RNA–Protein interactions for RNA: ENST00000515658.1

COL4A5-210, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-210ENST00000515658 MYOGP15173 224 aa11.36□□□□□ -0.59
COL4A5-210ENST00000515658 COL9A1P20849 921 aa11.36□□□□□ -0.59
COL4A5-210ENST00000515658 METAP2P50579 478 aaKnown RBP eCLIP11.36□□□□□ -0.59
COL4A5-210ENST00000515658 KRT32Q14532 448 aa11.36□□□□□ -0.59
COL4A5-210ENST00000515658 PCNX4Q63HM2 1172 aa11.36□□□□□ -0.59
COL4A5-210ENST00000515658 TRAF7Q6Q0C0 670 aa11.36□□□□□ -0.59
COL4A5-210ENST00000515658 OTOP2Q7RTS6 562 aa11.36□□□□□ -0.59
COL4A5-210ENST00000515658 TMCO2Q7Z6W1 182 aaPredicted RBP11.36□□□□□ -0.59
COL4A5-210ENST00000515658 DEFB128Q7Z7B8 93 aa11.36□□□□□ -0.59
COL4A5-210ENST00000515658 RASGRP4Q8TDF6 673 aa11.36□□□□□ -0.59
COL4A5-210ENST00000515658 AIFM3Q96NN9 605 aa11.36□□□□□ -0.59
COL4A5-210ENST00000515658 ZBED2Q9BTP6 218 aa11.36□□□□□ -0.59
COL4A5-210ENST00000515658 AGXT2Q9BYV1 514 aa11.36□□□□□ -0.59
COL4A5-210ENST00000515658 MAP3K20Q9NYL2 800 aaKnown RBP11.36□□□□□ -0.59
COL4A5-210ENST00000515658 PCDHA6Q9UN73 950 aa11.36□□□□□ -0.59
COL4A5-210ENST00000515658 PCDHA8Q9Y5H6 950 aa11.36□□□□□ -0.59
COL4A5-210ENST00000515658 TANC1Q9C0D5 1861 aa11.36□□□□□ -0.59
COL4A5-210ENST00000515658 B4DLN1 442 aa11.35□□□□□ -0.59
COL4A5-210ENST00000515658 ARHGEF15O94989 841 aa11.35□□□□□ -0.59
COL4A5-210ENST00000515658 LGALS2P05162 132 aa11.35□□□□□ -0.59
COL4A5-210ENST00000515658 KCNA2P16389 499 aa11.35□□□□□ -0.59
COL4A5-210ENST00000515658 PDIA3P30101 505 aaKnown RBP11.35□□□□□ -0.59
COL4A5-210ENST00000515658 ICAM3P32942 547 aa11.35□□□□□ -0.59
COL4A5-210ENST00000515658 MRPL12P52815 198 aaKnown RBP11.35□□□□□ -0.59
COL4A5-210ENST00000515658 RABGGTBP53611 331 aa11.35□□□□□ -0.59
COL4A5-210ENST00000515658 NAPAP54920 295 aa11.35□□□□□ -0.59
COL4A5-210ENST00000515658 LAMC2Q13753 1193 aa11.35□□□□□ -0.59
COL4A5-210ENST00000515658 MBTPS1Q14703 1052 aa11.35□□□□□ -0.59
COL4A5-210ENST00000515658 DGKDQ16760 1214 aa11.35□□□□□ -0.59
COL4A5-210ENST00000515658 KIAA0753Q2KHM9 967 aa11.35□□□□□ -0.59
COL4A5-210ENST00000515658 TRIM71Q2Q1W2 868 aaKnown RBP11.35□□□□□ -0.59
COL4A5-210ENST00000515658 NFRKBQ6P4R8 1299 aa11.35□□□□□ -0.59
COL4A5-210ENST00000515658 SPRED2Q7Z698 418 aa11.35□□□□□ -0.59
COL4A5-210ENST00000515658 GPR20Q99678 358 aa11.35□□□□□ -0.59
COL4A5-210ENST00000515658 IL23AQ9NPF7 189 aa11.35□□□□□ -0.59
COL4A5-210ENST00000515658 RBM28Q9NW13 759 aaKnown RBP11.35□□□□□ -0.59
COL4A5-210ENST00000515658 UBIAD1Q9Y5Z9 338 aa11.35□□□□□ -0.59
COL4A5-210ENST00000515658 NID2Q14112 1375 aa11.35□□□□□ -0.59
COL4A5-210ENST00000515658 GBF1Q92538 1859 aa11.35□□□□□ -0.59
COL4A5-210ENST00000515658 TET1Q8NFU7 2136 aa11.35□□□□□ -0.59
COL4A5-210ENST00000515658 CHD7Q9P2D1 2997 aa11.34□□□□□ -0.59
COL4A5-210ENST00000515658 SMCO2A6NFE2 343 aa11.34□□□□□ -0.59
COL4A5-210ENST00000515658 REC8O95072 547 aa11.34□□□□□ -0.59
COL4A5-210ENST00000515658 IQCF3P0C7M6 154 aa11.34□□□□□ -0.59
COL4A5-210ENST00000515658 ARP10275 920 aa11.34□□□□□ -0.59
COL4A5-210ENST00000515658 CLK2P49760 499 aaKnown RBP11.34□□□□□ -0.59
COL4A5-210ENST00000515658 FGD1P98174 961 aa11.34□□□□□ -0.59
COL4A5-210ENST00000515658 STK3Q13188 491 aa11.34□□□□□ -0.59
COL4A5-210ENST00000515658 PPIGQ13427 754 aaKnown RBP eCLIP11.34□□□□□ -0.592e-7■■■□□ 16.3
COL4A5-210ENST00000515658 PTGISQ16647 500 aa11.34□□□□□ -0.59
COL4A5-210ENST00000515658 UTP14CQ5TAP6 766 aaKnown RBP11.34□□□□□ -0.59
COL4A5-210ENST00000515658 JAKMIP3Q5VZ66 844 aa11.34□□□□□ -0.59
COL4A5-210ENST00000515658 SYNE3Q6ZMZ3 975 aa11.34□□□□□ -0.59
COL4A5-210ENST00000515658 RUFY3Q7L099 469 aa11.34□□□□□ -0.59
COL4A5-210ENST00000515658 TMEM199Q8N511 208 aa11.34□□□□□ -0.59
COL4A5-210ENST00000515658 SAMD3Q8N6K7 520 aa11.34□□□□□ -0.59
COL4A5-210ENST00000515658 CUL5Q93034 780 aa11.34□□□□□ -0.59
COL4A5-210ENST00000515658 MLXIPQ9HAP2 919 aa11.34□□□□□ -0.59
COL4A5-210ENST00000515658 CDHR5Q9HBB8 845 aa11.34□□□□□ -0.59
COL4A5-210ENST00000515658 RIC8AQ9NPQ8 531 aa11.34□□□□□ -0.59
COL4A5-210ENST00000515658 BARHL2Q9NY43 387 aa11.34□□□□□ -0.59
COL4A5-210ENST00000515658 GTF2IRD1Q9UHL9 959 aa11.34□□□□□ -0.59
COL4A5-210ENST00000515658 YBX2Q9Y2T7 364 aaKnown RBP11.34□□□□□ -0.59
COL4A5-210ENST00000515658 PTPRSQ13332 1948 aa11.34□□□□□ -0.59
COL4A5-210ENST00000515658 TRIP12Q14669 1992 aaPredicted RBP11.34□□□□□ -0.59
COL4A5-210ENST00000515658 GSTTP1A0A1W2PQM5 241 aa11.33□□□□□ -0.6
COL4A5-210ENST00000515658 FIBPO43427 364 aa11.33□□□□□ -0.6
COL4A5-210ENST00000515658 KPNA6O60684 536 aa11.33□□□□□ -0.6
COL4A5-210ENST00000515658 NBNO60934 754 aa11.33□□□□□ -0.6
COL4A5-210ENST00000515658 LARGE1O95461 756 aa11.33□□□□□ -0.6
COL4A5-210ENST00000515658 ADCY7P51828 1080 aa11.33□□□□□ -0.6
COL4A5-210ENST00000515658 ITGB3BPQ13352 177 aaPredicted RBP11.33□□□□□ -0.6
COL4A5-210ENST00000515658 PFKFB3Q16875 520 aaPredicted RBP11.33□□□□□ -0.6
COL4A5-210ENST00000515658 ADGRD1Q6QNK2 874 aa11.33□□□□□ -0.6
COL4A5-210ENST00000515658 SESTD1Q86VW0 696 aa11.33□□□□□ -0.6
COL4A5-210ENST00000515658 HERVK_113Q902F9 699 aa11.33□□□□□ -0.6
COL4A5-210ENST00000515658 PCYT2Q99447 389 aa11.33□□□□□ -0.6
COL4A5-210ENST00000515658 ANO3Q9BYT9 981 aa11.33□□□□□ -0.6
COL4A5-210ENST00000515658 PBX4Q9BYU1 374 aa11.33□□□□□ -0.6
COL4A5-210ENST00000515658 SEMA6BQ9H3T3 888 aa11.33□□□□□ -0.6
COL4A5-210ENST00000515658 RNPEPQ9H4A4 650 aa11.33□□□□□ -0.6
COL4A5-210ENST00000515658 NPDC1Q9NQX5 325 aaPredicted RBP11.33□□□□□ -0.6
COL4A5-210ENST00000515658 GJB4Q9NTQ9 266 aa11.33□□□□□ -0.6
COL4A5-210ENST00000515658 VPS54Q9P1Q0 977 aa11.33□□□□□ -0.6
COL4A5-210ENST00000515658 VPS9D1Q9Y2B5 631 aa11.33□□□□□ -0.6
COL4A5-210ENST00000515658 FAM86B1E9PN63 330 aa11.32□□□□□ -0.6
COL4A5-210ENST00000515658 TREHO43280 583 aa11.32□□□□□ -0.6
COL4A5-210ENST00000515658 HMGB1P09429 215 aaKnown RBP11.32□□□□□ -0.6
COL4A5-210ENST00000515658 FAM86B2P0C5J1 330 aa11.32□□□□□ -0.6
COL4A5-210ENST00000515658 SMIM10L2AP0DMW4 78 aa11.32□□□□□ -0.6
COL4A5-210ENST00000515658 SMIM10L2BP0DMW5 78 aa11.32□□□□□ -0.6
COL4A5-210ENST00000515658 SCG2P13521 617 aa11.32□□□□□ -0.6
COL4A5-210ENST00000515658 DNAJB2P25686 324 aa11.32□□□□□ -0.6
COL4A5-210ENST00000515658 MARK3P27448 753 aa11.32□□□□□ -0.6
COL4A5-210ENST00000515658 EVCP57679 992 aa11.32□□□□□ -0.6
COL4A5-210ENST00000515658 SMAD3P84022 425 aaKnown RBP11.32□□□□□ -0.6
COL4A5-210ENST00000515658 TRAF1Q13077 416 aa11.32□□□□□ -0.6
COL4A5-210ENST00000515658 PTGDRQ13258 359 aa11.32□□□□□ -0.6
COL4A5-210ENST00000515658 GRIN2CQ14957 1233 aa11.32□□□□□ -0.6
COL4A5-210ENST00000515658 BRDTQ58F21 947 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms