RNA–Protein interactions for RNA: ENST00000521865.5

PABPC1-218, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-218ENST00000521865 LIFRP42702 1097 aa23.94■■□□□ 1.42
PABPC1-218ENST00000521865 HTRA4P83105 476 aaPredicted RBP23.94■■□□□ 1.42
PABPC1-218ENST00000521865 UBE2SQ16763 222 aa23.94■■□□□ 1.42
PABPC1-218ENST00000521865 CREB3L3Q68CJ9 461 aa23.94■■□□□ 1.42
PABPC1-218ENST00000521865 ESYT1Q9BSJ8 1104 aa23.94■■□□□ 1.42
PABPC1-218ENST00000521865 LRRC2Q9BYS8 371 aa23.94■■□□□ 1.42
PABPC1-218ENST00000521865 REV3LO60673 3130 aa23.94■■□□□ 1.42
PABPC1-218ENST00000521865 PTPRSQ13332 1948 aa23.94■■□□□ 1.42
PABPC1-218ENST00000521865 MARK3P27448 753 aa23.93■■□□□ 1.42
PABPC1-218ENST00000521865 MKRN4PQ13434 485 aaPredicted RBP23.93■■□□□ 1.42
PABPC1-218ENST00000521865 MTMR1Q13613 665 aa23.93■■□□□ 1.42
PABPC1-218ENST00000521865 SYNE3Q6ZMZ3 975 aa23.93■■□□□ 1.42
PABPC1-218ENST00000521865 HEATR3Q7Z4Q2 680 aa23.93■■□□□ 1.42
PABPC1-218ENST00000521865 MICU3Q86XE3 530 aa23.93■■□□□ 1.42
PABPC1-218ENST00000521865 SEPT1Q8WYJ6 367 aa23.93■■□□□ 1.42
PABPC1-218ENST00000521865 APBB2Q92870 758 aa23.93■■□□□ 1.42
PABPC1-218ENST00000521865 GLG1Q92896 1179 aa23.93■■□□□ 1.42
PABPC1-218ENST00000521865 TOP1MTQ969P6 601 aa23.93■■□□□ 1.42
PABPC1-218ENST00000521865 IFIH1Q9BYX4 1025 aaKnown RBP23.93■■□□□ 1.42
PABPC1-218ENST00000521865 OSBPL7Q9BZF2 842 aa23.93■■□□□ 1.42
PABPC1-218ENST00000521865 ATP9AO75110 1047 aa23.92■■□□□ 1.42
PABPC1-218ENST00000521865 PPFIA1Q13136 1202 aa23.92■■□□□ 1.42
PABPC1-218ENST00000521865 FANCBQ8NB91 859 aa23.92■■□□□ 1.42
PABPC1-218ENST00000521865 SP7Q8TDD2 431 aaPredicted RBP23.92■■□□□ 1.42
PABPC1-218ENST00000521865 SAMD11Q96NU1 681 aa23.92■■□□□ 1.42
PABPC1-218ENST00000521865 COL4A4P53420 1690 aaPredicted RBP23.92■■□□□ 1.42
PABPC1-218ENST00000521865 KCNA2P16389 499 aa23.91■■□□□ 1.42
PABPC1-218ENST00000521865 ITGB5P18084 799 aa23.91■■□□□ 1.42
PABPC1-218ENST00000521865 ADAM17P78536 824 aa23.91■■□□□ 1.42
PABPC1-218ENST00000521865 COL9A3Q14050 684 aaPredicted RBP23.91■■□□□ 1.42
PABPC1-218ENST00000521865 PTPROQ16827 1216 aa23.91■■□□□ 1.42
PABPC1-218ENST00000521865 TMTC3Q6ZXV5 915 aa23.91■■□□□ 1.42
PABPC1-218ENST00000521865 RSPH3Q86UC2 560 aa23.91■■□□□ 1.42
PABPC1-218ENST00000521865 C1QTNF1Q9BXJ1 281 aa23.91■■□□□ 1.42
PABPC1-218ENST00000521865 UBE2ZQ9H832 354 aaPredicted RBP23.91■■□□□ 1.42
PABPC1-218ENST00000521865 EHMT1Q9H9B1 1298 aa23.91■■□□□ 1.42
PABPC1-218ENST00000521865 ERAP1Q9NZ08 941 aa23.91■■□□□ 1.42
PABPC1-218ENST00000521865 PCDHA6Q9UN73 950 aa23.91■■□□□ 1.42
PABPC1-218ENST00000521865 PCDHA8Q9Y5H6 950 aa23.91■■□□□ 1.42
PABPC1-218ENST00000521865 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.9■■□□□ 1.42
PABPC1-218ENST00000521865 EPC2Q52LR7 807 aa23.9■■□□□ 1.42
PABPC1-218ENST00000521865 TAF2Q6P1X5 1199 aa23.9■■□□□ 1.42
PABPC1-218ENST00000521865 RUFY4Q6ZNE9 571 aa23.9■■□□□ 1.42
PABPC1-218ENST00000521865 RAPGEFL1Q9UHV5 662 aa23.9■■□□□ 1.42
PABPC1-218ENST00000521865 TCF20Q9UGU0 1960 aaKnown RBP23.9■■□□□ 1.42
PABPC1-218ENST00000521865 GSTTP1A0A1W2PQM5 241 aa23.89■■□□□ 1.41
PABPC1-218ENST00000521865 GHRP10912 638 aa23.89■■□□□ 1.41
PABPC1-218ENST00000521865 NECTIN1Q15223 517 aa23.89■■□□□ 1.41
PABPC1-218ENST00000521865 GRIK4Q16099 956 aa23.89■■□□□ 1.41
PABPC1-218ENST00000521865 FAM26DQ5JW98 314 aa23.89■■□□□ 1.41
PABPC1-218ENST00000521865 RNF20Q5VTR2 975 aa23.89■■□□□ 1.41
PABPC1-218ENST00000521865 MRPL38Q96DV4 380 aaKnown RBP23.89■■□□□ 1.41
PABPC1-218ENST00000521865 JADE2Q9NQC1 790 aa23.89■■□□□ 1.41
PABPC1-218ENST00000521865 TUBE1Q9UJT0 475 aa23.89■■□□□ 1.41
PABPC1-218ENST00000521865 UBIAD1Q9Y5Z9 338 aa23.89■■□□□ 1.41
PABPC1-218ENST00000521865 CHRNA1P02708 482 aa23.88■■□□□ 1.41
PABPC1-218ENST00000521865 KCNA5P22460 613 aa23.88■■□□□ 1.41
PABPC1-218ENST00000521865 IGBP1P78318 339 aa23.88■■□□□ 1.41
PABPC1-218ENST00000521865 GPM6BQ13491 265 aa23.88■■□□□ 1.41
PABPC1-218ENST00000521865 SMARCAD1Q9H4L7 1026 aa23.88■■□□□ 1.41
PABPC1-218ENST00000521865 MAFGO15525 162 aa23.87■■□□□ 1.41
PABPC1-218ENST00000521865 TMEM192Q8IY95 271 aa23.87■■□□□ 1.41
PABPC1-218ENST00000521865 DNAJB3Q8WWF6 145 aa23.87■■□□□ 1.41
PABPC1-218ENST00000521865 IL17RAQ96F46 866 aa23.87■■□□□ 1.41
PABPC1-218ENST00000521865 AZI2Q9H6S1 392 aa23.87■■□□□ 1.41
PABPC1-218ENST00000521865 BDP1A6H8Y1 2624 aa23.86■■□□□ 1.41
PABPC1-218ENST00000521865 NAPAP54920 295 aa23.86■■□□□ 1.41
PABPC1-218ENST00000521865 TIGD5Q53EQ6 642 aa23.86■■□□□ 1.41
PABPC1-218ENST00000521865 SGMS1Q86VZ5 419 aa23.86■■□□□ 1.41
PABPC1-218ENST00000521865 FIBCD1Q8N539 461 aa23.86■■□□□ 1.41
PABPC1-218ENST00000521865 JPH1Q9HDC5 661 aaPredicted RBP23.86■■□□□ 1.41
PABPC1-218ENST00000521865 RBM28Q9NW13 759 aaKnown RBP23.86■■□□□ 1.41
PABPC1-218ENST00000521865 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.85■■□□□ 1.41
PABPC1-218ENST00000521865 H3BNC9 293 aa23.85■■□□□ 1.41
PABPC1-218ENST00000521865 WWC2Q6AWC2 1192 aa23.85■■□□□ 1.41
PABPC1-218ENST00000521865 EP400NLQ6ZTU2 488 aa23.85■■□□□ 1.41
PABPC1-218ENST00000521865 RPAINQ86UA6 219 aa23.85■■□□□ 1.41
PABPC1-218ENST00000521865 BANK1Q8NDB2 785 aa23.85■■□□□ 1.41
PABPC1-218ENST00000521865 NEK1Q96PY6 1258 aa23.85■■□□□ 1.41
PABPC1-218ENST00000521865 FAM49AQ9H0Q0 323 aaPredicted RBP23.85■■□□□ 1.41
PABPC1-218ENST00000521865 EPHX3Q9H6B9 360 aa23.85■■□□□ 1.41
PABPC1-218ENST00000521865 SLC9A2Q9UBY0 812 aa23.85■■□□□ 1.41
PABPC1-218ENST00000521865 TRPC6Q9Y210 931 aa23.85■■□□□ 1.41
PABPC1-218ENST00000521865 CTNNB1P35222 781 aa23.84■■□□□ 1.41
PABPC1-218ENST00000521865 LPIN1Q14693 890 aa23.84■■□□□ 1.41
PABPC1-218ENST00000521865 APOA5Q6Q788 366 aa23.84■■□□□ 1.41
PABPC1-218ENST00000521865 PGBD1Q96JS3 809 aa23.84■■□□□ 1.41
PABPC1-218ENST00000521865 SDF4Q9BRK5 362 aa23.84■■□□□ 1.41
PABPC1-218ENST00000521865 KCNH7Q9NS40 1196 aa23.84■■□□□ 1.41
PABPC1-218ENST00000521865 CDY2AQ9Y6F7 541 aa23.84■■□□□ 1.41
PABPC1-218ENST00000521865 NCOR1O75376 2440 aa23.84■■□□□ 1.41
PABPC1-218ENST00000521865 RRN3P2A6NIE6 340 aa23.83■■□□□ 1.41
PABPC1-218ENST00000521865 INSRRP14616 1297 aa23.83■■□□□ 1.41
PABPC1-218ENST00000521865 MGAT3Q09327 533 aa23.83■■□□□ 1.41
PABPC1-218ENST00000521865 RTN1Q16799 776 aa23.83■■□□□ 1.41
PABPC1-218ENST00000521865 LEXMQ3ZCV2 418 aa23.83■■□□□ 1.41
PABPC1-218ENST00000521865 TNPO1Q92973 898 aaKnown RBP23.83■■□□□ 1.41
PABPC1-218ENST00000521865 TCEANC2Q96MN5 208 aa23.83■■□□□ 1.41
PABPC1-218ENST00000521865 MXRA8Q9BRK3 442 aa23.83■■□□□ 1.41
PABPC1-218ENST00000521865 CNTNAP5Q8WYK1 1306 aa23.83■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms