RNA–Protein interactions for RNA: ENST00000515594.5

PHF3-212, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 3,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-212ENST00000515594 TPTE2Q6XPS3 522 aa14.19□□□□□ -0.14
PHF3-212ENST00000515594 IFT20Q8IY31 132 aa14.19□□□□□ -0.14
PHF3-212ENST00000515594 EFCC1Q9HA90 598 aa14.19□□□□□ -0.14
PHF3-212ENST00000515594 GDF3Q9NR23 364 aa14.19□□□□□ -0.14
PHF3-212ENST00000515594 RTCBQ9Y3I0 505 aaKnown RBP14.19□□□□□ -0.14
PHF3-212ENST00000515594 TNRC6CQ9HCJ0 1690 aaKnown RBP14.19□□□□□ -0.14
PHF3-212ENST00000515594 PVALEFA0A1B0GWK0 134 aa14.19□□□□□ -0.14
PHF3-212ENST00000515594 TMCO5BA8MYB1 307 aa14.19□□□□□ -0.14
PHF3-212ENST00000515594 TMOD1P28289 359 aa14.19□□□□□ -0.14
PHF3-212ENST00000515594 RFC4P35249 363 aa14.19□□□□□ -0.14
PHF3-212ENST00000515594 FXR2P51116 673 aaKnown RBP eCLIP14.19□□□□□ -0.141e-15■■■□□ 14.9
PHF3-212ENST00000515594 RHBDL3P58872 404 aa14.19□□□□□ -0.14
PHF3-212ENST00000515594 NAB2Q15742 525 aa14.19□□□□□ -0.14
PHF3-212ENST00000515594 ZNF571Q7Z3V5 609 aaPredicted RBP14.19□□□□□ -0.14
PHF3-212ENST00000515594 GPBP1Q86WP2 473 aa14.19□□□□□ -0.14
PHF3-212ENST00000515594 ADGRF4Q8IZF3 695 aa14.19□□□□□ -0.14
PHF3-212ENST00000515594 ARHGEF1Q92888 912 aaKnown RBP14.19□□□□□ -0.14
PHF3-212ENST00000515594 CAVIN3Q969G5 261 aa14.19□□□□□ -0.14
PHF3-212ENST00000515594 CELF4Q9BZC1 486 aaKnown RBP14.19□□□□□ -0.14
PHF3-212ENST00000515594 CEP72Q9P209 647 aa14.19□□□□□ -0.14
PHF3-212ENST00000515594 STK17AQ9UEE5 414 aa14.19□□□□□ -0.14
PHF3-212ENST00000515594 SERPING1P05155 500 aa14.18□□□□□ -0.14
PHF3-212ENST00000515594 NR1D1P20393 614 aa14.18□□□□□ -0.14
PHF3-212ENST00000515594 INPP5BP32019 993 aa14.18□□□□□ -0.14
PHF3-212ENST00000515594 EPS15P42566 896 aa14.18□□□□□ -0.14
PHF3-212ENST00000515594 SPRED3Q2MJR0 410 aa14.18□□□□□ -0.14
PHF3-212ENST00000515594 JMJD4Q9H9V9 463 aa14.18□□□□□ -0.14
PHF3-212ENST00000515594 SFI1A8K8P3 1242 aa14.18□□□□□ -0.14
PHF3-212ENST00000515594 RSPH10B2B2RC85 870 aa14.18□□□□□ -0.14
PHF3-212ENST00000515594 RSPH10BP0C881 870 aa14.18□□□□□ -0.14
PHF3-212ENST00000515594 KCNH2Q12809 1159 aa14.18□□□□□ -0.14
PHF3-212ENST00000515594 ADAM9Q13443 819 aa14.18□□□□□ -0.14
PHF3-212ENST00000515594 SLC18A3Q16572 532 aa14.18□□□□□ -0.14
PHF3-212ENST00000515594 MEI1Q5TIA1 1274 aa14.18□□□□□ -0.14
PHF3-212ENST00000515594 TCERG1LQ5VWI1 586 aa14.18□□□□□ -0.14
PHF3-212ENST00000515594 PCDHA12Q9UN75 941 aa14.18□□□□□ -0.14
PHF3-212ENST00000515594 COL14A1Q05707 1796 aaKnown RBP14.18□□□□□ -0.14
PHF3-212ENST00000515594 MPHOSPH10O00566 681 aaKnown RBP14.18□□□□□ -0.14
PHF3-212ENST00000515594 KRT18P05783 430 aaKnown RBP14.18□□□□□ -0.14
PHF3-212ENST00000515594 POLD1P28340 1107 aa14.18□□□□□ -0.14
PHF3-212ENST00000515594 TMEM119Q4V9L6 283 aa14.18□□□□□ -0.14
PHF3-212ENST00000515594 RNF187Q5TA31 235 aaPredicted RBP14.18□□□□□ -0.14
PHF3-212ENST00000515594 RBM46Q8TBY0 533 aaKnown RBP14.18□□□□□ -0.14
PHF3-212ENST00000515594 RIOX1Q9H6W3 641 aa14.18□□□□□ -0.14
PHF3-212ENST00000515594 CD209Q9NNX6 404 aa14.18□□□□□ -0.14
PHF3-212ENST00000515594 DDX4Q9NQI0 724 aaKnown RBP14.18□□□□□ -0.14
PHF3-212ENST00000515594 STRCQ7RTU9 1775 aa14.17□□□□□ -0.14
PHF3-212ENST00000515594 SSU72P8A0A1W2PR75 194 aa14.17□□□□□ -0.14
PHF3-212ENST00000515594 RIMBP2O15034 1052 aa14.17□□□□□ -0.14
PHF3-212ENST00000515594 CLIC2O15247 247 aa14.17□□□□□ -0.14
PHF3-212ENST00000515594 ATP2C2O75185 946 aa14.17□□□□□ -0.14
PHF3-212ENST00000515594 MED24O75448 989 aa14.17□□□□□ -0.14
PHF3-212ENST00000515594 NR2F2P24468 414 aa14.17□□□□□ -0.14
PHF3-212ENST00000515594 CASP4P49662 377 aa14.17□□□□□ -0.14
PHF3-212ENST00000515594 CYP4A11Q02928 519 aa14.17□□□□□ -0.14
PHF3-212ENST00000515594 PABPC4Q13310 644 aaKnown RBP eCLIP14.17□□□□□ -0.14
PHF3-212ENST00000515594 UAP1Q16222 522 aaPredicted RBP14.17□□□□□ -0.14
PHF3-212ENST00000515594 TRIM59Q8IWR1 403 aa14.17□□□□□ -0.14
PHF3-212ENST00000515594 AMACRQ9UHK6 382 aa14.17□□□□□ -0.14
PHF3-212ENST00000515594 NARFQ9UHQ1 456 aa14.17□□□□□ -0.14
PHF3-212ENST00000515594 E7EVH7 732 aa14.17□□□□□ -0.14
PHF3-212ENST00000515594 PLA2G4BP0C869 781 aa14.17□□□□□ -0.14
PHF3-212ENST00000515594 ECHS1P30084 290 aa14.17□□□□□ -0.14
PHF3-212ENST00000515594 HNRNPH1P31943 449 aaKnown RBP14.17□□□□□ -0.14
PHF3-212ENST00000515594 ITIH3Q06033 890 aa14.17□□□□□ -0.14
PHF3-212ENST00000515594 PAK2Q13177 524 aa14.17□□□□□ -0.14
PHF3-212ENST00000515594 ASIC2Q16515 512 aa14.17□□□□□ -0.14
PHF3-212ENST00000515594 ALS2CLQ60I27 953 aa14.17□□□□□ -0.14
PHF3-212ENST00000515594 KSR1Q8IVT5 923 aa14.17□□□□□ -0.14
PHF3-212ENST00000515594 USP38Q8NB14 1042 aa14.17□□□□□ -0.14
PHF3-212ENST00000515594 EMILIN3Q9NT22 766 aa14.17□□□□□ -0.14
PHF3-212ENST00000515594 MTMR4Q9NYA4 1195 aa14.17□□□□□ -0.14
PHF3-212ENST00000515594 NR2E1Q9Y466 385 aa14.17□□□□□ -0.14
PHF3-212ENST00000515594 MKRN4PQ13434 485 aaPredicted RBP14.16□□□□□ -0.14
PHF3-212ENST00000515594 ARSHQ5FYA8 562 aa14.16□□□□□ -0.14
PHF3-212ENST00000515594 DHX37Q8IY37 1157 aaKnown RBP14.16□□□□□ -0.14
PHF3-212ENST00000515594 P2RX7Q99572 595 aaKnown RBP14.16□□□□□ -0.14
PHF3-212ENST00000515594 LZTS2Q9BRK4 669 aa14.16□□□□□ -0.14
PHF3-212ENST00000515594 GANQ9H2C0 597 aa14.16□□□□□ -0.14
PHF3-212ENST00000515594 DPH5Q9H2P9 285 aa14.16□□□□□ -0.14
PHF3-212ENST00000515594 SMCHD1A6NHR9 2005 aa14.16□□□□□ -0.14
PHF3-212ENST00000515594 MAST2Q6P0Q8 1798 aa14.16□□□□□ -0.14
PHF3-212ENST00000515594 MYBP10242 640 aa14.16□□□□□ -0.14
PHF3-212ENST00000515594 SCNN1DP51172 638 aa14.16□□□□□ -0.14
PHF3-212ENST00000515594 CACNB3P54284 484 aa14.16□□□□□ -0.14
PHF3-212ENST00000515594 PPP4CP60510 307 aa14.16□□□□□ -0.14
PHF3-212ENST00000515594 IFT88Q13099 833 aa14.16□□□□□ -0.14
PHF3-212ENST00000515594 SPAG5Q96R06 1193 aa14.16□□□□□ -0.14
PHF3-212ENST00000515594 NYXQ9GZU5 481 aa14.16□□□□□ -0.14
PHF3-212ENST00000515594 PCDHA2Q9Y5H9 948 aa14.16□□□□□ -0.14
PHF3-212ENST00000515594 RBAK-RBAKDNI3L0D1 243 aa14.16□□□□□ -0.14
PHF3-212ENST00000515594 DAPK3O43293 454 aa14.16□□□□□ -0.14
PHF3-212ENST00000515594 FGFR1OPO95684 399 aaKnown RBP14.16□□□□□ -0.14
PHF3-212ENST00000515594 CYP11B2P19099 503 aa14.16□□□□□ -0.14
PHF3-212ENST00000515594 HSD17B3P37058 310 aa14.16□□□□□ -0.14
PHF3-212ENST00000515594 SKOR1P84550 965 aa14.16□□□□□ -0.14
PHF3-212ENST00000515594 COBLL1Q53SF7 1204 aa14.16□□□□□ -0.14
PHF3-212ENST00000515594 ZNF473Q8WTR7 871 aaKnown RBP14.16□□□□□ -0.14
PHF3-212ENST00000515594 KCTD10Q9H3F6 313 aa14.16□□□□□ -0.14
PHF3-212ENST00000515594 CHORDC1Q9UHD1 332 aaPredicted RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms