RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 PLVAPQ9BX97 442 aa13.09□□□□□ -0.31
RNF4-218ENST00000513284 DCTPP1Q9H773 170 aa13.09□□□□□ -0.31
RNF4-218ENST00000513284 RWDD3Q9Y3V2 267 aa13.09□□□□□ -0.31
RNF4-218ENST00000513284 MRPL42Q9Y6G3 142 aaKnown RBP13.09□□□□□ -0.31
RNF4-218ENST00000513284 ABCB11O95342 1321 aa13.09□□□□□ -0.31
RNF4-218ENST00000513284 TTC3P53804 2025 aa13.08□□□□□ -0.31
RNF4-218ENST00000513284 UBA1P22314 1058 aaKnown RBP13.08□□□□□ -0.32
RNF4-218ENST00000513284 BTG3Q14201 252 aaPredicted RBP13.08□□□□□ -0.32
RNF4-218ENST00000513284 PTPN21Q16825 1174 aa13.08□□□□□ -0.32
RNF4-218ENST00000513284 KLHL23Q8NBE8 558 aa13.08□□□□□ -0.32
RNF4-218ENST00000513284 OTUD7AQ8TE49 926 aaPredicted RBP13.08□□□□□ -0.32
RNF4-218ENST00000513284 LINC01599Q8WXQ3 324 aa13.08□□□□□ -0.32
RNF4-218ENST00000513284 PDCD2LQ9BRP1 358 aa13.08□□□□□ -0.32
RNF4-218ENST00000513284 PER2O15055 1255 aa13.07□□□□□ -0.32
RNF4-218ENST00000513284 LGALS2P05162 132 aa13.07□□□□□ -0.32
RNF4-218ENST00000513284 ARP10275 920 aa13.07□□□□□ -0.32
RNF4-218ENST00000513284 HSPD1P10809 573 aaKnown RBP13.07□□□□□ -0.32
RNF4-218ENST00000513284 GHRP10912 638 aa13.07□□□□□ -0.32
RNF4-218ENST00000513284 MYCLP12524 364 aaPredicted RBP13.07□□□□□ -0.32
RNF4-218ENST00000513284 ID4P47928 161 aa13.07□□□□□ -0.32
RNF4-218ENST00000513284 HSD17B4P51659 736 aa13.07□□□□□ -0.32
RNF4-218ENST00000513284 NUBP1P53384 320 aa13.07□□□□□ -0.32
RNF4-218ENST00000513284 GHRHRQ02643 423 aa13.07□□□□□ -0.32
RNF4-218ENST00000513284 MGAT3Q09327 533 aa13.07□□□□□ -0.32
RNF4-218ENST00000513284 LPIN1Q14693 890 aa13.07□□□□□ -0.32
RNF4-218ENST00000513284 QRICH1Q2TAL8 776 aa13.07□□□□□ -0.32
RNF4-218ENST00000513284 STOX1Q6ZVD7 989 aa13.07□□□□□ -0.32
RNF4-218ENST00000513284 MCF2L2Q86YR7 1114 aa13.07□□□□□ -0.32
RNF4-218ENST00000513284 TMEM105Q8N8V8 129 aa13.07□□□□□ -0.32
RNF4-218ENST00000513284 POF1BQ8WVV4 589 aa13.07□□□□□ -0.32
RNF4-218ENST00000513284 S1PR5Q9H228 398 aa13.07□□□□□ -0.32
RNF4-218ENST00000513284 JMJD4Q9H9V9 463 aa13.07□□□□□ -0.32
RNF4-218ENST00000513284 CFBP00751 764 aa13.06□□□□□ -0.32
RNF4-218ENST00000513284 TGFB3P10600 412 aa13.06□□□□□ -0.32
RNF4-218ENST00000513284 ATF7P17544 494 aaPredicted RBP13.06□□□□□ -0.32
RNF4-218ENST00000513284 NAALADL2Q58DX5 795 aa13.06□□□□□ -0.32
RNF4-218ENST00000513284 GPATCH4Q5T3I0 446 aaKnown RBP13.06□□□□□ -0.32
RNF4-218ENST00000513284 KCNV1Q6PIU1 500 aa13.06□□□□□ -0.32
RNF4-218ENST00000513284 RUFY4Q6ZNE9 571 aa13.06□□□□□ -0.32
RNF4-218ENST00000513284 ZKSCAN3Q9BRR0 538 aa13.06□□□□□ -0.32
RNF4-218ENST00000513284 TOMM22Q9NS69 142 aa13.06□□□□□ -0.32
RNF4-218ENST00000513284 MRPL11Q9Y3B7 192 aaKnown RBP13.06□□□□□ -0.32
RNF4-218ENST00000513284 DNAH14Q0VDD8 3507 aa13.06□□□□□ -0.32
RNF4-218ENST00000513284 ZNF292O60281 2723 aa13.05□□□□□ -0.32
RNF4-218ENST00000513284 PPP1R11O60927 126 aaPredicted RBP13.05□□□□□ -0.32
RNF4-218ENST00000513284 KCNC3Q14003 757 aa13.05□□□□□ -0.32
RNF4-218ENST00000513284 PGM5Q15124 567 aa13.05□□□□□ -0.32
RNF4-218ENST00000513284 FRMD5Q7Z6J6 570 aa13.05□□□□□ -0.32
RNF4-218ENST00000513284 TRIM50Q86XT4 487 aa13.05□□□□□ -0.32
RNF4-218ENST00000513284 LMBR1Q8WVP7 490 aa13.05□□□□□ -0.32
RNF4-218ENST00000513284 GPATCH3Q96I76 525 aa13.05□□□□□ -0.32
RNF4-218ENST00000513284 SMOC2Q9H3U7 446 aa13.05□□□□□ -0.32
RNF4-218ENST00000513284 AGO3Q9H9G7 860 aaKnown RBP13.05□□□□□ -0.32
RNF4-218ENST00000513284 MLXIPQ9HAP2 919 aa13.05□□□□□ -0.32
RNF4-218ENST00000513284 VAT1LQ9HCJ6 419 aa13.05□□□□□ -0.32
RNF4-218ENST00000513284 FRYLO94915 3013 aa13.05□□□□□ -0.32
RNF4-218ENST00000513284 MYO10Q9HD67 2058 aa13.04□□□□□ -0.32
RNF4-218ENST00000513284 GVINP1Q7Z2Y8 2422 aa13.04□□□□□ -0.32
RNF4-218ENST00000513284 HOXA13P31271 388 aaPredicted RBP13.04□□□□□ -0.32
RNF4-218ENST00000513284 GATMP50440 423 aa13.04□□□□□ -0.32
RNF4-218ENST00000513284 ERVFC1P60507 584 aa13.04□□□□□ -0.32
RNF4-218ENST00000513284 HAND2P61296 217 aa13.04□□□□□ -0.32
RNF4-218ENST00000513284 SEMA3FQ13275 785 aa13.04□□□□□ -0.32
RNF4-218ENST00000513284 FBXO47Q5MNV8 452 aa13.04□□□□□ -0.32
RNF4-218ENST00000513284 C20orf194Q5TEA3 1177 aa13.04□□□□□ -0.32
RNF4-218ENST00000513284 CMTR2Q8IYT2 770 aaKnown RBP13.04□□□□□ -0.32
RNF4-218ENST00000513284 ADSSL1Q8N142 457 aa13.04□□□□□ -0.32
RNF4-218ENST00000513284 GPR20Q99678 358 aa13.04□□□□□ -0.32
RNF4-218ENST00000513284 USP26Q9BXU7 913 aa13.04□□□□□ -0.32
RNF4-218ENST00000513284 TLE6Q9H808 572 aa13.04□□□□□ -0.32
RNF4-218ENST00000513284 KIAA1671Q9BY89 1806 aa13.04□□□□□ -0.32
RNF4-218ENST00000513284 MED19A0JLT2 244 aaPredicted RBP13.03□□□□□ -0.32
RNF4-218ENST00000513284 PPFIA3O75145 1194 aa13.03□□□□□ -0.32
RNF4-218ENST00000513284 KDM4AO75164 1064 aa13.03□□□□□ -0.32
RNF4-218ENST00000513284 BRD1O95696 1058 aa13.03□□□□□ -0.32
RNF4-218ENST00000513284 GNAT1P11488 350 aa13.03□□□□□ -0.32
RNF4-218ENST00000513284 MRPS9P82933 396 aaKnown RBP13.03□□□□□ -0.32
RNF4-218ENST00000513284 ARHGAP4P98171 946 aa13.03□□□□□ -0.32
RNF4-218ENST00000513284 SYCE2Q6PIF2 218 aa13.03□□□□□ -0.32
RNF4-218ENST00000513284 TMEM184AQ6ZMB5 413 aa13.03□□□□□ -0.32
RNF4-218ENST00000513284 DGKHQ86XP1 1220 aa13.03□□□□□ -0.32
RNF4-218ENST00000513284 TBC1D10CQ8IV04 446 aa13.03□□□□□ -0.32
RNF4-218ENST00000513284 KREMEN2Q8NCW0 462 aa13.03□□□□□ -0.32
RNF4-218ENST00000513284 PPP2R3CQ969Q6 453 aa13.03□□□□□ -0.32
RNF4-218ENST00000513284 CDH22Q9UJ99 828 aa13.03□□□□□ -0.32
RNF4-218ENST00000513284 TTC41PQ6P2S7 1318 aa13.03□□□□□ -0.32
RNF4-218ENST00000513284 PLXNA4Q9HCM2 1894 aa13.03□□□□□ -0.32
RNF4-218ENST00000513284 KRT37O76014 449 aa13.02□□□□□ -0.33
RNF4-218ENST00000513284 DUSP6Q16828 381 aa13.02□□□□□ -0.33
RNF4-218ENST00000513284 SLC35G1Q2M3R5 365 aa13.02□□□□□ -0.33
RNF4-218ENST00000513284 PAN2Q504Q3 1202 aaKnown RBP13.02□□□□□ -0.33
RNF4-218ENST00000513284 MARCH8Q5T0T0 291 aa13.02□□□□□ -0.33
RNF4-218ENST00000513284 CYFIP1Q7L576 1253 aa13.02□□□□□ -0.33
RNF4-218ENST00000513284 STAG2Q8N3U4 1231 aa13.02□□□□□ -0.33
RNF4-218ENST00000513284 PNMA1Q8ND90 353 aa13.02□□□□□ -0.33
RNF4-218ENST00000513284 MTMR8Q96EF0 704 aa13.02□□□□□ -0.33
RNF4-218ENST00000513284 FAM227BQ96M60 508 aa13.02□□□□□ -0.33
RNF4-218ENST00000513284 RCAN3Q9UKA8 241 aa13.02□□□□□ -0.33
RNF4-218ENST00000513284 SPATA31C2B4DYI2 1134 aa13.01□□□□□ -0.33
RNF4-218ENST00000513284 SP100P23497 879 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms