RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 PTPRSQ13332 1948 aa11.97□□□□□ -0.49
HMGXB3-205ENST00000514469 GSTTP1A0A1W2PQM5 241 aa11.96□□□□□ -0.49
HMGXB3-205ENST00000514469 ESYT2A0FGR8 921 aa11.96□□□□□ -0.49
HMGXB3-205ENST00000514469 RSPH10B2B2RC85 870 aa11.96□□□□□ -0.49
HMGXB3-205ENST00000514469 EFCAB14O75071 495 aa11.96□□□□□ -0.49
HMGXB3-205ENST00000514469 RSPH10BP0C881 870 aa11.96□□□□□ -0.49
HMGXB3-205ENST00000514469 GNAT1P11488 350 aa11.96□□□□□ -0.49
HMGXB3-205ENST00000514469 SCG2P13521 617 aa11.96□□□□□ -0.49
HMGXB3-205ENST00000514469 PSMA5P28066 241 aa11.96□□□□□ -0.49
HMGXB3-205ENST00000514469 SREBF1P36956 1147 aa11.96□□□□□ -0.49
HMGXB3-205ENST00000514469 THPOP40225 353 aa11.96□□□□□ -0.49
HMGXB3-205ENST00000514469 KCNJ6P48051 423 aa11.96□□□□□ -0.49
HMGXB3-205ENST00000514469 EVCP57679 992 aa11.96□□□□□ -0.49
HMGXB3-205ENST00000514469 MKRN4PQ13434 485 aaPredicted RBP11.96□□□□□ -0.49
HMGXB3-205ENST00000514469 ADGRE1Q14246 886 aa11.96□□□□□ -0.49
HMGXB3-205ENST00000514469 USP38Q8NB14 1042 aa11.96□□□□□ -0.49
HMGXB3-205ENST00000514469 LMBR1Q8WVP7 490 aa11.96□□□□□ -0.49
HMGXB3-205ENST00000514469 SEPT1Q8WYJ6 367 aa11.96□□□□□ -0.49
HMGXB3-205ENST00000514469 MXRA8Q9BRK3 442 aa11.96□□□□□ -0.49
HMGXB3-205ENST00000514469 KCNH7Q9NS40 1196 aa11.96□□□□□ -0.49
HMGXB3-205ENST00000514469 SETD4Q9NVD3 440 aa11.96□□□□□ -0.49
HMGXB3-205ENST00000514469 TMEM260Q9NX78 707 aa11.96□□□□□ -0.49
HMGXB3-205ENST00000514469 PKD2L1Q9P0L9 805 aa11.96□□□□□ -0.49
HMGXB3-205ENST00000514469 REV3LO60673 3130 aa11.95□□□□□ -0.5
HMGXB3-205ENST00000514469 NFASCO94856 1347 aa11.95□□□□□ -0.5
HMGXB3-205ENST00000514469 NRCAMQ92823 1304 aa11.95□□□□□ -0.5
HMGXB3-205ENST00000514469 ABHD14A-ACY1A0A1B0GW23 586 aa11.95□□□□□ -0.5
HMGXB3-205ENST00000514469 DLL1O00548 723 aa11.95□□□□□ -0.5
HMGXB3-205ENST00000514469 LGR5O75473 907 aa11.95□□□□□ -0.5
HMGXB3-205ENST00000514469 ARHGEF15O94989 841 aa11.95□□□□□ -0.5
HMGXB3-205ENST00000514469 DEFB103AP81534 67 aa11.95□□□□□ -0.5
HMGXB3-205ENST00000514469 NTRK3Q16288 839 aa11.95□□□□□ -0.5
HMGXB3-205ENST00000514469 PKN1Q16512 942 aa11.95□□□□□ -0.5
HMGXB3-205ENST00000514469 CEP55Q53EZ4 464 aa11.95□□□□□ -0.5
HMGXB3-205ENST00000514469 CYP2W1Q8TAV3 490 aa11.95□□□□□ -0.5
HMGXB3-205ENST00000514469 CRYGNQ8WXF5 182 aa11.95□□□□□ -0.5
HMGXB3-205ENST00000514469 ZMYND12Q9H0C1 365 aa11.95□□□□□ -0.5
HMGXB3-205ENST00000514469 JPH1Q9HDC5 661 aaPredicted RBP11.95□□□□□ -0.5
HMGXB3-205ENST00000514469 SLC9A2Q9UBY0 812 aa11.95□□□□□ -0.5
HMGXB3-205ENST00000514469 VCANP13611 3396 aa11.95□□□□□ -0.5
HMGXB3-205ENST00000514469 RBAK-RBAKDNI3L0D1 243 aa11.94□□□□□ -0.5
HMGXB3-205ENST00000514469 PRPF3O43395 683 aaKnown RBP11.94□□□□□ -0.5
HMGXB3-205ENST00000514469 ARP10275 920 aa11.94□□□□□ -0.5
HMGXB3-205ENST00000514469 ARHGAP4P98171 946 aa11.94□□□□□ -0.5
HMGXB3-205ENST00000514469 ITGB3BPQ13352 177 aaPredicted RBP11.94□□□□□ -0.5
HMGXB3-205ENST00000514469 TOB2Q14106 344 aaPredicted RBP11.94□□□□□ -0.5
HMGXB3-205ENST00000514469 RUFY3Q7L099 469 aa11.94□□□□□ -0.5
HMGXB3-205ENST00000514469 NIPA1Q7RTP0 329 aa11.94□□□□□ -0.5
HMGXB3-205ENST00000514469 RPAINQ86UA6 219 aa11.94□□□□□ -0.5
HMGXB3-205ENST00000514469 CCDC12Q8WUD4 166 aaPredicted RBP11.94□□□□□ -0.5
HMGXB3-205ENST00000514469 PHKBQ93100 1093 aa11.94□□□□□ -0.5
HMGXB3-205ENST00000514469 PCYT2Q99447 389 aa11.94□□□□□ -0.5
HMGXB3-205ENST00000514469 RNF26Q9BY78 433 aaPredicted RBP11.94□□□□□ -0.5
HMGXB3-205ENST00000514469 ZSWIM6Q9HCJ5 1215 aa11.94□□□□□ -0.5
HMGXB3-205ENST00000514469 AGO4Q9HCK5 861 aaKnown RBP11.94□□□□□ -0.5
HMGXB3-205ENST00000514469 ERAP1Q9NZ08 941 aa11.94□□□□□ -0.5
HMGXB3-205ENST00000514469 XIRP2A4UGR9 3374 aa11.94□□□□□ -0.5
HMGXB3-205ENST00000514469 COL4A4P53420 1690 aaPredicted RBP11.94□□□□□ -0.5
HMGXB3-205ENST00000514469 COL4A6Q14031 1691 aa11.94□□□□□ -0.5
HMGXB3-205ENST00000514469 MBLAC1A4D2B0 266 aaPredicted RBP11.93□□□□□ -0.5
HMGXB3-205ENST00000514469 KIF28PB7ZC32 967 aa11.93□□□□□ -0.5
HMGXB3-205ENST00000514469 MEIS1O00470 390 aa11.93□□□□□ -0.5
HMGXB3-205ENST00000514469 ADAMTS3O15072 1205 aa11.93□□□□□ -0.5
HMGXB3-205ENST00000514469 TLL1O43897 1013 aa11.93□□□□□ -0.5
HMGXB3-205ENST00000514469 GJB5O95377 273 aa11.93□□□□□ -0.5
HMGXB3-205ENST00000514469 CYP3A4P08684 503 aa11.93□□□□□ -0.5
HMGXB3-205ENST00000514469 CTSHP09668 335 aa11.93□□□□□ -0.5
HMGXB3-205ENST00000514469 IFNAR1P17181 557 aa11.93□□□□□ -0.5
HMGXB3-205ENST00000514469 MARK3P27448 753 aa11.93□□□□□ -0.5
HMGXB3-205ENST00000514469 PDIA3P30101 505 aaKnown RBP11.93□□□□□ -0.5
HMGXB3-205ENST00000514469 TAP1Q03518 808 aa11.93□□□□□ -0.5
HMGXB3-205ENST00000514469 PPFIA1Q13136 1202 aa11.93□□□□□ -0.5
HMGXB3-205ENST00000514469 IKBKEQ14164 716 aa11.93□□□□□ -0.5
HMGXB3-205ENST00000514469 PLEKHG4Q58EX7 1191 aa11.93□□□□□ -0.5
HMGXB3-205ENST00000514469 FAM26DQ5JW98 314 aa11.93□□□□□ -0.5
HMGXB3-205ENST00000514469 JAKMIP3Q5VZ66 844 aa11.93□□□□□ -0.5
HMGXB3-205ENST00000514469 MCTP2Q6DN12 878 aa11.93□□□□□ -0.5
HMGXB3-205ENST00000514469 TAF2Q6P1X5 1199 aa11.93□□□□□ -0.5
HMGXB3-205ENST00000514469 RUFY4Q6ZNE9 571 aa11.93□□□□□ -0.5
HMGXB3-205ENST00000514469 TMCO2Q7Z6W1 182 aaPredicted RBP11.93□□□□□ -0.5
HMGXB3-205ENST00000514469 REXO1Q8N1G1 1221 aaKnown RBP11.93□□□□□ -0.5
HMGXB3-205ENST00000514469 DBF4BQ8NFT6 615 aa11.93□□□□□ -0.5
HMGXB3-205ENST00000514469 SDF4Q9BRK5 362 aa11.93□□□□□ -0.5
HMGXB3-205ENST00000514469 TM6SF1Q9BZW5 370 aa11.93□□□□□ -0.5
HMGXB3-205ENST00000514469 SMARCAD1Q9H4L7 1026 aa11.93□□□□□ -0.5
HMGXB3-205ENST00000514469 C6orf50Q9HD87 102 aa11.93□□□□□ -0.5
HMGXB3-205ENST00000514469 TET1Q8NFU7 2136 aa11.93□□□□□ -0.5
HMGXB3-205ENST00000514469 SIP14410 1827 aa11.93□□□□□ -0.5
HMGXB3-205ENST00000514469 IGLV3-22A0A075B6J6 115 aa11.92□□□□□ -0.5
HMGXB3-205ENST00000514469 LCHNA4D1U4 455 aa11.92□□□□□ -0.5
HMGXB3-205ENST00000514469 EPOPA6NHQ4 379 aa11.92□□□□□ -0.5
HMGXB3-205ENST00000514469 FAM86B1E9PN63 330 aa11.92□□□□□ -0.5
HMGXB3-205ENST00000514469 FAM86B2P0C5J1 330 aa11.92□□□□□ -0.5
HMGXB3-205ENST00000514469 ACTR2P61160 394 aa11.92□□□□□ -0.5
HMGXB3-205ENST00000514469 MGAT3Q09327 533 aa11.92□□□□□ -0.5
HMGXB3-205ENST00000514469 GRIK4Q16099 956 aa11.92□□□□□ -0.5
HMGXB3-205ENST00000514469 MARCH8Q5T0T0 291 aa11.92□□□□□ -0.5
HMGXB3-205ENST00000514469 ERICH6BQ5W0A0 696 aa11.92□□□□□ -0.5
HMGXB3-205ENST00000514469 CCDC148Q8NFR7 591 aa11.92□□□□□ -0.5
HMGXB3-205ENST00000514469 GLG1Q92896 1179 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms