RNA–Protein interactions for RNA: ENST00000517766.5

CD47-205, Transcript of CD47 molecule, humanhuman

TSL 2

Gene CD47, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-205ENST00000517766 CABP5Q9NP86 173 aa6.67□□□□□ -1.34
CD47-205ENST00000517766 MTMR4Q9NYA4 1195 aa6.67□□□□□ -1.34
CD47-205ENST00000517766 PI4KBQ9UBF8 816 aa6.67□□□□□ -1.34
CD47-205ENST00000517766 CCDC39Q9UFE4 941 aa6.67□□□□□ -1.34
CD47-205ENST00000517766 HDAC9Q9UKV0 1011 aa6.67□□□□□ -1.34
CD47-205ENST00000517766 HPSEQ9Y251 543 aa6.67□□□□□ -1.34
CD47-205ENST00000517766 SRPRBQ9Y5M8 271 aaKnown RBP6.67□□□□□ -1.34
CD47-205ENST00000517766 KCNMB2Q9Y691 235 aa6.67□□□□□ -1.34
CD47-205ENST00000517766 IGKV6D-41A0A0C4DH26 115 aa6.66□□□□□ -1.34
CD47-205ENST00000517766 DCDC2BA2VCK2 349 aa6.66□□□□□ -1.34
CD47-205ENST00000517766 KLRF2D3W0D1 207 aa6.66□□□□□ -1.34
CD47-205ENST00000517766 GOLGA6L19H0YKK7 550 aa6.66□□□□□ -1.34
CD47-205ENST00000517766 TTLL1O95922 423 aa6.66□□□□□ -1.34
CD47-205ENST00000517766 TPM3P06753 285 aa6.66□□□□□ -1.34
CD47-205ENST00000517766 THBS1P07996 1170 aa6.66□□□□□ -1.34
CD47-205ENST00000517766 AKR1B1P15121 316 aa6.66□□□□□ -1.34
CD47-205ENST00000517766 POLD1P28340 1107 aa6.66□□□□□ -1.34
CD47-205ENST00000517766 GNA11P29992 359 aa6.66□□□□□ -1.34
CD47-205ENST00000517766 ZNF165P49910 485 aa6.66□□□□□ -1.34
CD47-205ENST00000517766 TOB1P50616 345 aaPredicted RBP6.66□□□□□ -1.34
CD47-205ENST00000517766 RBM5P52756 815 aaKnown RBP eCLIP6.66□□□□□ -1.34
CD47-205ENST00000517766 SFSWAPQ12872 951 aaKnown RBP6.66□□□□□ -1.34
CD47-205ENST00000517766 GRIN2CQ14957 1233 aa6.66□□□□□ -1.34
CD47-205ENST00000517766 TTC38Q5R3I4 469 aa6.66□□□□□ -1.34
CD47-205ENST00000517766 SHC4Q6S5L8 630 aa6.66□□□□□ -1.34
CD47-205ENST00000517766 KRT25Q7Z3Z0 450 aa6.66□□□□□ -1.34
CD47-205ENST00000517766 BLIDQ8IZY5 108 aa6.66□□□□□ -1.34
CD47-205ENST00000517766 VWA5B2Q8N398 1253 aa6.66□□□□□ -1.34
CD47-205ENST00000517766 TNFRSF25Q93038 417 aa6.66□□□□□ -1.34
CD47-205ENST00000517766 RRP36Q96EU6 259 aaKnown RBP6.66□□□□□ -1.34
CD47-205ENST00000517766 CEP95Q96GE4 821 aa6.66□□□□□ -1.34
CD47-205ENST00000517766 MXD3Q9BW11 206 aa6.66□□□□□ -1.34
CD47-205ENST00000517766 CRISPLD1Q9H336 500 aa6.66□□□□□ -1.34
CD47-205ENST00000517766 BRD7Q9NPI1 651 aa6.66□□□□□ -1.34
CD47-205ENST00000517766 DDX4Q9NQI0 724 aaKnown RBP6.66□□□□□ -1.34
CD47-205ENST00000517766 CUEDC1Q9NWM3 386 aaPredicted RBP6.66□□□□□ -1.34
CD47-205ENST00000517766 BARHL2Q9NY43 387 aa6.66□□□□□ -1.34
CD47-205ENST00000517766 TMOD2Q9NZR1 351 aa6.66□□□□□ -1.34
CD47-205ENST00000517766 SEC63Q9UGP8 760 aaKnown RBP6.66□□□□□ -1.34
CD47-205ENST00000517766 FBXO2Q9UK22 296 aaPredicted RBP6.66□□□□□ -1.34
CD47-205ENST00000517766 PCDHA4Q9UN74 947 aa6.66□□□□□ -1.34
CD47-205ENST00000517766 PCDHB6Q9Y5E3 794 aa6.66□□□□□ -1.34
CD47-205ENST00000517766 CCDC194A0A1B0GVG4 234 aa6.65□□□□□ -1.34
CD47-205ENST00000517766 SCO2A0A1W2PP80 73 aa6.65□□□□□ -1.34
CD47-205ENST00000517766 ESYT2A0FGR8 921 aa6.65□□□□□ -1.34
CD47-205ENST00000517766 BECN2A8MW95 431 aa6.65□□□□□ -1.34
CD47-205ENST00000517766 GOLGA6L6A8MZA4 724 aa6.65□□□□□ -1.34
CD47-205ENST00000517766 EIF1AYO14602 144 aaKnown RBP6.65□□□□□ -1.34
CD47-205ENST00000517766 SNHG28P0DPA3 235 aa6.65□□□□□ -1.34
CD47-205ENST00000517766 PDHBP11177 359 aa6.65□□□□□ -1.34
CD47-205ENST00000517766 DPEP1P16444 411 aa6.65□□□□□ -1.34
CD47-205ENST00000517766 SHMT1P34896 483 aa6.65□□□□□ -1.34
CD47-205ENST00000517766 NLRP12P59046 1061 aa6.65□□□□□ -1.34
CD47-205ENST00000517766 SRSF11Q05519 484 aaKnown RBP6.65□□□□□ -1.34
CD47-205ENST00000517766 NPY5RQ15761 445 aa6.65□□□□□ -1.34
CD47-205ENST00000517766 CFAP100Q494V2 611 aa6.65□□□□□ -1.34
CD47-205ENST00000517766 EFHC2Q5JST6 749 aa6.65□□□□□ -1.34
CD47-205ENST00000517766 GPATCH4Q5T3I0 446 aaKnown RBP6.65□□□□□ -1.34
CD47-205ENST00000517766 ARTNQ5T4W7 220 aa6.65□□□□□ -1.34
CD47-205ENST00000517766 ARL6IP4Q66PJ3 421 aaKnown RBP6.65□□□□□ -1.34
CD47-205ENST00000517766 ZNF438Q7Z4V0 828 aa6.65□□□□□ -1.34
CD47-205ENST00000517766 CEP57L1Q8IYX8 460 aa6.65□□□□□ -1.34
CD47-205ENST00000517766 CNNM3Q8NE01 707 aa6.65□□□□□ -1.34
CD47-205ENST00000517766 SHISA4Q96DD7 197 aa6.65□□□□□ -1.34
CD47-205ENST00000517766 BPIFA3Q9BQP9 254 aa6.65□□□□□ -1.34
CD47-205ENST00000517766 RIOX1Q9H6W3 641 aa6.65□□□□□ -1.34
CD47-205ENST00000517766 CBX8Q9HC52 389 aa6.65□□□□□ -1.34
CD47-205ENST00000517766 C6orf50Q9HD87 102 aa6.65□□□□□ -1.34
CD47-205ENST00000517766 ZFP64Q9NPA5 681 aa6.65□□□□□ -1.34
CD47-205ENST00000517766 PIM2Q9P1W9 311 aa6.65□□□□□ -1.34
CD47-205ENST00000517766 PARP2Q9UGN5 583 aa6.65□□□□□ -1.34
CD47-205ENST00000517766 USP25Q9UHP3 1055 aa6.65□□□□□ -1.34
CD47-205ENST00000517766 KCNH3Q9ULD8 1083 aa6.65□□□□□ -1.34
CD47-205ENST00000517766 GPC6Q9Y625 555 aaPredicted RBP6.65□□□□□ -1.34
CD47-205ENST00000517766 ATRNL1Q5VV63 1379 aa6.65□□□□□ -1.35
CD47-205ENST00000517766 ATAD5Q96QE3 1844 aa6.64□□□□□ -1.35
CD47-205ENST00000517766 EP400Q96L91 3159 aa6.64□□□□□ -1.35
CD47-205ENST00000517766 hCG_1642624A0A1W2PR95 340 aa6.64□□□□□ -1.35
CD47-205ENST00000517766 YDJCA8MPS7 323 aa6.64□□□□□ -1.35
CD47-205ENST00000517766 SMTNL1A8MU46 457 aa6.64□□□□□ -1.35
CD47-205ENST00000517766 STXBP3O00186 592 aa6.64□□□□□ -1.35
CD47-205ENST00000517766 LAD1O00515 517 aa6.64□□□□□ -1.35
CD47-205ENST00000517766 KHNYNO15037 678 aaKnown RBP6.64□□□□□ -1.35
CD47-205ENST00000517766 CYTH3O43739 400 aa6.64□□□□□ -1.35
CD47-205ENST00000517766 XYLBO75191 536 aa6.64□□□□□ -1.35
CD47-205ENST00000517766 ADCY5O95622 1261 aa6.64□□□□□ -1.35
CD47-205ENST00000517766 PTMAP06454 111 aaKnown RBP6.64□□□□□ -1.35
CD47-205ENST00000517766 VIL1P09327 827 aaKnown RBP6.64□□□□□ -1.35
CD47-205ENST00000517766 ATP2B1P20020 1258 aa6.64□□□□□ -1.35
CD47-205ENST00000517766 KCNA3P22001 575 aa6.64□□□□□ -1.35
CD47-205ENST00000517766 MSNP26038 577 aaKnown RBP6.64□□□□□ -1.35
CD47-205ENST00000517766 NAPAP54920 295 aa6.64□□□□□ -1.35
CD47-205ENST00000517766 TPM4P67936 248 aa6.64□□□□□ -1.35
CD47-205ENST00000517766 ATP2C1P98194 919 aaPredicted RBP6.64□□□□□ -1.35
CD47-205ENST00000517766 NFIAQ12857 509 aa6.64□□□□□ -1.35
CD47-205ENST00000517766 ORC2Q13416 577 aaPredicted RBP6.64□□□□□ -1.35
CD47-205ENST00000517766 DBN1Q16643 649 aa6.64□□□□□ -1.35
CD47-205ENST00000517766 CERKLQ49MI3 558 aaPredicted RBP6.64□□□□□ -1.35
CD47-205ENST00000517766 WWC2Q6AWC2 1192 aa6.64□□□□□ -1.35
CD47-205ENST00000517766 TATDN1Q6P1N9 297 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms