RNA–Protein interactions for RNA: ENST00000518371.2

MRPS28-203, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-203ENST00000518371 TKFCQ3LXA3 575 aa7.1□□□□□ -1.27
MRPS28-203ENST00000518371 ASPRV1Q53RT3 343 aa7.1□□□□□ -1.27
MRPS28-203ENST00000518371 NKAPLQ5M9Q1 402 aa7.1□□□□□ -1.27
MRPS28-203ENST00000518371 TBCELQ5QJ74 424 aa7.1□□□□□ -1.27
MRPS28-203ENST00000518371 SYNE3Q6ZMZ3 975 aa7.1□□□□□ -1.27
MRPS28-203ENST00000518371 CATIPQ7Z7H3 387 aa7.1□□□□□ -1.27
MRPS28-203ENST00000518371 MB21D2Q8IYB1 491 aaPredicted RBP7.1□□□□□ -1.27
MRPS28-203ENST00000518371 ANKRD35Q8N283 1001 aa7.1□□□□□ -1.27
MRPS28-203ENST00000518371 TMTC2Q8N394 836 aa7.1□□□□□ -1.27
MRPS28-203ENST00000518371 NPLOC4Q8TAT6 608 aa7.1□□□□□ -1.27
MRPS28-203ENST00000518371 NUP133Q8WUM0 1156 aa7.1□□□□□ -1.27
MRPS28-203ENST00000518371 TRIB2Q92519 343 aa7.1□□□□□ -1.27
MRPS28-203ENST00000518371 TMEM87BQ96K49 555 aa7.1□□□□□ -1.27
MRPS28-203ENST00000518371 NEK1Q96PY6 1258 aa7.1□□□□□ -1.27
MRPS28-203ENST00000518371 MTA3Q9BTC8 594 aa7.1□□□□□ -1.27
MRPS28-203ENST00000518371 ACAD9Q9H845 621 aa7.1□□□□□ -1.27
MRPS28-203ENST00000518371 RNF146Q9NTX7 359 aa7.1□□□□□ -1.27
MRPS28-203ENST00000518371 SCHIP1Q9P0W5 487 aaPredicted RBP7.1□□□□□ -1.27
MRPS28-203ENST00000518371 PNMA2Q9UL42 364 aa7.1□□□□□ -1.27
MRPS28-203ENST00000518371 CCPG1Q9ULG6 757 aa7.1□□□□□ -1.27
MRPS28-203ENST00000518371 KIAA1024Q9UPX6 916 aa7.1□□□□□ -1.27
MRPS28-203ENST00000518371 PCDHGC4Q9Y5F7 938 aa7.1□□□□□ -1.27
MRPS28-203ENST00000518371 DCDC2BA2VCK2 349 aa7.09□□□□□ -1.27
MRPS28-203ENST00000518371 KLRF2D3W0D1 207 aa7.09□□□□□ -1.27
MRPS28-203ENST00000518371 ATXN7O15265 892 aaPredicted RBP7.09□□□□□ -1.27
MRPS28-203ENST00000518371 ICAM1P05362 532 aa7.09□□□□□ -1.27
MRPS28-203ENST00000518371 GJB1P08034 283 aa7.09□□□□□ -1.27
MRPS28-203ENST00000518371 HMGB1P09429 215 aaKnown RBP7.09□□□□□ -1.27
MRPS28-203ENST00000518371 CNGA1P29973 690 aa7.09□□□□□ -1.27
MRPS28-203ENST00000518371 CYP2C19P33261 490 aa7.09□□□□□ -1.27
MRPS28-203ENST00000518371 HSPA4P34932 840 aa7.09□□□□□ -1.27
MRPS28-203ENST00000518371 DGKGP49619 791 aa7.09□□□□□ -1.27
MRPS28-203ENST00000518371 ANTXR2P58335 489 aa7.09□□□□□ -1.27
MRPS28-203ENST00000518371 FGD1P98174 961 aa7.09□□□□□ -1.27
MRPS28-203ENST00000518371 MLLT1Q03111 559 aaPredicted RBP7.09□□□□□ -1.27
MRPS28-203ENST00000518371 TNP2Q05952 138 aa7.09□□□□□ -1.27
MRPS28-203ENST00000518371 CACNB2Q08289 660 aaPredicted RBP7.09□□□□□ -1.27
MRPS28-203ENST00000518371 TMEM132AQ24JP5 1023 aa7.09□□□□□ -1.27
MRPS28-203ENST00000518371 ARSJQ5FYB0 599 aaPredicted RBP7.09□□□□□ -1.27
MRPS28-203ENST00000518371 FIGNL1Q6PIW4 674 aa7.09□□□□□ -1.27
MRPS28-203ENST00000518371 NSMFQ6X4W1 530 aa7.09□□□□□ -1.27
MRPS28-203ENST00000518371 SLCO4C1Q6ZQN7 724 aa7.09□□□□□ -1.27
MRPS28-203ENST00000518371 DHX32Q7L7V1 743 aaKnown RBP7.09□□□□□ -1.27
MRPS28-203ENST00000518371 ADGRF4Q8IZF3 695 aa7.09□□□□□ -1.27
MRPS28-203ENST00000518371 CTCFLQ8NI51 663 aaPredicted RBP7.09□□□□□ -1.27
MRPS28-203ENST00000518371 IGDCC4Q8TDY8 1250 aa7.09□□□□□ -1.27
MRPS28-203ENST00000518371 DEFB118Q96PH6 123 aa7.09□□□□□ -1.27
MRPS28-203ENST00000518371 KRTAP4-7Q9BYR0 210 aa7.09□□□□□ -1.27
MRPS28-203ENST00000518371 LRRC2Q9BYS8 371 aa7.09□□□□□ -1.27
MRPS28-203ENST00000518371 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.09□□□□□ -1.27
MRPS28-203ENST00000518371 RANBP17Q9H2T7 1088 aaKnown RBP7.09□□□□□ -1.27
MRPS28-203ENST00000518371 CPVLQ9H3G5 476 aa7.09□□□□□ -1.27
MRPS28-203ENST00000518371 ZDHHC3Q9NYG2 299 aa7.09□□□□□ -1.27
MRPS28-203ENST00000518371 FLRT1Q9NZU1 646 aa7.09□□□□□ -1.27
MRPS28-203ENST00000518371 KLF15Q9UIH9 416 aa7.09□□□□□ -1.27
MRPS28-203ENST00000518371 ZNF536O15090 1300 aa7.08□□□□□ -1.28
MRPS28-203ENST00000518371 GREB1LQ9C091 1923 aaPredicted RBP7.08□□□□□ -1.28
MRPS28-203ENST00000518371 SH2B2O14492 632 aaPredicted RBP7.08□□□□□ -1.28
MRPS28-203ENST00000518371 EIF5BO60841 1220 aaKnown RBP7.08□□□□□ -1.28
MRPS28-203ENST00000518371 SGPL1O95470 568 aa7.08□□□□□ -1.28
MRPS28-203ENST00000518371 CALM1P0DP23 149 aa7.08□□□□□ -1.28
MRPS28-203ENST00000518371 CALM2P0DP24 149 aa7.08□□□□□ -1.28
MRPS28-203ENST00000518371 CALM3P0DP25 149 aa7.08□□□□□ -1.28
MRPS28-203ENST00000518371 MAPTP10636 758 aaKnown RBP7.08□□□□□ -1.28
MRPS28-203ENST00000518371 CD33P20138 364 aa7.08□□□□□ -1.28
MRPS28-203ENST00000518371 PSMA5P28066 241 aa7.08□□□□□ -1.28
MRPS28-203ENST00000518371 KIF5BP33176 963 aa7.08□□□□□ -1.28
MRPS28-203ENST00000518371 LIFRP42702 1097 aa7.08□□□□□ -1.28
MRPS28-203ENST00000518371 GJA8P48165 433 aa7.08□□□□□ -1.28
MRPS28-203ENST00000518371 RGS19P49795 217 aa7.08□□□□□ -1.28
MRPS28-203ENST00000518371 GRM4Q14833 912 aa7.08□□□□□ -1.28
MRPS28-203ENST00000518371 CDC37Q16543 378 aaPredicted RBP7.08□□□□□ -1.28
MRPS28-203ENST00000518371 ZNF792Q3KQV3 632 aa7.08□□□□□ -1.28
MRPS28-203ENST00000518371 ADCK5Q3MIX3 580 aa7.08□□□□□ -1.28
MRPS28-203ENST00000518371 MUM1L1Q5H9M0 696 aa7.08□□□□□ -1.28
MRPS28-203ENST00000518371 SH3PXD2AQ5TCZ1 1133 aa7.08□□□□□ -1.28
MRPS28-203ENST00000518371 OLFML2BQ68BL8 750 aa7.08□□□□□ -1.28
MRPS28-203ENST00000518371 ZNF654Q8IZM8 581 aa7.08□□□□□ -1.28
MRPS28-203ENST00000518371 STAG2Q8N3U4 1231 aa7.08□□□□□ -1.28
MRPS28-203ENST00000518371 U2AF1L4Q8WU68 220 aaKnown RBP7.08□□□□□ -1.28
MRPS28-203ENST00000518371 MAML3Q96JK9 1138 aa7.08□□□□□ -1.28
MRPS28-203ENST00000518371 TCEANC2Q96MN5 208 aa7.08□□□□□ -1.28
MRPS28-203ENST00000518371 JAKMIP1Q96N16 626 aaKnown RBP7.08□□□□□ -1.28
MRPS28-203ENST00000518371 JMJD4Q9H9V9 463 aa7.08□□□□□ -1.28
MRPS28-203ENST00000518371 LY9Q9HBG7 655 aa7.08□□□□□ -1.28
MRPS28-203ENST00000518371 NAP1L2Q9ULW6 460 aaPredicted RBP7.08□□□□□ -1.28
MRPS28-203ENST00000518371 DIS3Q9Y2L1 958 aaKnown RBP7.08□□□□□ -1.28
MRPS28-203ENST00000518371 SNX14Q9Y5W7 946 aa7.08□□□□□ -1.28
MRPS28-203ENST00000518371 SLC12A7Q9Y666 1083 aa7.08□□□□□ -1.28
MRPS28-203ENST00000518371 ZSWIM8A7E2V4 1837 aa7.08□□□□□ -1.28
MRPS28-203ENST00000518371 PTPDC1A2A3K4 754 aa7.07□□□□□ -1.28
MRPS28-203ENST00000518371 PALM3A6NDB9 673 aaPredicted RBP7.07□□□□□ -1.28
MRPS28-203ENST00000518371 KHNYNO15037 678 aaKnown RBP7.07□□□□□ -1.28
MRPS28-203ENST00000518371 EPB41L2O43491 1005 aaKnown RBP7.07□□□□□ -1.28
MRPS28-203ENST00000518371 DDAH1O94760 285 aa7.07□□□□□ -1.28
MRPS28-203ENST00000518371 EPXP11678 715 aa7.07□□□□□ -1.28
MRPS28-203ENST00000518371 CPA1P15085 419 aa7.07□□□□□ -1.28
MRPS28-203ENST00000518371 CAPN2P17655 700 aa7.07□□□□□ -1.28
MRPS28-203ENST00000518371 CCND3P30281 292 aaPredicted RBP7.07□□□□□ -1.28
MRPS28-203ENST00000518371 GNAQP50148 359 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms