RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 SP2Q02086 613 aa9.31□□□□□ -0.92
NEDD4-210ENST00000513957 SEMA3FQ13275 785 aa9.31□□□□□ -0.92
NEDD4-210ENST00000513957 TMEM63BQ5T3F8 832 aa9.31□□□□□ -0.92
NEDD4-210ENST00000513957 JAKMIP3Q5VZ66 844 aa9.31□□□□□ -0.92
NEDD4-210ENST00000513957 FAM126BQ8IXS8 530 aa9.31□□□□□ -0.92
NEDD4-210ENST00000513957 COPS5Q92905 334 aa9.31□□□□□ -0.92
NEDD4-210ENST00000513957 TNPO1Q92973 898 aaKnown RBP9.31□□□□□ -0.92
NEDD4-210ENST00000513957 VTI1AQ96AJ9 217 aa9.31□□□□□ -0.92
NEDD4-210ENST00000513957 SDF4Q9BRK5 362 aa9.31□□□□□ -0.92
NEDD4-210ENST00000513957 JPH1Q9HDC5 661 aaPredicted RBP9.31□□□□□ -0.92
NEDD4-210ENST00000513957 PDLIM7Q9NR12 457 aa9.31□□□□□ -0.92
NEDD4-210ENST00000513957 KCNH7Q9NS40 1196 aa9.31□□□□□ -0.92
NEDD4-210ENST00000513957 RTEL1Q9NZ71 1219 aa9.31□□□□□ -0.92
NEDD4-210ENST00000513957 TCEAL9Q9UHQ7 104 aa9.31□□□□□ -0.92
NEDD4-210ENST00000513957 ZNF215Q9UL58 517 aaPredicted RBP9.31□□□□□ -0.92
NEDD4-210ENST00000513957 CEP290O15078 2479 aa9.31□□□□□ -0.92
NEDD4-210ENST00000513957 EMSYQ7Z589 1322 aa9.31□□□□□ -0.92
NEDD4-210ENST00000513957 IGLV3-22A0A075B6J6 115 aa9.3□□□□□ -0.92
NEDD4-210ENST00000513957 GRXCR2A6NFK2 248 aa9.3□□□□□ -0.92
NEDD4-210ENST00000513957 H0YGN5 161 aa9.3□□□□□ -0.92
NEDD4-210ENST00000513957 HAS3O00219 553 aa9.3□□□□□ -0.92
NEDD4-210ENST00000513957 PQBP1O60828 265 aaKnown RBP9.3□□□□□ -0.92
NEDD4-210ENST00000513957 CD4P01730 458 aa9.3□□□□□ -0.92
NEDD4-210ENST00000513957 MMP1P03956 469 aa9.3□□□□□ -0.92
NEDD4-210ENST00000513957 FDPSP14324 419 aaKnown RBP9.3□□□□□ -0.92
NEDD4-210ENST00000513957 GCFC2P16383 781 aaKnown RBP9.3□□□□□ -0.92
NEDD4-210ENST00000513957 KRT2P35908 639 aa9.3□□□□□ -0.92
NEDD4-210ENST00000513957 SLC26A2P50443 739 aa9.3□□□□□ -0.92
NEDD4-210ENST00000513957 TLE2Q04725 743 aa9.3□□□□□ -0.92
NEDD4-210ENST00000513957 KCNA1Q09470 495 aa9.3□□□□□ -0.92
NEDD4-210ENST00000513957 NONOQ15233 471 aaKnown RBP eCLIP9.3□□□□□ -0.92
NEDD4-210ENST00000513957 NPY5RQ15761 445 aa9.3□□□□□ -0.92
NEDD4-210ENST00000513957 HSDL1Q3SXM5 330 aa9.3□□□□□ -0.92
NEDD4-210ENST00000513957 CYFIP1Q7L576 1253 aa9.3□□□□□ -0.92
NEDD4-210ENST00000513957 NECAB1Q8N987 351 aa9.3□□□□□ -0.92
NEDD4-210ENST00000513957 BANK1Q8NDB2 785 aa9.3□□□□□ -0.92
NEDD4-210ENST00000513957 TBC1D22BQ9NU19 505 aa9.3□□□□□ -0.92
NEDD4-210ENST00000513957 TMEM260Q9NX78 707 aa9.3□□□□□ -0.92
NEDD4-210ENST00000513957 TBX21Q9UL17 535 aa9.3□□□□□ -0.92
NEDD4-210ENST00000513957 TRIP12Q14669 1992 aaPredicted RBP9.3□□□□□ -0.92
NEDD4-210ENST00000513957 CYP3A7-CYP3A51PA0A087WV96 503 aa9.29□□□□□ -0.92
NEDD4-210ENST00000513957 CCDC194A0A1B0GVG4 234 aa9.29□□□□□ -0.92
NEDD4-210ENST00000513957 FAM86B1E9PN63 330 aa9.29□□□□□ -0.92
NEDD4-210ENST00000513957 IPO5O00410 1097 aaKnown RBP9.29□□□□□ -0.92
NEDD4-210ENST00000513957 RPLP2P05387 115 aaKnown RBP9.29□□□□□ -0.92
NEDD4-210ENST00000513957 FAM86B2P0C5J1 330 aa9.29□□□□□ -0.92
NEDD4-210ENST00000513957 CYP3A7P24462 503 aa9.29□□□□□ -0.92
NEDD4-210ENST00000513957 IRX5P78411 483 aaPredicted RBP9.29□□□□□ -0.92
NEDD4-210ENST00000513957 FAAP100Q0VG06 881 aa9.29□□□□□ -0.92
NEDD4-210ENST00000513957 ST3GAL1Q11201 340 aa9.29□□□□□ -0.92
NEDD4-210ENST00000513957 SAFBQ15424 915 aaKnown RBP eCLIP9.29□□□□□ -0.92
NEDD4-210ENST00000513957 Q4G0T1 1027 aa9.29□□□□□ -0.92
NEDD4-210ENST00000513957 PPP4R3AQ6IN85 833 aa9.29□□□□□ -0.92
NEDD4-210ENST00000513957 PLA2G4DQ86XP0 818 aa9.29□□□□□ -0.92
NEDD4-210ENST00000513957 CCDC83Q8IWF9 413 aa9.29□□□□□ -0.92
NEDD4-210ENST00000513957 SMAP1Q8IYB5 467 aaPredicted RBP9.29□□□□□ -0.92
NEDD4-210ENST00000513957 CCDC155Q8N6L0 562 aa9.29□□□□□ -0.92
NEDD4-210ENST00000513957 FAM184AQ8NB25 1140 aa9.29□□□□□ -0.92
NEDD4-210ENST00000513957 OXER1Q8TDS5 423 aa9.29□□□□□ -0.92
NEDD4-210ENST00000513957 TBCKQ8TEA7 893 aa9.29□□□□□ -0.92
NEDD4-210ENST00000513957 SEPT1Q8WYJ6 367 aa9.29□□□□□ -0.92
NEDD4-210ENST00000513957 PGBD1Q96JS3 809 aa9.29□□□□□ -0.92
NEDD4-210ENST00000513957 RIT2Q99578 217 aa9.29□□□□□ -0.92
NEDD4-210ENST00000513957 GPR20Q99678 358 aa9.29□□□□□ -0.92
NEDD4-210ENST00000513957 GDF15Q99988 308 aa9.29□□□□□ -0.92
NEDD4-210ENST00000513957 LBHD1Q9BQE6 289 aaPredicted RBP9.29□□□□□ -0.92
NEDD4-210ENST00000513957 C16orf70Q9BSU1 422 aa9.29□□□□□ -0.92
NEDD4-210ENST00000513957 AGO4Q9HCK5 861 aaKnown RBP9.29□□□□□ -0.92
NEDD4-210ENST00000513957 TMEM39AQ9NV64 488 aa9.29□□□□□ -0.92
NEDD4-210ENST00000513957 SLC9A2Q9UBY0 812 aa9.29□□□□□ -0.92
NEDD4-210ENST00000513957 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.29□□□□□ -0.92
NEDD4-210ENST00000513957 LOXHD1Q8IVV2 1947 aa9.29□□□□□ -0.92
NEDD4-210ENST00000513957 GRIN2DO15399 1336 aa9.29□□□□□ -0.92
NEDD4-210ENST00000513957 H3BRB1 525 aa9.28□□□□□ -0.92
NEDD4-210ENST00000513957 JAK2O60674 1132 aa9.28□□□□□ -0.92
NEDD4-210ENST00000513957 PPFIA3O75145 1194 aa9.28□□□□□ -0.92
NEDD4-210ENST00000513957 PARNO95453 639 aaKnown RBP9.28□□□□□ -0.92
NEDD4-210ENST00000513957 TIMP1P01033 207 aa9.28□□□□□ -0.92
NEDD4-210ENST00000513957 LGALS2P05162 132 aa9.28□□□□□ -0.92
NEDD4-210ENST00000513957 GNAT1P11488 350 aa9.28□□□□□ -0.92
NEDD4-210ENST00000513957 RAG1P15918 1043 aa9.28□□□□□ -0.92
NEDD4-210ENST00000513957 CD44P16070 742 aaKnown RBP9.28□□□□□ -0.92
NEDD4-210ENST00000513957 PTGS1P23219 599 aa9.28□□□□□ -0.92
NEDD4-210ENST00000513957 HOXC8P31273 242 aa9.28□□□□□ -0.92
NEDD4-210ENST00000513957 CLCN1P35523 988 aa9.28□□□□□ -0.92
NEDD4-210ENST00000513957 PSEN2P49810 448 aa9.28□□□□□ -0.92
NEDD4-210ENST00000513957 KRT76Q01546 638 aa9.28□□□□□ -0.92
NEDD4-210ENST00000513957 RBL2Q08999 1139 aa9.28□□□□□ -0.92
NEDD4-210ENST00000513957 ORC2Q13416 577 aaPredicted RBP9.28□□□□□ -0.92
NEDD4-210ENST00000513957 NBPF20Q3BBV1 942 aa9.28□□□□□ -0.92
NEDD4-210ENST00000513957 ZNF746Q6NUN9 644 aaPredicted RBP9.28□□□□□ -0.92
NEDD4-210ENST00000513957 NEK8Q86SG6 692 aa9.28□□□□□ -0.92
NEDD4-210ENST00000513957 C7orf31Q8N865 590 aa9.28□□□□□ -0.92
NEDD4-210ENST00000513957 RDM1Q8NG50 284 aa9.28□□□□□ -0.92
NEDD4-210ENST00000513957 CAGE1Q8TC20 777 aa9.28□□□□□ -0.92
NEDD4-210ENST00000513957 RASGRP4Q8TDF6 673 aa9.28□□□□□ -0.92
NEDD4-210ENST00000513957 KAT2BQ92831 832 aa9.28□□□□□ -0.92
NEDD4-210ENST00000513957 LENG9Q96B70 501 aa9.28□□□□□ -0.92
NEDD4-210ENST00000513957 TMX3Q96JJ7 454 aa9.28□□□□□ -0.92
NEDD4-210ENST00000513957 C8orf76Q96K31 380 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms