RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 CALCOCO1Q9P1Z2 691 aa14.32□□□□□ -0.12
PCDHA4-202ENST00000512229 MAD2L2Q9UI95 211 aa14.32□□□□□ -0.12
PCDHA4-202ENST00000512229 SALL1Q9NSC2 1324 aa14.32□□□□□ -0.12
PCDHA4-202ENST00000512229 ESYT2A0FGR8 921 aa14.32□□□□□ -0.12
PCDHA4-202ENST00000512229 CAPN2P17655 700 aa14.32□□□□□ -0.12
PCDHA4-202ENST00000512229 PEX3P56589 373 aa14.32□□□□□ -0.12
PCDHA4-202ENST00000512229 CYP27A1Q02318 531 aa14.32□□□□□ -0.12
PCDHA4-202ENST00000512229 ALCAMQ13740 583 aa14.32□□□□□ -0.12
PCDHA4-202ENST00000512229 PTPAQ15257 358 aa14.32□□□□□ -0.12
PCDHA4-202ENST00000512229 MICALCLQ6ZW33 695 aa14.32□□□□□ -0.12
PCDHA4-202ENST00000512229 PRMT6Q96LA8 375 aaPredicted RBP14.32□□□□□ -0.12
PCDHA4-202ENST00000512229 MAK16Q9BXY0 300 aaKnown RBP14.32□□□□□ -0.12
PCDHA4-202ENST00000512229 TMEM60Q9H2L4 133 aa14.32□□□□□ -0.12
PCDHA4-202ENST00000512229 RNF181Q9P0P0 153 aa14.32□□□□□ -0.12
PCDHA4-202ENST00000512229 GCNT4Q9P109 453 aa14.32□□□□□ -0.12
PCDHA4-202ENST00000512229 P4HA1P13674 534 aa14.31□□□□□ -0.12
PCDHA4-202ENST00000512229 JAK3P52333 1124 aa14.31□□□□□ -0.12
PCDHA4-202ENST00000512229 GRIN1Q05586 938 aa14.31□□□□□ -0.12
PCDHA4-202ENST00000512229 LPAR1Q92633 364 aa14.31□□□□□ -0.12
PCDHA4-202ENST00000512229 DYDC2Q96IM9 177 aa14.31□□□□□ -0.12
PCDHA4-202ENST00000512229 A0A1W2PRG0 241 aa14.31□□□□□ -0.12
PCDHA4-202ENST00000512229 M0QZ92 97 aa14.31□□□□□ -0.12
PCDHA4-202ENST00000512229 TEX33O43247 280 aa14.31□□□□□ -0.12
PCDHA4-202ENST00000512229 TNNC2P02585 160 aa14.31□□□□□ -0.12
PCDHA4-202ENST00000512229 EIF4A3P38919 411 aaKnown RBP14.31□□□□□ -0.12
PCDHA4-202ENST00000512229 PDE6CP51160 858 aa14.31□□□□□ -0.12
PCDHA4-202ENST00000512229 SNX16P57768 344 aa14.31□□□□□ -0.12
PCDHA4-202ENST00000512229 KRT76Q01546 638 aa14.31□□□□□ -0.12
PCDHA4-202ENST00000512229 DDR1Q08345 913 aa14.31□□□□□ -0.12
PCDHA4-202ENST00000512229 PADI6Q6TGC4 694 aa14.31□□□□□ -0.12
PCDHA4-202ENST00000512229 NEK9Q8TD19 979 aa14.31□□□□□ -0.12
PCDHA4-202ENST00000512229 UBLCP1Q8WVY7 318 aaPredicted RBP14.31□□□□□ -0.12
PCDHA4-202ENST00000512229 ENC1O14682 589 aa14.31□□□□□ -0.12
PCDHA4-202ENST00000512229 P4HBP07237 508 aaKnown RBP14.31□□□□□ -0.12
PCDHA4-202ENST00000512229 MXI1P50539 228 aa14.31□□□□□ -0.12
PCDHA4-202ENST00000512229 TFDP1Q14186 410 aa14.31□□□□□ -0.12
PCDHA4-202ENST00000512229 STXBP2Q15833 593 aa14.31□□□□□ -0.12
PCDHA4-202ENST00000512229 CLUL1Q15846 466 aa14.31□□□□□ -0.12
PCDHA4-202ENST00000512229 STMN4Q9H169 189 aaPredicted RBP14.31□□□□□ -0.12
PCDHA4-202ENST00000512229 PODXL2Q9NZ53 605 aa14.31□□□□□ -0.12
PCDHA4-202ENST00000512229 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.31□□□□□ -0.12
PCDHA4-202ENST00000512229 FAM205AQ6ZU69 1335 aa14.31□□□□□ -0.12
PCDHA4-202ENST00000512229 LMNB1P20700 586 aa14.3□□□□□ -0.12
PCDHA4-202ENST00000512229 MFAP3P55082 362 aa14.3□□□□□ -0.12
PCDHA4-202ENST00000512229 PTK2Q05397 1052 aa14.3□□□□□ -0.12
PCDHA4-202ENST00000512229 EHHADHQ08426 723 aa14.3□□□□□ -0.12
PCDHA4-202ENST00000512229 PTPROQ16827 1216 aa14.3□□□□□ -0.12
PCDHA4-202ENST00000512229 DNAJC21Q5F1R6 531 aaKnown RBP14.3□□□□□ -0.12
PCDHA4-202ENST00000512229 FAM133AQ8N9E0 248 aa14.3□□□□□ -0.12
PCDHA4-202ENST00000512229 BANK1Q8NDB2 785 aa14.3□□□□□ -0.12
PCDHA4-202ENST00000512229 AGBL3Q8NEM8 1001 aa14.3□□□□□ -0.12
PCDHA4-202ENST00000512229 CEP63Q96MT8 703 aa14.3□□□□□ -0.12
PCDHA4-202ENST00000512229 TMEM39BQ9GZU3 492 aa14.3□□□□□ -0.12
PCDHA4-202ENST00000512229 NHEJ1Q9H9Q4 299 aaPredicted RBP14.3□□□□□ -0.12
PCDHA4-202ENST00000512229 SPTLC3Q9NUV7 552 aa14.3□□□□□ -0.12
PCDHA4-202ENST00000512229 PLSCR1O15162 318 aa14.3□□□□□ -0.12
PCDHA4-202ENST00000512229 LRRN2O75325 713 aa14.3□□□□□ -0.12
PCDHA4-202ENST00000512229 QARSP47897 775 aaKnown RBP14.3□□□□□ -0.12
PCDHA4-202ENST00000512229 BPIFB4P59827 614 aa14.3□□□□□ -0.12
PCDHA4-202ENST00000512229 PAK2Q13177 524 aa14.3□□□□□ -0.12
PCDHA4-202ENST00000512229 ATRIPQ8WXE1 791 aa14.3□□□□□ -0.12
PCDHA4-202ENST00000512229 LRRC45Q96CN5 670 aa14.3□□□□□ -0.12
PCDHA4-202ENST00000512229 SMIM23A6NLE4 172 aa14.3□□□□□ -0.12
PCDHA4-202ENST00000512229 K7ERI5 159 aa14.3□□□□□ -0.12
PCDHA4-202ENST00000512229 FCER1AP12319 257 aa14.3□□□□□ -0.12
PCDHA4-202ENST00000512229 ABCD1P33897 745 aa14.3□□□□□ -0.12
PCDHA4-202ENST00000512229 HMGCS2P54868 508 aa14.3□□□□□ -0.12
PCDHA4-202ENST00000512229 BRD3Q15059 726 aa14.3□□□□□ -0.12
PCDHA4-202ENST00000512229 RNF187Q5TA31 235 aaPredicted RBP14.3□□□□□ -0.12
PCDHA4-202ENST00000512229 SPON1Q9HCB6 807 aa14.3□□□□□ -0.12
PCDHA4-202ENST00000512229 ST7Q9NRC1 585 aa14.3□□□□□ -0.12
PCDHA4-202ENST00000512229 SND1Q7KZF4 910 aaKnown RBP eCLIP14.3□□□□□ -0.12
PCDHA4-202ENST00000512229 CCDC105Q8IYK2 499 aa14.3□□□□□ -0.12
PCDHA4-202ENST00000512229 RPAP3Q9H6T3 665 aaPredicted RBP14.3□□□□□ -0.12
PCDHA4-202ENST00000512229 ADAMTS1Q9UHI8 967 aa14.3□□□□□ -0.12
PCDHA4-202ENST00000512229 PHLPP2Q6ZVD8 1323 aa14.29□□□□□ -0.12
PCDHA4-202ENST00000512229 WDR46O15213 610 aaKnown RBP14.29□□□□□ -0.12
PCDHA4-202ENST00000512229 SRGAP1Q7Z6B7 1085 aa14.29□□□□□ -0.12
PCDHA4-202ENST00000512229 MCPH1Q8NEM0 835 aa14.29□□□□□ -0.12
PCDHA4-202ENST00000512229 EIF2AK1Q9BQI3 630 aaKnown RBP14.29□□□□□ -0.12
PCDHA4-202ENST00000512229 PNMA3Q9UL41 463 aa14.29□□□□□ -0.12
PCDHA4-202ENST00000512229 AKAP12Q02952 1782 aa14.29□□□□□ -0.12
PCDHA4-202ENST00000512229 DPYDQ12882 1025 aa14.29□□□□□ -0.12
PCDHA4-202ENST00000512229 KNOP1Q1ED39 458 aaKnown RBP14.29□□□□□ -0.12
PCDHA4-202ENST00000512229 LONRF2Q1L5Z9 754 aa14.29□□□□□ -0.12
PCDHA4-202ENST00000512229 FAM47CQ5HY64 1035 aa14.29□□□□□ -0.12
PCDHA4-202ENST00000512229 EXOC8Q8IYI6 725 aa14.29□□□□□ -0.12
PCDHA4-202ENST00000512229 FAM163AQ96GL9 167 aaPredicted RBP14.29□□□□□ -0.12
PCDHA4-202ENST00000512229 ASIC3Q9UHC3 531 aa14.29□□□□□ -0.12
PCDHA4-202ENST00000512229 DDX41Q9UJV9 622 aaKnown RBP14.29□□□□□ -0.12
PCDHA4-202ENST00000512229 NAALADL2Q58DX5 795 aa14.29□□□□□ -0.12
PCDHA4-202ENST00000512229 RABGGTAQ92696 567 aa14.29□□□□□ -0.12
PCDHA4-202ENST00000512229 SEL1LQ9UBV2 794 aa14.29□□□□□ -0.12
PCDHA4-202ENST00000512229 FEZ2Q9UHY8 353 aaPredicted RBP14.29□□□□□ -0.12
PCDHA4-202ENST00000512229 NR3C1P04150 777 aa14.28□□□□□ -0.12
PCDHA4-202ENST00000512229 KIF11P52732 1056 aa14.28□□□□□ -0.12
PCDHA4-202ENST00000512229 MTMR2Q13614 643 aa14.28□□□□□ -0.12
PCDHA4-202ENST00000512229 HACE1Q8IYU2 909 aa14.28□□□□□ -0.12
PCDHA4-202ENST00000512229 MYOZ2Q9NPC6 264 aa14.28□□□□□ -0.12
PCDHA4-202ENST00000512229 LRRC4BQ9NT99 713 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms