RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 ACRP10323 421 aa23.48■■□□□ 1.35
TRIM35-203ENST00000521253 XBP1P17861 261 aa23.48■■□□□ 1.35
TRIM35-203ENST00000521253 ZNF200P98182 395 aaPredicted RBP23.48■■□□□ 1.35
TRIM35-203ENST00000521253 TBCKQ8TEA7 893 aa23.48■■□□□ 1.35
TRIM35-203ENST00000521253 SCLYQ96I15 445 aa23.48■■□□□ 1.35
TRIM35-203ENST00000521253 UPF2Q9HAU5 1272 aaKnown RBP23.48■■□□□ 1.35
TRIM35-203ENST00000521253 PITPNM1O00562 1244 aa23.47■■□□□ 1.35
TRIM35-203ENST00000521253 USP11P51784 963 aa23.47■■□□□ 1.35
TRIM35-203ENST00000521253 SETQ01105 290 aaPredicted RBP23.47■■□□□ 1.35
TRIM35-203ENST00000521253 BFSP2Q13515 415 aa23.47■■□□□ 1.35
TRIM35-203ENST00000521253 PRR16Q569H4 304 aa23.47■■□□□ 1.35
TRIM35-203ENST00000521253 DHX38Q92620 1227 aaKnown RBP23.47■■□□□ 1.35
TRIM35-203ENST00000521253 LENG9Q96B70 501 aa23.47■■□□□ 1.35
TRIM35-203ENST00000521253 LRCH3Q96II8 777 aa23.47■■□□□ 1.35
TRIM35-203ENST00000521253 UIMC1Q96RL1 719 aa23.47■■□□□ 1.35
TRIM35-203ENST00000521253 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.47■■□□□ 1.355e-8■■■■□ 21.4
TRIM35-203ENST00000521253 IL23AQ9NPF7 189 aa23.47■■□□□ 1.35
TRIM35-203ENST00000521253 IPO5O00410 1097 aaKnown RBP23.46■■□□□ 1.35
TRIM35-203ENST00000521253 DHX15O43143 795 aaKnown RBP23.46■■□□□ 1.35
TRIM35-203ENST00000521253 HOXC8P31273 242 aa23.46■■□□□ 1.35
TRIM35-203ENST00000521253 ACTR2P61160 394 aa23.46■■□□□ 1.35
TRIM35-203ENST00000521253 RABEP1Q15276 862 aa23.46■■□□□ 1.35
TRIM35-203ENST00000521253 TMEM240Q5SV17 173 aa23.46■■□□□ 1.35
TRIM35-203ENST00000521253 ZNF577Q9BSK1 485 aa23.46■■□□□ 1.35
TRIM35-203ENST00000521253 GTF3C3Q9Y5Q9 886 aa23.46■■□□□ 1.35
TRIM35-203ENST00000521253 C17orf102A2RUQ5 167 aa23.45■■□□□ 1.34
TRIM35-203ENST00000521253 DDX39AO00148 427 aaKnown RBP23.45■■□□□ 1.34
TRIM35-203ENST00000521253 CCNE2O96020 404 aa23.45■■□□□ 1.34
TRIM35-203ENST00000521253 KRT25Q7Z3Z0 450 aa23.45■■□□□ 1.34
TRIM35-203ENST00000521253 CCDC83Q8IWF9 413 aa23.45■■□□□ 1.34
TRIM35-203ENST00000521253 RETREG2Q8NC44 543 aa23.45■■□□□ 1.34
TRIM35-203ENST00000521253 CAGE1Q8TC20 777 aa23.45■■□□□ 1.34
TRIM35-203ENST00000521253 GLG1Q92896 1179 aa23.45■■□□□ 1.34
TRIM35-203ENST00000521253 VWCEQ96DN2 955 aa23.45■■□□□ 1.34
TRIM35-203ENST00000521253 RNPC3Q96LT9 517 aaKnown RBP23.45■■□□□ 1.34
TRIM35-203ENST00000521253 PCYT2Q99447 389 aa23.45■■□□□ 1.34
TRIM35-203ENST00000521253 RNPEPQ9H4A4 650 aa23.45■■□□□ 1.34
TRIM35-203ENST00000521253 EMSYQ7Z589 1322 aa23.44■■□□□ 1.34
TRIM35-203ENST00000521253 LGR5O75473 907 aa23.44■■□□□ 1.34
TRIM35-203ENST00000521253 IQCF3P0C7M6 154 aa23.44■■□□□ 1.34
TRIM35-203ENST00000521253 MARK3P27448 753 aa23.44■■□□□ 1.34
TRIM35-203ENST00000521253 PTK7Q13308 1070 aa23.44■■□□□ 1.34
TRIM35-203ENST00000521253 NONOQ15233 471 aaKnown RBP eCLIP23.44■■□□□ 1.34
TRIM35-203ENST00000521253 PSRC1Q6PGN9 363 aaPredicted RBP23.44■■□□□ 1.34
TRIM35-203ENST00000521253 ZNF365Q70YC5 407 aa23.44■■□□□ 1.34
TRIM35-203ENST00000521253 CCDC155Q8N6L0 562 aa23.44■■□□□ 1.34
TRIM35-203ENST00000521253 OXER1Q8TDS5 423 aa23.44■■□□□ 1.34
TRIM35-203ENST00000521253 ATP6V0A1Q93050 837 aa23.44■■□□□ 1.34
TRIM35-203ENST00000521253 WNT8BQ93098 351 aa23.44■■□□□ 1.34
TRIM35-203ENST00000521253 ZSCAN31Q96LW9 406 aaPredicted RBP23.44■■□□□ 1.34
TRIM35-203ENST00000521253 SMARCAD1Q9H4L7 1026 aa23.44■■□□□ 1.34
TRIM35-203ENST00000521253 SETD4Q9NVD3 440 aa23.44■■□□□ 1.34
TRIM35-203ENST00000521253 ERAP1Q9NZ08 941 aa23.44■■□□□ 1.34
TRIM35-203ENST00000521253 RBL2Q08999 1139 aa23.43■■□□□ 1.34
TRIM35-203ENST00000521253 TRIM71Q2Q1W2 868 aaKnown RBP23.43■■□□□ 1.34
TRIM35-203ENST00000521253 SERINC5Q86VE9 423 aa23.43■■□□□ 1.34
TRIM35-203ENST00000521253 TBC1D32Q96NH3 1257 aa23.43■■□□□ 1.34
TRIM35-203ENST00000521253 TBC1D22BQ9NU19 505 aa23.43■■□□□ 1.34
TRIM35-203ENST00000521253 MSH4O15457 936 aa23.42■■□□□ 1.34
TRIM35-203ENST00000521253 ATG7O95352 703 aa23.42■■□□□ 1.34
TRIM35-203ENST00000521253 TDP2O95551 362 aa23.42■■□□□ 1.34
TRIM35-203ENST00000521253 INF2Q27J81 1249 aa23.42■■□□□ 1.34
TRIM35-203ENST00000521253 AFAP1L1Q8TED9 768 aa23.42■■□□□ 1.34
TRIM35-203ENST00000521253 AZI2Q9H6S1 392 aa23.42■■□□□ 1.34
TRIM35-203ENST00000521253 SH2B1Q9NRF2 756 aaPredicted RBP23.42■■□□□ 1.34
TRIM35-203ENST00000521253 CYP3A7-CYP3A51PA0A087WV96 503 aa23.41■■□□□ 1.34
TRIM35-203ENST00000521253 CCDC194A0A1B0GVG4 234 aa23.41■■□□□ 1.34
TRIM35-203ENST00000521253 TREHO43280 583 aa23.41■■□□□ 1.34
TRIM35-203ENST00000521253 GNAT1P11488 350 aa23.41■■□□□ 1.34
TRIM35-203ENST00000521253 CKBP12277 381 aa23.41■■□□□ 1.34
TRIM35-203ENST00000521253 SELPP16109 830 aa23.41■■□□□ 1.34
TRIM35-203ENST00000521253 CYP3A7P24462 503 aa23.41■■□□□ 1.34
TRIM35-203ENST00000521253 FOSBP53539 338 aa23.41■■□□□ 1.34
TRIM35-203ENST00000521253 Q4G0T1 1027 aa23.41■■□□□ 1.34
TRIM35-203ENST00000521253 ABHD15Q6UXT9 468 aa23.41■■□□□ 1.34
TRIM35-203ENST00000521253 DEFB128Q7Z7B8 93 aa23.41■■□□□ 1.34
TRIM35-203ENST00000521253 RPUSD2Q8IZ73 545 aaKnown RBP23.41■■□□□ 1.34
TRIM35-203ENST00000521253 LMBR1Q8WVP7 490 aa23.41■■□□□ 1.34
TRIM35-203ENST00000521253 LLPHQ9BRT6 129 aaKnown RBP23.41■■□□□ 1.34
TRIM35-203ENST00000521253 NRCAMQ92823 1304 aa23.4■■□□□ 1.34
TRIM35-203ENST00000521253 IGKV6D-21A0A0A0MT36 114 aa23.4■■□□□ 1.34
TRIM35-203ENST00000521253 ST18O60284 1047 aa23.4■■□□□ 1.34
TRIM35-203ENST00000521253 FGBP02675 491 aa23.4■■□□□ 1.34
TRIM35-203ENST00000521253 RFC2P35250 354 aa23.4■■□□□ 1.34
TRIM35-203ENST00000521253 KRT2P35908 639 aa23.4■■□□□ 1.34
TRIM35-203ENST00000521253 STAT5BP51692 787 aa23.4■■□□□ 1.34
TRIM35-203ENST00000521253 ADAM17P78536 824 aa23.4■■□□□ 1.34
TRIM35-203ENST00000521253 PPFIA1Q13136 1202 aa23.4■■□□□ 1.34
TRIM35-203ENST00000521253 RASIP1Q5U651 963 aa23.4■■□□□ 1.34
TRIM35-203ENST00000521253 PIK3AP1Q6ZUJ8 805 aa23.4■■□□□ 1.34
TRIM35-203ENST00000521253 LRRC8DQ7L1W4 858 aa23.4■■□□□ 1.34
TRIM35-203ENST00000521253 PLPPR4Q7Z2D5 763 aa23.4■■□□□ 1.34
TRIM35-203ENST00000521253 PFKMP08237 780 aa23.39■■□□□ 1.33
TRIM35-203ENST00000521253 NR5A1Q13285 461 aa23.39■■□□□ 1.33
TRIM35-203ENST00000521253 EARS2Q5JPH6 523 aaKnown RBP23.39■■□□□ 1.33
TRIM35-203ENST00000521253 ZNF746Q6NUN9 644 aaPredicted RBP23.39■■□□□ 1.33
TRIM35-203ENST00000521253 TRAF7Q6Q0C0 670 aa23.39■■□□□ 1.33
TRIM35-203ENST00000521253 MOXD1Q6UVY6 613 aa23.39■■□□□ 1.33
TRIM35-203ENST00000521253 OTOP2Q7RTS6 562 aa23.39■■□□□ 1.33
TRIM35-203ENST00000521253 HERVK_113Q902F9 699 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms