RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 GSTTP1A0A1W2PQM5 241 aa9.42□□□□□ -0.9
CCL28-204ENST00000514421 TLR3O15455 904 aaKnown RBP9.42□□□□□ -0.9
CCL28-204ENST00000514421 PQBP1O60828 265 aaKnown RBP9.42□□□□□ -0.9
CCL28-204ENST00000514421 MMP1P03956 469 aa9.42□□□□□ -0.9
CCL28-204ENST00000514421 SUPT20HL2P0C7V6 817 aa9.42□□□□□ -0.9
CCL28-204ENST00000514421 CYP3A7P24462 503 aa9.42□□□□□ -0.9
CCL28-204ENST00000514421 KRT2P35908 639 aa9.42□□□□□ -0.9
CCL28-204ENST00000514421 PSEN2P49810 448 aa9.42□□□□□ -0.9
CCL28-204ENST00000514421 UBE2HP62256 183 aa9.42□□□□□ -0.9
CCL28-204ENST00000514421 SETQ01105 290 aaPredicted RBP9.42□□□□□ -0.9
CCL28-204ENST00000514421 PTPN11Q06124 597 aaPredicted RBP9.42□□□□□ -0.9
CCL28-204ENST00000514421 RESTQ13127 1097 aa9.42□□□□□ -0.9
CCL28-204ENST00000514421 Q4G0T1 1027 aa9.42□□□□□ -0.9
CCL28-204ENST00000514421 PRR16Q569H4 304 aa9.42□□□□□ -0.9
CCL28-204ENST00000514421 L1TD1Q5T7N2 865 aaKnown RBP9.42□□□□□ -0.9
CCL28-204ENST00000514421 PRPF38BQ5VTL8 546 aaKnown RBP9.42□□□□□ -0.9
CCL28-204ENST00000514421 NFRKBQ6P4R8 1299 aa9.42□□□□□ -0.9
CCL28-204ENST00000514421 MOXD1Q6UVY6 613 aa9.42□□□□□ -0.9
CCL28-204ENST00000514421 FBXO18Q8NFZ0 1043 aa9.42□□□□□ -0.9
CCL28-204ENST00000514421 OXER1Q8TDS5 423 aa9.42□□□□□ -0.9
CCL28-204ENST00000514421 C8orf76Q96K31 380 aa9.42□□□□□ -0.9
CCL28-204ENST00000514421 NAP1L4Q99733 375 aaKnown RBP9.42□□□□□ -0.9
CCL28-204ENST00000514421 ZNF577Q9BSK1 485 aa9.42□□□□□ -0.9
CCL28-204ENST00000514421 KATNAL1Q9BW62 490 aa9.42□□□□□ -0.9
CCL28-204ENST00000514421 TBC1D22BQ9NU19 505 aa9.42□□□□□ -0.9
CCL28-204ENST00000514421 TMEM39AQ9NV64 488 aa9.42□□□□□ -0.9
CCL28-204ENST00000514421 PKD2L1Q9P0L9 805 aa9.42□□□□□ -0.9
CCL28-204ENST00000514421 SLC9A2Q9UBY0 812 aa9.42□□□□□ -0.9
CCL28-204ENST00000514421 ZMYND8Q9ULU4 1186 aaPredicted RBP9.42□□□□□ -0.9
CCL28-204ENST00000514421 LCTP09848 1927 aa9.42□□□□□ -0.9
CCL28-204ENST00000514421 BTBD18B2RXH4 712 aa9.41□□□□□ -0.9
CCL28-204ENST00000514421 IPO5O00410 1097 aaKnown RBP9.41□□□□□ -0.9
CCL28-204ENST00000514421 DHX15O43143 795 aaKnown RBP9.41□□□□□ -0.9
CCL28-204ENST00000514421 CLTBP09497 229 aa9.41□□□□□ -0.9
CCL28-204ENST00000514421 CHMP4BP1P59074 171 aa9.41□□□□□ -0.9
CCL28-204ENST00000514421 FAAP100Q0VG06 881 aa9.41□□□□□ -0.9
CCL28-204ENST00000514421 NR5A1Q13285 461 aa9.41□□□□□ -0.9
CCL28-204ENST00000514421 ITGB3BPQ13352 177 aaPredicted RBP9.41□□□□□ -0.9
CCL28-204ENST00000514421 MFSD10Q14728 455 aa9.41□□□□□ -0.9
CCL28-204ENST00000514421 INF2Q27J81 1249 aa9.41□□□□□ -0.9
CCL28-204ENST00000514421 KIAA0753Q2KHM9 967 aa9.41□□□□□ -0.9
CCL28-204ENST00000514421 UTP14CQ5TAP6 766 aaKnown RBP9.41□□□□□ -0.9
CCL28-204ENST00000514421 PPP4R3AQ6IN85 833 aa9.41□□□□□ -0.9
CCL28-204ENST00000514421 PIK3AP1Q6ZUJ8 805 aa9.41□□□□□ -0.9
CCL28-204ENST00000514421 NEK8Q86SG6 692 aa9.41□□□□□ -0.9
CCL28-204ENST00000514421 FAM126BQ8IXS8 530 aa9.41□□□□□ -0.9
CCL28-204ENST00000514421 DIS3L2Q8IYB7 885 aaKnown RBP9.41□□□□□ -0.9
CCL28-204ENST00000514421 CHAMP1Q96JM3 812 aa9.41□□□□□ -0.9
CCL28-204ENST00000514421 MBOAT7Q96N66 472 aa9.41□□□□□ -0.9
CCL28-204ENST00000514421 C16orf70Q9BSU1 422 aa9.41□□□□□ -0.9
CCL28-204ENST00000514421 JPH1Q9HDC5 661 aaPredicted RBP9.41□□□□□ -0.9
CCL28-204ENST00000514421 VPS37CA5D8V6 355 aaPredicted RBP9.4□□□□□ -0.9
CCL28-204ENST00000514421 TRIM43BA6NCK2 446 aa9.4□□□□□ -0.9
CCL28-204ENST00000514421 GOLGA6L3A6NEY3 463 aa9.4□□□□□ -0.9
CCL28-204ENST00000514421 H3BRB1 525 aa9.4□□□□□ -0.9
CCL28-204ENST00000514421 HAS3O00219 553 aa9.4□□□□□ -0.9
CCL28-204ENST00000514421 KIAA0355O15063 1070 aa9.4□□□□□ -0.9
CCL28-204ENST00000514421 MSH4O15457 936 aa9.4□□□□□ -0.9
CCL28-204ENST00000514421 ATG7O95352 703 aa9.4□□□□□ -0.9
CCL28-204ENST00000514421 CD4P01730 458 aa9.4□□□□□ -0.9
CCL28-204ENST00000514421 LGALS2P05162 132 aa9.4□□□□□ -0.9
CCL28-204ENST00000514421 SYN1P17600 705 aa9.4□□□□□ -0.9
CCL28-204ENST00000514421 MRE11P49959 708 aa9.4□□□□□ -0.9
CCL28-204ENST00000514421 FOSBP53539 338 aa9.4□□□□□ -0.9
CCL28-204ENST00000514421 ACTR2P61160 394 aa9.4□□□□□ -0.9
CCL28-204ENST00000514421 KRT85P78386 507 aa9.4□□□□□ -0.9
CCL28-204ENST00000514421 GUCY1B3Q02153 619 aa9.4□□□□□ -0.9
CCL28-204ENST00000514421 SP4Q02446 784 aa9.4□□□□□ -0.9
CCL28-204ENST00000514421 DNM1Q05193 864 aaKnown RBP9.4□□□□□ -0.9
CCL28-204ENST00000514421 LETM2Q2VYF4 491 aa9.4□□□□□ -0.9
CCL28-204ENST00000514421 ZSCAN23Q3MJ62 389 aa9.4□□□□□ -0.9
CCL28-204ENST00000514421 FAM47CQ5HY64 1035 aa9.4□□□□□ -0.9
CCL28-204ENST00000514421 EARS2Q5JPH6 523 aaKnown RBP9.4□□□□□ -0.9
CCL28-204ENST00000514421 FOXD4L5Q5VV16 416 aaPredicted RBP9.4□□□□□ -0.9
CCL28-204ENST00000514421 SH3RF1Q7Z6J0 888 aa9.4□□□□□ -0.9
CCL28-204ENST00000514421 SESTD1Q86VW0 696 aa9.4□□□□□ -0.9
CCL28-204ENST00000514421 C7orf31Q8N865 590 aa9.4□□□□□ -0.9
CCL28-204ENST00000514421 FOXD4L4Q8WXT5 416 aaPredicted RBP9.4□□□□□ -0.9
CCL28-204ENST00000514421 TNFRSF25Q93038 417 aa9.4□□□□□ -0.9
CCL28-204ENST00000514421 LENG9Q96B70 501 aa9.4□□□□□ -0.9
CCL28-204ENST00000514421 TRIM43Q96BQ3 446 aaPredicted RBP9.4□□□□□ -0.9
CCL28-204ENST00000514421 RIT2Q99578 217 aa9.4□□□□□ -0.9
CCL28-204ENST00000514421 SCAND2PQ9GZW5 306 aaPredicted RBP9.4□□□□□ -0.9
CCL28-204ENST00000514421 TRPV6Q9H1D0 765 aa9.4□□□□□ -0.9
CCL28-204ENST00000514421 FOXP1Q9H334 677 aaPredicted RBP9.4□□□□□ -0.9
CCL28-204ENST00000514421 SMARCAD1Q9H4L7 1026 aa9.4□□□□□ -0.9
CCL28-204ENST00000514421 TUT1Q9H6E5 874 aaKnown RBP9.4□□□□□ -0.9
CCL28-204ENST00000514421 PRDM5Q9NQX1 630 aaPredicted RBP9.4□□□□□ -0.9
CCL28-204ENST00000514421 PDLIM7Q9NR12 457 aa9.4□□□□□ -0.9
CCL28-204ENST00000514421 TELO2Q9Y4R8 837 aa9.4□□□□□ -0.9
CCL28-204ENST00000514421 CCNT1O60563 726 aaKnown RBP9.39□□□□□ -0.91
CCL28-204ENST00000514421 LGR5O75473 907 aa9.39□□□□□ -0.91
CCL28-204ENST00000514421 TDP2O95551 362 aa9.39□□□□□ -0.91
CCL28-204ENST00000514421 F2P00734 622 aa9.39□□□□□ -0.91
CCL28-204ENST00000514421 TIMP1P01033 207 aa9.39□□□□□ -0.91
CCL28-204ENST00000514421 ZNF286BP0CG31 522 aa9.39□□□□□ -0.91
CCL28-204ENST00000514421 RAG1P15918 1043 aa9.39□□□□□ -0.91
CCL28-204ENST00000514421 GCFC2P16383 781 aaKnown RBP9.39□□□□□ -0.91
CCL28-204ENST00000514421 TCF7P36402 384 aaPredicted RBP9.39□□□□□ -0.91
CCL28-204ENST00000514421 STAT5BP51692 787 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms