RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 FAM177A1Q8N128 213 aaPredicted RBP8.8□□□□□ -1
PTPN12-213ENST00000519553 C2orf69Q8N8R5 385 aa8.8□□□□□ -1
PTPN12-213ENST00000519553 PPP1R16BQ96T49 567 aa8.8□□□□□ -1
PTPN12-213ENST00000519553 HSPBP1Q9NZL4 362 aa8.8□□□□□ -1
PTPN12-213ENST00000519553 MAPRE3Q9UPY8 281 aa8.8□□□□□ -1
PTPN12-213ENST00000519553 ATP23Q9Y6H3 246 aa8.8□□□□□ -1
PTPN12-213ENST00000519553 SLC12A8A0AV02 714 aa8.79□□□□□ -1
PTPN12-213ENST00000519553 CLASP2O75122 1294 aaKnown RBP8.79□□□□□ -1
PTPN12-213ENST00000519553 VIL1P09327 827 aaKnown RBP8.79□□□□□ -1
PTPN12-213ENST00000519553 TMEM253P0C7T8 217 aa8.79□□□□□ -1
PTPN12-213ENST00000519553 ZBTB48P10074 688 aaPredicted RBP8.79□□□□□ -1
PTPN12-213ENST00000519553 PTPN1P18031 435 aaKnown RBP8.79□□□□□ -1
PTPN12-213ENST00000519553 SSPNQ14714 243 aa8.79□□□□□ -1
PTPN12-213ENST00000519553 SKOR2Q2VWA4 1001 aaPredicted RBP8.79□□□□□ -1
PTPN12-213ENST00000519553 PAN2Q504Q3 1202 aaKnown RBP8.79□□□□□ -1
PTPN12-213ENST00000519553 CREB3L3Q68CJ9 461 aa8.79□□□□□ -1
PTPN12-213ENST00000519553 SMARCC2Q8TAQ2 1214 aa8.79□□□□□ -1
PTPN12-213ENST00000519553 TOE1Q96GM8 510 aaKnown RBP8.79□□□□□ -1
PTPN12-213ENST00000519553 SIGLEC10Q96LC7 697 aa8.79□□□□□ -1
PTPN12-213ENST00000519553 SYT3Q9BQG1 590 aa8.79□□□□□ -1
PTPN12-213ENST00000519553 EPB41L4AQ9HCS5 686 aaPredicted RBP8.79□□□□□ -1
PTPN12-213ENST00000519553 B4GALT6Q9UBX8 382 aa8.79□□□□□ -1
PTPN12-213ENST00000519553 FAHP16930 419 aa8.78□□□□□ -1
PTPN12-213ENST00000519553 LIMS1P48059 325 aa8.78□□□□□ -1
PTPN12-213ENST00000519553 IRF9Q00978 393 aa8.78□□□□□ -1
PTPN12-213ENST00000519553 PROSER1Q86XN7 944 aa8.78□□□□□ -1
PTPN12-213ENST00000519553 SLC38A3Q99624 504 aa8.78□□□□□ -1
PTPN12-213ENST00000519553 YIPF4Q9BSR8 244 aa8.78□□□□□ -1
PTPN12-213ENST00000519553 BOCQ9BWV1 1114 aa8.78□□□□□ -1
PTPN12-213ENST00000519553 CABP5Q9NP86 173 aa8.78□□□□□ -1
PTPN12-213ENST00000519553 WASF3Q9UPY6 502 aa8.78□□□□□ -1
PTPN12-213ENST00000519553 PTPDC1A2A3K4 754 aa8.77□□□□□ -1.01
PTPN12-213ENST00000519553 ZNF891A8MT65 544 aaPredicted RBP8.77□□□□□ -1.01
PTPN12-213ENST00000519553 NFIBO00712 420 aa8.77□□□□□ -1.01
PTPN12-213ENST00000519553 F2P00734 622 aa8.77□□□□□ -1.01
PTPN12-213ENST00000519553 C4BPAP04003 597 aaKnown RBP8.77□□□□□ -1.01
PTPN12-213ENST00000519553 GJA4P35212 333 aa8.77□□□□□ -1.01
PTPN12-213ENST00000519553 DSG1Q02413 1049 aa8.77□□□□□ -1.01
PTPN12-213ENST00000519553 ARHGAP44Q17R89 818 aa8.77□□□□□ -1.01
PTPN12-213ENST00000519553 BTBD8Q5XKL5 378 aa8.77□□□□□ -1.01
PTPN12-213ENST00000519553 CD300LDQ6UXZ3 194 aa8.77□□□□□ -1.01
PTPN12-213ENST00000519553 ZC3H18Q86VM9 953 aaKnown RBP8.77□□□□□ -1.01
PTPN12-213ENST00000519553 KIF18BQ86Y91 864 aa8.77□□□□□ -1.01
PTPN12-213ENST00000519553 AHI1Q8N157 1196 aa8.77□□□□□ -1.01
PTPN12-213ENST00000519553 DLG3Q92796 817 aa8.77□□□□□ -1.01
PTPN12-213ENST00000519553 RBPJLQ9UBG7 517 aa8.77□□□□□ -1.01
PTPN12-213ENST00000519553 SMG5Q9UPR3 1016 aaKnown RBP8.77□□□□□ -1.01
PTPN12-213ENST00000519553 B3GALT1Q9Y5Z6 326 aa8.77□□□□□ -1.01
PTPN12-213ENST00000519553 IRAK3Q9Y616 596 aa8.77□□□□□ -1.01
PTPN12-213ENST00000519553 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.76□□□□□ -1.01
PTPN12-213ENST00000519553 TCAF2A6NFQ2 919 aa8.76□□□□□ -1.01
PTPN12-213ENST00000519553 SCDO00767 359 aa8.76□□□□□ -1.01
PTPN12-213ENST00000519553 DVL2O14641 736 aa8.76□□□□□ -1.01
PTPN12-213ENST00000519553 CYP2C8P10632 490 aa8.76□□□□□ -1.01
PTPN12-213ENST00000519553 THBS2P35442 1172 aa8.76□□□□□ -1.01
PTPN12-213ENST00000519553 FOXO4P98177 505 aa8.76□□□□□ -1.01
PTPN12-213ENST00000519553 FAM129CQ86XR2 697 aa8.76□□□□□ -1.01
PTPN12-213ENST00000519553 KRTAP1-3Q8IUG1 177 aa8.76□□□□□ -1.01
PTPN12-213ENST00000519553 DDX11Q96FC9 970 aa8.76□□□□□ -1.01
PTPN12-213ENST00000519553 GORASP1Q9BQQ3 440 aa8.76□□□□□ -1.01
PTPN12-213ENST00000519553 NGRNQ9NPE2 291 aaKnown RBP8.76□□□□□ -1.01
PTPN12-213ENST00000519553 RIC8BQ9NVN3 520 aa8.76□□□□□ -1.01
PTPN12-213ENST00000519553 FAN1Q9Y2M0 1017 aa8.76□□□□□ -1.01
PTPN12-213ENST00000519553 PLA2G1BP04054 148 aaKnown RBP8.75□□□□□ -1.01
PTPN12-213ENST00000519553 PI3P19957 117 aa8.75□□□□□ -1.01
PTPN12-213ENST00000519553 NKX3-2P78367 333 aa8.75□□□□□ -1.01
PTPN12-213ENST00000519553 HTRA3P83110 453 aa8.75□□□□□ -1.01
PTPN12-213ENST00000519553 KRT26Q7Z3Y9 468 aa8.75□□□□□ -1.01
PTPN12-213ENST00000519553 NXPE1Q8N323 547 aa8.75□□□□□ -1.01
PTPN12-213ENST00000519553 LEO1Q8WVC0 666 aaPredicted RBP8.75□□□□□ -1.01
PTPN12-213ENST00000519553 NOX5Q96PH1 765 aa8.75□□□□□ -1.01
PTPN12-213ENST00000519553 CAAP1Q9H8G2 361 aa8.75□□□□□ -1.01
PTPN12-213ENST00000519553 SHROOM4Q9ULL8 1493 aa8.75□□□□□ -1.01
PTPN12-213ENST00000519553 KRT37O76014 449 aa8.74□□□□□ -1.01
PTPN12-213ENST00000519553 C8AP07357 584 aa8.74□□□□□ -1.01
PTPN12-213ENST00000519553 ATP2A2P16615 1042 aaKnown RBP8.74□□□□□ -1.01
PTPN12-213ENST00000519553 ITGA1P56199 1179 aa8.74□□□□□ -1.01
PTPN12-213ENST00000519553 ZNF124Q15973 351 aa8.74□□□□□ -1.01
PTPN12-213ENST00000519553 CD276Q5ZPR3 534 aa8.74□□□□□ -1.01
PTPN12-213ENST00000519553 LIPIQ6XZB0 460 aa8.74□□□□□ -1.01
PTPN12-213ENST00000519553 EP400NLQ6ZTU2 488 aa8.74□□□□□ -1.01
PTPN12-213ENST00000519553 CILP2Q8IUL8 1156 aa8.74□□□□□ -1.01
PTPN12-213ENST00000519553 UBR7Q8N806 425 aa8.74□□□□□ -1.01
PTPN12-213ENST00000519553 CHAC2Q8WUX2 184 aa8.74□□□□□ -1.01
PTPN12-213ENST00000519553 TMX1Q9H3N1 280 aa8.74□□□□□ -1.01
PTPN12-213ENST00000519553 KCNH7Q9NS40 1196 aa8.74□□□□□ -1.01
PTPN12-213ENST00000519553 TXKP42681 527 aa8.73□□□□□ -1.01
PTPN12-213ENST00000519553 LINC00310P59036 64 aa8.73□□□□□ -1.01
PTPN12-213ENST00000519553 KCNA10Q16322 511 aa8.73□□□□□ -1.01
PTPN12-213ENST00000519553 FILIP1Q7Z7B0 1213 aa8.73□□□□□ -1.01
PTPN12-213ENST00000519553 AFAP1L2Q8N4X5 818 aa8.73□□□□□ -1.01
PTPN12-213ENST00000519553 LINC00482Q8N8I6 264 aa8.73□□□□□ -1.01
PTPN12-213ENST00000519553 SMC1BQ8NDV3 1235 aa8.73□□□□□ -1.01
PTPN12-213ENST00000519553 SPC25Q9HBM1 224 aa8.73□□□□□ -1.01
PTPN12-213ENST00000519553 H2AFY2Q9P0M6 372 aaPredicted RBP8.73□□□□□ -1.01
PTPN12-213ENST00000519553 CNOT6Q9ULM6 557 aaKnown RBP8.73□□□□□ -1.01
PTPN12-213ENST00000519553 KCTD3Q9Y597 815 aa8.73□□□□□ -1.01
PTPN12-213ENST00000519553 PRAMEF25A6NGN4 478 aa8.72□□□□□ -1.01
PTPN12-213ENST00000519553 RASSF10A6NK89 507 aa8.72□□□□□ -1.01
PTPN12-213ENST00000519553 DNAJC6O75061 913 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms