.08
SDCBP-210ENST00000522843 FZD6O60353 706 aa8.28□□□□□ -1.08
SDCBP-210ENST00000522843 PHACTR2O75167 634 aa8.28□□□□□ -1.08
SDCBP-210ENST00000522843 FAM13AO94988 1023 aa8.28□□□□□ -1.08
SDCBP-210ENST00000522843 CALD1Q05682 793 aaKnown RBP8.28□□□□□ -1.08
SDCBP-210ENST00000522843 METTL24Q5JXM2 366 aa8.28□□□□□ -1.08
SDCBP-210ENST00000522843 SLC39A5Q6ZMH5 540 aa8.28□□□□□ -1.08
SDCBP-210ENST00000522843 ZNF765Q7L2R6 523 aa8.28□□□□□ -1.08
SDCBP-210ENST00000522843 GPR142Q7Z601 462 aa8.28□□□□□ -1.08
SDCBP-210ENST00000522843 ANKRD44Q8N8A2 993 aa8.28□□□□□ -1.08
SDCBP-210ENST00000522843 WDR66Q8TBY9 1149 aa8.28□□□□□ -1.08
SDCBP-210ENST00000522843 LPAR1Q92633 364 aa8.28□□□□□ -1.08
SDCBP-210ENST00000522843 APBA2Q99767 749 aa8.28□□□□□ -1.08
SDCBP-210ENST00000522843 LRFN3Q9BTN0 628 aa8.28□□□□□ -1.08
SDCBP-210ENST00000522843 EPHX3Q9H6B9 360 aa8.28□□□□□ -1.08
SDCBP-210ENST00000522843 PRDM5Q9NQX1 630 aaPredicted RBP8.28□□□□□ -1.08
SDCBP-210ENST00000522843 THEGQ9P2T0 379 aa8.28□□□□□ -1.08
SDCBP-210ENST00000522843 DDX20Q9UHI6 824 aaKnown RBP8.28□□□□□ -1.08
SDCBP-210ENST00000522843 SLC5A6Q9Y289 635 aa8.28□□□□□ -1.08
SDCBP-210ENST00000522843 MYBBP1AQ9BQG0 1328 aaKnown RBP8.28□□□□□ -1.08
SDCBP-210ENST00000522843 MYH2Q9UKX2 1941 aa8.27□□□□□ -1.09
SDCBP-210ENST00000522843 TNFRSF21O75509 655 aa8.27□□□□□ -1.09
SDCBP-210ENST00000522843 NBPF7P0C2Y1 421 aaPredicted RBP8.27□□□□□ -1.09
SDCBP-210ENST00000522843 HOXA7P31268 230 aaPredicted RBP8.27□□□□□ -1.09
SDCBP-210ENST00000522843 RGS2P41220 211 aa8.27□□□□□ -1.09
SDCBP-210ENST00000522843 HERVK_113P62684 666 aa8.27□□□□□ -1.09
SDCBP-210ENST00000522843 SHROOM1Q2M3G4 852 aaPredicted RBP8.27□□□□□ -1.09
SDCBP-210ENST00000522843 RABL6Q3YEC7 729 aaPredicted RBP8.27□□□□□ -1.09
SDCBP-210ENST00000522843 GJC2Q5T442 439 aaPredicted RBP8.27□□□□□ -1.09
SDCBP-210ENST00000522843 ZNF648Q5T619 568 aaPredicted RBP8.27□□□□□ -1.09
SDCBP-210ENST00000522843 ZSCAN29Q8IWY8 852 aaPredicted RBP8.27□□□□□ -1.09
SDCBP-210ENST00000522843 GPRC5AQ8NFJ5 357 aa8.27□□□□□ -1.09
SDCBP-210ENST00000522843 BCL7CQ8WUZ0 217 aaPredicted RBP8.27□□□□□ -1.09
SDCBP-210ENST00000522843 RNPC3Q96LT9 517 aaKnown RBP8.27□□□□□ -1.09
SDCBP-210ENST00000522843 NRSN2Q9GZP1 204 aa8.27□□□□□ -1.09
SDCBP-210ENST00000522843 SEMA6CQ9H3T2 930 aa8.27□□□□□ -1.09
SDCBP-210ENST00000522843 ZNF576Q9H609 170 aa8.27□□□□□ -1.09
SDCBP-210ENST00000522843 MTMR7Q9Y216 660 aa8.27□□□□□ -1.09
SDCBP-210ENST00000522843 USTQ9Y2C2 406 aa8.27□□□□□ -1.09
SDCBP-210ENST00000522843 CACNA1FO60840 1977 aa8.27□□□□□ -1.09
SDCBP-210ENST00000522843 VAMP4O75379 141 aa8.26□□□□□ -1.09
SDCBP-210ENST00000522843 CNMDO75829 334 aa8.26□□□□□ -1.09
SDCBP-210ENST00000522843 RAB6AP20340 208 aa8.26□□□□□ -1.09
SDCBP-210ENST00000522843 MAPK4P31152 587 aa8.26□□□□□ -1.09
SDCBP-210ENST00000522843 RHBDL3P58872 404 aa8.26□□□□□ -1.09
SDCBP-210ENST00000522843 ERVK-24P63145 666 aa8.26□□□□□ -1.09
SDCBP-210ENST00000522843 MRPS5P82675 430 aaKnown RBP8.26□□□□□ -1.09
SDCBP-210ENST00000522843 PABPC4Q13310 644 aaKnown RBP eCLIP8.26□□□□□ -1.09
SDCBP-210ENST00000522843 PICALMQ13492 652 aa8.26□□□□□ -1.09
SDCBP-210ENST00000522843 PUM3Q15397 648 aaKnown RBP8.26□□□□□ -1.09
SDCBP-210ENST00000522843 AKNAD1Q5T1N1 836 aa8.26□□□□□ -1.09
SDCBP-210ENST00000522843 PLEKHH3Q7Z736 793 aa8.26□□□□□ -1.09
SDCBP-210ENST00000522843 NPLOC4Q8TAT6 608 aa8.26□□□□□ -1.09
SDCBP-210ENST00000522843 ZNF384Q8TF68 577 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms