RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 CEP55Q53EZ4 464 aa19.48■□□□□ 0.71
SQLE-205ENST00000521232 ZNF618Q5T7W0 954 aa19.48■□□□□ 0.71
SQLE-205ENST00000521232 MCTP2Q6DN12 878 aa19.48■□□□□ 0.71
SQLE-205ENST00000521232 TRIM50Q86XT4 487 aa19.48■□□□□ 0.71
SQLE-205ENST00000521232 SLC17A8Q8NDX2 589 aa19.48■□□□□ 0.71
SQLE-205ENST00000521232 PHOSPHO2Q8TCD6 241 aa19.48■□□□□ 0.71
SQLE-205ENST00000521232 CCDC12Q8WUD4 166 aaPredicted RBP19.48■□□□□ 0.71
SQLE-205ENST00000521232 MYLIPQ8WY64 445 aa19.48■□□□□ 0.71
SQLE-205ENST00000521232 ZNF274Q96GC6 653 aaPredicted RBP19.48■□□□□ 0.71
SQLE-205ENST00000521232 TREHO43280 583 aa19.47■□□□□ 0.71
SQLE-205ENST00000521232 NBNO60934 754 aa19.47■□□□□ 0.71
SQLE-205ENST00000521232 BAIAP3O94812 1187 aa19.47■□□□□ 0.71
SQLE-205ENST00000521232 GNAT1P11488 350 aa19.47■□□□□ 0.71
SQLE-205ENST00000521232 CCT2P78371 535 aaKnown RBP19.47■□□□□ 0.71
SQLE-205ENST00000521232 ADAM17P78536 824 aa19.47■□□□□ 0.71
SQLE-205ENST00000521232 AKAP17AQ02040 695 aaKnown RBP19.47■□□□□ 0.71
SQLE-205ENST00000521232 JAKMIP3Q5VZ66 844 aa19.47■□□□□ 0.71
SQLE-205ENST00000521232 CRYGNQ8WXF5 182 aa19.47■□□□□ 0.71
SQLE-205ENST00000521232 C6orf50Q9HD87 102 aa19.47■□□□□ 0.71
SQLE-205ENST00000521232 SETD4Q9NVD3 440 aa19.47■□□□□ 0.71
SQLE-205ENST00000521232 PKD2L1Q9P0L9 805 aa19.47■□□□□ 0.71
SQLE-205ENST00000521232 YBX2Q9Y2T7 364 aaKnown RBP19.47■□□□□ 0.71
SQLE-205ENST00000521232 PCDHA11Q9Y5I1 949 aa19.47■□□□□ 0.71
SQLE-205ENST00000521232 NFASCO94856 1347 aa19.47■□□□□ 0.71
SQLE-205ENST00000521232 ADAMTS3O15072 1205 aa19.46■□□□□ 0.71
SQLE-205ENST00000521232 CYP3A4P08684 503 aa19.46■□□□□ 0.71
SQLE-205ENST00000521232 ARP10275 920 aa19.46■□□□□ 0.71
SQLE-205ENST00000521232 GNA11P29992 359 aa19.46■□□□□ 0.71
SQLE-205ENST00000521232 RABGGTBP53611 331 aa19.46■□□□□ 0.71
SQLE-205ENST00000521232 ARHGAP4P98171 946 aa19.46■□□□□ 0.71
SQLE-205ENST00000521232 CNKSR3Q6P9H4 555 aa19.46■□□□□ 0.71
SQLE-205ENST00000521232 NIPA1Q7RTP0 329 aa19.46■□□□□ 0.71
SQLE-205ENST00000521232 SLC9A7Q96T83 725 aa19.46■□□□□ 0.71
SQLE-205ENST00000521232 SLC26A6Q9BXS9 759 aa19.46■□□□□ 0.71
SQLE-205ENST00000521232 UPF3BQ9BZI7 483 aaKnown RBP19.46■□□□□ 0.71
SQLE-205ENST00000521232 NKX2-4Q9H2Z4 354 aa19.46■□□□□ 0.71
SQLE-205ENST00000521232 NCOA5Q9HCD5 579 aaKnown RBP19.46■□□□□ 0.71
SQLE-205ENST00000521232 JPH1Q9HDC5 661 aaPredicted RBP19.46■□□□□ 0.71
SQLE-205ENST00000521232 NRCAMQ92823 1304 aa19.46■□□□□ 0.71
SQLE-205ENST00000521232 THPOP40225 353 aa19.45■□□□□ 0.7
SQLE-205ENST00000521232 MBTPS1Q14703 1052 aa19.45■□□□□ 0.7
SQLE-205ENST00000521232 SMARCAD1Q9H4L7 1026 aa19.45■□□□□ 0.7
SQLE-205ENST00000521232 SLC28A3Q9HAS3 691 aa19.45■□□□□ 0.7
SQLE-205ENST00000521232 AGO4Q9HCK5 861 aaKnown RBP19.45■□□□□ 0.7
SQLE-205ENST00000521232 PDRG1Q9NUG6 133 aa19.45■□□□□ 0.7
SQLE-205ENST00000521232 ERAP1Q9NZ08 941 aa19.45■□□□□ 0.7
SQLE-205ENST00000521232 SLC9A2Q9UBY0 812 aa19.45■□□□□ 0.7
SQLE-205ENST00000521232 RSPH10B2B2RC85 870 aa19.44■□□□□ 0.7
SQLE-205ENST00000521232 CAND2O75155 1236 aa19.44■□□□□ 0.7
SQLE-205ENST00000521232 LGR5O75473 907 aa19.44■□□□□ 0.7
SQLE-205ENST00000521232 RSPH10BP0C881 870 aa19.44■□□□□ 0.7
SQLE-205ENST00000521232 FOSL2P15408 326 aa19.44■□□□□ 0.7
SQLE-205ENST00000521232 ZNF76P36508 570 aa19.44■□□□□ 0.7
SQLE-205ENST00000521232 ITGB3BPQ13352 177 aaPredicted RBP19.44■□□□□ 0.7
SQLE-205ENST00000521232 REXO1Q8N1G1 1221 aaKnown RBP19.44■□□□□ 0.7
SQLE-205ENST00000521232 LMBR1Q8WVP7 490 aa19.44■□□□□ 0.7
SQLE-205ENST00000521232 SDF4Q9BRK5 362 aa19.44■□□□□ 0.7
SQLE-205ENST00000521232 SH3GLB2Q9NR46 395 aa19.44■□□□□ 0.7
SQLE-205ENST00000521232 EMSYQ7Z589 1322 aa19.44■□□□□ 0.7
SQLE-205ENST00000521232 ABHD14A-ACY1A0A1B0GW23 586 aa19.43■□□□□ 0.7
SQLE-205ENST00000521232 FAM86B1E9PN63 330 aa19.43■□□□□ 0.7
SQLE-205ENST00000521232 PPFIA3O75145 1194 aa19.43■□□□□ 0.7
SQLE-205ENST00000521232 ATG7O95352 703 aa19.43■□□□□ 0.7
SQLE-205ENST00000521232 FAM86B2P0C5J1 330 aa19.43■□□□□ 0.7
SQLE-205ENST00000521232 MYOGP15173 224 aa19.43■□□□□ 0.7
SQLE-205ENST00000521232 ANAPC15P60006 121 aa19.43■□□□□ 0.7
SQLE-205ENST00000521232 TCTN1Q2MV58 587 aa19.43■□□□□ 0.7
SQLE-205ENST00000521232 CCDC148Q8NFR7 591 aa19.43■□□□□ 0.7
SQLE-205ENST00000521232 BICD2Q8TD16 824 aa19.43■□□□□ 0.7
SQLE-205ENST00000521232 GLG1Q92896 1179 aa19.43■□□□□ 0.7
SQLE-205ENST00000521232 PCYT2Q99447 389 aa19.43■□□□□ 0.7
SQLE-205ENST00000521232 LARP6Q9BRS8 491 aaKnown RBP19.43■□□□□ 0.7
SQLE-205ENST00000521232 TRANK1O15050 2925 aa19.43■□□□□ 0.7
SQLE-205ENST00000521232 IGLV3-22A0A075B6J6 115 aa19.42■□□□□ 0.7
SQLE-205ENST00000521232 KCNJ6P48051 423 aa19.42■□□□□ 0.7
SQLE-205ENST00000521232 ACTR2P61160 394 aa19.42■□□□□ 0.7
SQLE-205ENST00000521232 WDR5P61964 334 aaKnown RBP19.42■□□□□ 0.7
SQLE-205ENST00000521232 SSRP1Q08945 709 aaKnown RBP19.42■□□□□ 0.7
SQLE-205ENST00000521232 RPAINQ86UA6 219 aa19.42■□□□□ 0.7
SQLE-205ENST00000521232 HERC6Q8IVU3 1022 aa19.42■□□□□ 0.7
SQLE-205ENST00000521232 TRIM22Q8IYM9 498 aa19.42■□□□□ 0.7
SQLE-205ENST00000521232 MAFAQ8NHW3 353 aaPredicted RBP19.42■□□□□ 0.7
SQLE-205ENST00000521232 VPS54Q9P1Q0 977 aa19.42■□□□□ 0.7
SQLE-205ENST00000521232 DHX15O43143 795 aaKnown RBP19.41■□□□□ 0.7
SQLE-205ENST00000521232 EFCAB14O75071 495 aa19.41■□□□□ 0.7
SQLE-205ENST00000521232 PPFIA1Q13136 1202 aa19.41■□□□□ 0.7
SQLE-205ENST00000521232 IKBKEQ14164 716 aa19.41■□□□□ 0.7
SQLE-205ENST00000521232 FAM26DQ5JW98 314 aa19.41■□□□□ 0.7
SQLE-205ENST00000521232 PLPPR4Q7Z2D5 763 aa19.41■□□□□ 0.7
SQLE-205ENST00000521232 PLA2G4DQ86XP0 818 aa19.41■□□□□ 0.7
SQLE-205ENST00000521232 PRDM12Q9H4Q4 367 aa19.41■□□□□ 0.7
SQLE-205ENST00000521232 AZI2Q9H6S1 392 aa19.41■□□□□ 0.7
SQLE-205ENST00000521232 PTPRSQ13332 1948 aa19.41■□□□□ 0.7
SQLE-205ENST00000521232 IGKV6D-21A0A0A0MT36 114 aa19.4■□□□□ 0.7
SQLE-205ENST00000521232 MBLAC1A4D2B0 266 aaPredicted RBP19.4■□□□□ 0.7
SQLE-205ENST00000521232 KIF28PB7ZC32 967 aa19.4■□□□□ 0.7
SQLE-205ENST00000521232 CPLX1O14810 134 aa19.4■□□□□ 0.7
SQLE-205ENST00000521232 DEXIO95424 95 aa19.4■□□□□ 0.7
SQLE-205ENST00000521232 MARK3P27448 753 aa19.4■□□□□ 0.7
SQLE-205ENST00000521232 CIITAP33076 1130 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms