RNA–Protein interactions for RNA: ENST00000521067.1

PABPC1-217, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-217ENST00000521067 COL9A1P20849 921 aa23.33■■□□□ 1.33
PABPC1-217ENST00000521067 ARHGAP4P98171 946 aa23.33■■□□□ 1.33
PABPC1-217ENST00000521067 UBE2SQ16763 222 aa23.33■■□□□ 1.33
PABPC1-217ENST00000521067 NLRX1Q86UT6 975 aa23.33■■□□□ 1.33
PABPC1-217ENST00000521067 SKAP1Q86WV1 359 aa23.33■■□□□ 1.33
PABPC1-217ENST00000521067 SP7Q8TDD2 431 aaPredicted RBP23.33■■□□□ 1.33
PABPC1-217ENST00000521067 SEPT8Q92599 483 aa23.33■■□□□ 1.33
PABPC1-217ENST00000521067 TOP1MTQ969P6 601 aa23.33■■□□□ 1.33
PABPC1-217ENST00000521067 DOCK5Q9H7D0 1870 aa23.32■■□□□ 1.32
PABPC1-217ENST00000521067 CAND2O75155 1236 aa23.32■■□□□ 1.32
PABPC1-217ENST00000521067 GNAT1P11488 350 aa23.32■■□□□ 1.32
PABPC1-217ENST00000521067 FAM26DQ5JW98 314 aa23.32■■□□□ 1.32
PABPC1-217ENST00000521067 RUFY4Q6ZNE9 571 aa23.32■■□□□ 1.32
PABPC1-217ENST00000521067 FANCBQ8NB91 859 aa23.32■■□□□ 1.32
PABPC1-217ENST00000521067 UBIAD1Q9Y5Z9 338 aa23.32■■□□□ 1.32
PABPC1-217ENST00000521067 CHRNA1P02708 482 aa23.31■■□□□ 1.32
PABPC1-217ENST00000521067 TCF7P36402 384 aaPredicted RBP23.31■■□□□ 1.32
PABPC1-217ENST00000521067 TMTC3Q6ZXV5 915 aa23.31■■□□□ 1.32
PABPC1-217ENST00000521067 GPRASP2Q96D09 838 aa23.31■■□□□ 1.32
PABPC1-217ENST00000521067 ZNF215Q9UL58 517 aaPredicted RBP23.31■■□□□ 1.32
PABPC1-217ENST00000521067 SLC12A7Q9Y666 1083 aa23.31■■□□□ 1.32
PABPC1-217ENST00000521067 COL4A4P53420 1690 aaPredicted RBP23.31■■□□□ 1.32
PABPC1-217ENST00000521067 UPP2O95045 317 aa23.3■■□□□ 1.32
PABPC1-217ENST00000521067 CALM1P0DP23 149 aa23.3■■□□□ 1.32
PABPC1-217ENST00000521067 CALM2P0DP24 149 aa23.3■■□□□ 1.32
PABPC1-217ENST00000521067 CALM3P0DP25 149 aa23.3■■□□□ 1.32
PABPC1-217ENST00000521067 PKD2L1Q9P0L9 805 aa23.3■■□□□ 1.32
PABPC1-217ENST00000521067 PCDHA6Q9UN73 950 aa23.3■■□□□ 1.32
PABPC1-217ENST00000521067 PCDHA8Q9Y5H6 950 aa23.3■■□□□ 1.32
PABPC1-217ENST00000521067 NRCAMQ92823 1304 aa23.3■■□□□ 1.32
PABPC1-217ENST00000521067 EPC2Q52LR7 807 aa23.29■■□□□ 1.32
PABPC1-217ENST00000521067 SGMS1Q86VZ5 419 aa23.29■■□□□ 1.32
PABPC1-217ENST00000521067 GIMAP8Q8ND71 665 aaPredicted RBP23.29■■□□□ 1.32
PABPC1-217ENST00000521067 FBXO22Q8NEZ5 403 aa23.29■■□□□ 1.32
PABPC1-217ENST00000521067 SEPT1Q8WYJ6 367 aa23.29■■□□□ 1.32
PABPC1-217ENST00000521067 ANO2Q9NQ90 1003 aa23.29■■□□□ 1.32
PABPC1-217ENST00000521067 MICAL3Q7RTP6 2002 aa23.28■■□□□ 1.32
PABPC1-217ENST00000521067 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.28■■□□□ 1.32
PABPC1-217ENST00000521067 MARK3P27448 753 aa23.28■■□□□ 1.32
PABPC1-217ENST00000521067 MARCH8Q5T0T0 291 aa23.28■■□□□ 1.32
PABPC1-217ENST00000521067 TYW1BQ6NUM6 668 aa23.28■■□□□ 1.32
PABPC1-217ENST00000521067 RPAINQ86UA6 219 aa23.28■■□□□ 1.32
PABPC1-217ENST00000521067 MICU3Q86XE3 530 aa23.28■■□□□ 1.32
PABPC1-217ENST00000521067 ZBTB10Q96DT7 871 aa23.28■■□□□ 1.32
PABPC1-217ENST00000521067 PCYT2Q99447 389 aa23.28■■□□□ 1.32
PABPC1-217ENST00000521067 IFIH1Q9BYX4 1025 aaKnown RBP23.28■■□□□ 1.32
PABPC1-217ENST00000521067 JADE2Q9NQC1 790 aa23.28■■□□□ 1.32
PABPC1-217ENST00000521067 MGAT3Q09327 533 aa23.27■■□□□ 1.32
PABPC1-217ENST00000521067 MTMR1Q13613 665 aa23.27■■□□□ 1.32
PABPC1-217ENST00000521067 HEATR3Q7Z4Q2 680 aa23.27■■□□□ 1.32
PABPC1-217ENST00000521067 CYP2W1Q8TAV3 490 aa23.27■■□□□ 1.32
PABPC1-217ENST00000521067 KHSRPQ92945 711 aaKnown RBP eCLIP23.27■■□□□ 1.32
PABPC1-217ENST00000521067 CDHR1Q96JP9 859 aa23.27■■□□□ 1.32
PABPC1-217ENST00000521067 YME1L1Q96TA2 773 aa23.27■■□□□ 1.32
PABPC1-217ENST00000521067 EPHX3Q9H6B9 360 aa23.27■■□□□ 1.32
PABPC1-217ENST00000521067 EHMT1Q9H9B1 1298 aa23.27■■□□□ 1.32
PABPC1-217ENST00000521067 GHRP10912 638 aa23.26■■□□□ 1.31
PABPC1-217ENST00000521067 EXOSC10Q01780 885 aaKnown RBP23.26■■□□□ 1.31
PABPC1-217ENST00000521067 FUT2Q10981 343 aa23.26■■□□□ 1.31
PABPC1-217ENST00000521067 PPFIA1Q13136 1202 aa23.26■■□□□ 1.31
PABPC1-217ENST00000521067 GRIK4Q16099 956 aa23.26■■□□□ 1.31
PABPC1-217ENST00000521067 WWC2Q6AWC2 1192 aa23.26■■□□□ 1.31
PABPC1-217ENST00000521067 TCEANC2Q96MN5 208 aa23.26■■□□□ 1.31
PABPC1-217ENST00000521067 UBE2ZQ9H832 354 aaPredicted RBP23.26■■□□□ 1.31
PABPC1-217ENST00000521067 CD320Q9NPF0 282 aa23.26■■□□□ 1.31
PABPC1-217ENST00000521067 BRPF3Q9ULD4 1205 aa23.26■■□□□ 1.31
PABPC1-217ENST00000521067 MBLAC1A4D2B0 266 aaPredicted RBP23.25■■□□□ 1.31
PABPC1-217ENST00000521067 SPDYE3A6NKU9 549 aa23.25■■□□□ 1.31
PABPC1-217ENST00000521067 LPIN1Q14693 890 aa23.25■■□□□ 1.31
PABPC1-217ENST00000521067 RASEFQ8IZ41 740 aa23.25■■□□□ 1.31
PABPC1-217ENST00000521067 DNAJB3Q8WWF6 145 aa23.25■■□□□ 1.31
PABPC1-217ENST00000521067 APBB2Q92870 758 aa23.25■■□□□ 1.31
PABPC1-217ENST00000521067 PGBD1Q96JS3 809 aa23.25■■□□□ 1.31
PABPC1-217ENST00000521067 ERAP1Q9NZ08 941 aa23.25■■□□□ 1.31
PABPC1-217ENST00000521067 TAF2Q6P1X5 1199 aa23.24■■□□□ 1.31
PABPC1-217ENST00000521067 APOA5Q6Q788 366 aa23.24■■□□□ 1.31
PABPC1-217ENST00000521067 TMEM192Q8IY95 271 aa23.24■■□□□ 1.31
PABPC1-217ENST00000521067 GLG1Q92896 1179 aa23.24■■□□□ 1.31
PABPC1-217ENST00000521067 MRPL38Q96DV4 380 aaKnown RBP23.24■■□□□ 1.31
PABPC1-217ENST00000521067 SMARCAD1Q9H4L7 1026 aa23.24■■□□□ 1.31
PABPC1-217ENST00000521067 KCNH7Q9NS40 1196 aa23.24■■□□□ 1.31
PABPC1-217ENST00000521067 CNTNAP5Q8WYK1 1306 aa23.24■■□□□ 1.31
PABPC1-217ENST00000521067 MYO7AQ13402 2215 aa23.24■■□□□ 1.31
PABPC1-217ENST00000521067 SIP14410 1827 aa23.24■■□□□ 1.31
PABPC1-217ENST00000521067 H3BNC9 293 aa23.23■■□□□ 1.31
PABPC1-217ENST00000521067 ENPP3O14638 875 aa23.23■■□□□ 1.31
PABPC1-217ENST00000521067 MAFGO15525 162 aa23.23■■□□□ 1.31
PABPC1-217ENST00000521067 LINC00271P0C7V0 271 aa23.23■■□□□ 1.31
PABPC1-217ENST00000521067 GPM6BQ13491 265 aa23.23■■□□□ 1.31
PABPC1-217ENST00000521067 ADCK5Q3MIX3 580 aa23.23■■□□□ 1.31
PABPC1-217ENST00000521067 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.23■■□□□ 1.31
PABPC1-217ENST00000521067 NEK1Q96PY6 1258 aa23.23■■□□□ 1.31
PABPC1-217ENST00000521067 MXRA8Q9BRK3 442 aa23.23■■□□□ 1.31
PABPC1-217ENST00000521067 TUBE1Q9UJT0 475 aa23.23■■□□□ 1.31
PABPC1-217ENST00000521067 ARP10275 920 aa23.22■■□□□ 1.31
PABPC1-217ENST00000521067 INSRRP14616 1297 aa23.22■■□□□ 1.31
PABPC1-217ENST00000521067 KCNA5P22460 613 aa23.22■■□□□ 1.31
PABPC1-217ENST00000521067 IGBP1P78318 339 aa23.22■■□□□ 1.31
PABPC1-217ENST00000521067 BMP2KLQ5H9B9 411 aa23.22■■□□□ 1.31
PABPC1-217ENST00000521067 FBXO47Q5MNV8 452 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms