RNA–Protein interactions for RNA: ENST00000514654.5

ATP2C1-222, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best)

Gene ATP2C1, Length 4,730 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-222ENST00000514654 FERP16591 822 aa6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 KRT15P19012 456 aa6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 OSBPP22059 807 aa6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 CTNNA1P35221 906 aaKnown RBP6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 IREB2P48200 963 aaKnown RBP6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 ATP1A2P50993 1020 aa6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 RCAN1P53805 252 aa6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 CLEC17AQ6ZS10 378 aa6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 RETREG2Q8NC44 543 aa6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 ZNF653Q96CK0 615 aa6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 FBXO2Q9UK22 296 aaPredicted RBP6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 SSX2IPQ9Y2D8 614 aa6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 PTPN22Q9Y2R2 807 aa6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 PLEKHG2Q9H7P9 1386 aa6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 IQGAP1P46940 1657 aa6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 PXDNQ92626 1479 aa6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 PABPN1LA6NDY0 278 aaKnown RBP6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 MYO1FO00160 1098 aa6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 MFAP3LO75121 409 aa6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 RASA1P20936 1047 aa6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 KIF11P52732 1056 aa6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 PSMD2Q13200 908 aa6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 BRD3Q15059 726 aa6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 PPP2R5AQ15172 486 aa6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 ARMC9Q7Z3E5 817 aa6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 SRGAP1Q7Z6B7 1085 aa6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 GIMAP7Q8NHV1 300 aa6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 SREK1Q8WXA9 508 aaKnown RBP6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 RPGRIP1Q96KN7 1286 aa6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 PREX1Q8TCU6 1659 aa6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 THAP12O43422 761 aa6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 PSAPP07602 524 aa6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 YWHAEP62258 255 aaKnown RBP6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 ATP2C1P98194 919 aaPredicted RBP6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 LRRC63Q05C16 580 aa6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 PADI6Q6TGC4 694 aa6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 CTAGE3PQ8IX95 158 aa6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 THNSL1Q8IYQ7 743 aa6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 ANKRD42Q8N9B4 389 aa6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 RAD54LQ92698 747 aa6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 DPF2Q92785 391 aa6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 CDHR1Q96JP9 859 aa6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 ZNF512BQ96KM6 892 aaPredicted RBP6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 FAM49AQ9H0Q0 323 aaPredicted RBP6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 RAB20Q9NX57 234 aa6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 RGL1Q9NZL6 768 aa6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 HESX1Q9UBX0 185 aa6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 HPS5Q9UPZ3 1129 aa6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 K7ERI5 159 aa6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 SNX16P57768 344 aa6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 GRIN1Q05586 938 aa6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 C2orf54Q08AI8 447 aa6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 COASYQ13057 564 aa6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 SCARA5Q6ZMJ2 495 aa6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 RUFY4Q6ZNE9 571 aa6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 C3orf67Q6ZVT6 689 aa6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 DHX40Q8IX18 779 aaKnown RBP6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 C7orf31Q8N865 590 aa6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 RAB17Q9H0T7 212 aa6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 TMEM206Q9H813 350 aa6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 RNF181Q9P0P0 153 aa6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 PARP2Q9UGN5 583 aa6.72□□□□□ -1.33
ATP2C1-222ENST00000514654 MYO3BQ8WXR4 1341 aa6.71□□□□□ -1.33
ATP2C1-222ENST00000514654 USP27XA6NNY8 438 aa6.71□□□□□ -1.33
ATP2C1-222ENST00000514654 CAPN9O14815 690 aa6.71□□□□□ -1.33
ATP2C1-222ENST00000514654 SLC16A4O15374 487 aa6.71□□□□□ -1.33
ATP2C1-222ENST00000514654 STAM2O75886 525 aa6.71□□□□□ -1.33
ATP2C1-222ENST00000514654 NDUFB10O96000 172 aa6.71□□□□□ -1.33
ATP2C1-222ENST00000514654 LMNB1P20700 586 aa6.71□□□□□ -1.33
ATP2C1-222ENST00000514654 HMGCS2P54868 508 aa6.71□□□□□ -1.33
ATP2C1-222ENST00000514654 SNX1Q13596 522 aa6.71□□□□□ -1.33
ATP2C1-222ENST00000514654 KRT81Q14533 505 aa6.71□□□□□ -1.33
ATP2C1-222ENST00000514654 SPOUT1Q5T280 376 aaKnown RBP6.71□□□□□ -1.33
ATP2C1-222ENST00000514654 DENND2CQ68D51 928 aa6.71□□□□□ -1.33
ATP2C1-222ENST00000514654 KCTD16Q68DU8 428 aa6.71□□□□□ -1.33
ATP2C1-222ENST00000514654 SARM1Q6SZW1 724 aa6.71□□□□□ -1.33
ATP2C1-222ENST00000514654 RSAD2Q8WXG1 361 aa6.71□□□□□ -1.33
ATP2C1-222ENST00000514654 MAGOHBQ96A72 148 aaKnown RBP6.71□□□□□ -1.33
ATP2C1-222ENST00000514654 OTUD5Q96G74 571 aa6.71□□□□□ -1.33
ATP2C1-222ENST00000514654 ZNF148Q9UQR1 794 aa6.71□□□□□ -1.33
ATP2C1-222ENST00000514654 BZW2Q9Y6E2 419 aaKnown RBP6.71□□□□□ -1.33
ATP2C1-222ENST00000514654 KDM6AO15550 1401 aaPredicted RBP6.71□□□□□ -1.33
ATP2C1-222ENST00000514654 GCLMP48507 274 aa6.71□□□□□ -1.34
ATP2C1-222ENST00000514654 ZNF543Q08ER8 600 aa6.71□□□□□ -1.34
ATP2C1-222ENST00000514654 TFDP1Q14186 410 aa6.71□□□□□ -1.34
ATP2C1-222ENST00000514654 R3HDM1Q15032 1099 aaKnown RBP6.71□□□□□ -1.34
ATP2C1-222ENST00000514654 ZNF394Q53GI3 561 aa6.71□□□□□ -1.34
ATP2C1-222ENST00000514654 C6orf163Q5TEZ5 329 aa6.71□□□□□ -1.34
ATP2C1-222ENST00000514654 STRIP1Q5VSL9 837 aa6.71□□□□□ -1.34
ATP2C1-222ENST00000514654 LDHDQ86WU2 507 aa6.71□□□□□ -1.34
ATP2C1-222ENST00000514654 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.71□□□□□ -1.34
ATP2C1-222ENST00000514654 PRPF38AQ8NAV1 312 aaKnown RBP6.71□□□□□ -1.34
ATP2C1-222ENST00000514654 NLRP7Q8WX94 980 aa6.71□□□□□ -1.34
ATP2C1-222ENST00000514654 PHF20Q9BVI0 1012 aa6.71□□□□□ -1.34
ATP2C1-222ENST00000514654 PDE11AQ9HCR9 933 aa6.71□□□□□ -1.34
ATP2C1-222ENST00000514654 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.71□□□□□ -1.34
ATP2C1-222ENST00000514654 PCDHA13Q9Y5I0 950 aa6.71□□□□□ -1.34
ATP2C1-222ENST00000514654 FRMPD1Q5SYB0 1578 aa6.71□□□□□ -1.34
ATP2C1-222ENST00000514654 PXDNLA1KZ92 1463 aa6.71□□□□□ -1.34
ATP2C1-222ENST00000514654 NPHP3-ACAD11A0A0J9YXS1 232 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms