RNA–Protein interactions for RNA: ENST00000509692.5

SKP2-205, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2

Gene SKP2, Length 1,646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-205ENST00000509692 MAFGO15525 162 aa18.56■□□□□ 0.56
SKP2-205ENST00000509692 CCNT1O60563 726 aaKnown RBP18.56■□□□□ 0.56
SKP2-205ENST00000509692 HOXD8P13378 290 aaPredicted RBP18.56■□□□□ 0.56
SKP2-205ENST00000509692 RAG1P15918 1043 aa18.56■□□□□ 0.56
SKP2-205ENST00000509692 ATP2B1P20020 1258 aa18.56■□□□□ 0.56
SKP2-205ENST00000509692 FXR1P51114 621 aaKnown RBP eCLIP18.56■□□□□ 0.56
SKP2-205ENST00000509692 SETQ01105 290 aaPredicted RBP18.56■□□□□ 0.56
SKP2-205ENST00000509692 PKP1Q13835 747 aa18.56■□□□□ 0.56
SKP2-205ENST00000509692 BRAPQ7Z569 592 aa18.56■□□□□ 0.56
SKP2-205ENST00000509692 MLXIPQ9HAP2 919 aa18.56■□□□□ 0.56
SKP2-205ENST00000509692 TRMT13Q9NUP7 481 aaKnown RBP18.56■□□□□ 0.56
SKP2-205ENST00000509692 TELO2Q9Y4R8 837 aa18.56■□□□□ 0.56
SKP2-205ENST00000509692 ATP9AO75110 1047 aa18.56■□□□□ 0.56
SKP2-205ENST00000509692 TIMP1P01033 207 aa18.56■□□□□ 0.56
SKP2-205ENST00000509692 ZSCAN22P10073 491 aaPredicted RBP18.56■□□□□ 0.56
SKP2-205ENST00000509692 ARP10275 920 aa18.56■□□□□ 0.56
SKP2-205ENST00000509692 GCFC2P16383 781 aaKnown RBP18.56■□□□□ 0.56
SKP2-205ENST00000509692 TRAPPC10P48553 1259 aa18.56■□□□□ 0.56
SKP2-205ENST00000509692 RESTQ13127 1097 aa18.56■□□□□ 0.56
SKP2-205ENST00000509692 Q4G0T1 1027 aa18.56■□□□□ 0.56
SKP2-205ENST00000509692 PPP4R3AQ6IN85 833 aa18.56■□□□□ 0.56
SKP2-205ENST00000509692 CYFIP1Q7L576 1253 aa18.56■□□□□ 0.56
SKP2-205ENST00000509692 MBOAT7Q96N66 472 aa18.56■□□□□ 0.56
SKP2-205ENST00000509692 KCNH7Q9NS40 1196 aa18.56■□□□□ 0.56
SKP2-205ENST00000509692 DDX25Q9UHL0 483 aaKnown RBP18.56■□□□□ 0.56
SKP2-205ENST00000509692 MYH15Q9Y2K3 1946 aa18.55■□□□□ 0.56
SKP2-205ENST00000509692 WNT7AO00755 349 aa18.55■□□□□ 0.56
SKP2-205ENST00000509692 PPFIA4O75335 1185 aa18.55■□□□□ 0.56
SKP2-205ENST00000509692 ZNF286BP0CG31 522 aa18.55■□□□□ 0.56
SKP2-205ENST00000509692 CHMP4BP1P59074 171 aa18.55■□□□□ 0.56
SKP2-205ENST00000509692 NEDD9Q14511 834 aa18.55■□□□□ 0.56
SKP2-205ENST00000509692 FOXD4L5Q5VV16 416 aaPredicted RBP18.55■□□□□ 0.56
SKP2-205ENST00000509692 NFRKBQ6P4R8 1299 aa18.55■□□□□ 0.56
SKP2-205ENST00000509692 METTL7BQ6UX53 244 aa18.55■□□□□ 0.56
SKP2-205ENST00000509692 TDHQ8IZJ6 230 aa18.55■□□□□ 0.56
SKP2-205ENST00000509692 FOXD4L4Q8WXT5 416 aaPredicted RBP18.55■□□□□ 0.56
SKP2-205ENST00000509692 LENG9Q96B70 501 aa18.55■□□□□ 0.56
SKP2-205ENST00000509692 SENP7Q9BQF6 1050 aa18.55■□□□□ 0.56
SKP2-205ENST00000509692 ZSCAN16Q9H4T2 348 aaPredicted RBP18.55■□□□□ 0.56
SKP2-205ENST00000509692 TOB1P50616 345 aaPredicted RBP18.54■□□□□ 0.56
SKP2-205ENST00000509692 RILPL1Q5EBL4 403 aa18.54■□□□□ 0.56
SKP2-205ENST00000509692 FAM47CQ5HY64 1035 aa18.54■□□□□ 0.56
SKP2-205ENST00000509692 TTC38Q5R3I4 469 aa18.54■□□□□ 0.56
SKP2-205ENST00000509692 PPP1R12CQ9BZL4 782 aa18.54■□□□□ 0.56
SKP2-205ENST00000509692 AGO4Q9HCK5 861 aaKnown RBP18.54■□□□□ 0.56
SKP2-205ENST00000509692 PKD2L1Q9P0L9 805 aa18.54■□□□□ 0.56
SKP2-205ENST00000509692 SLC37A4O43826 429 aa18.53■□□□□ 0.56
SKP2-205ENST00000509692 F2P00734 622 aa18.53■□□□□ 0.56
SKP2-205ENST00000509692 KCNA2P16389 499 aa18.53■□□□□ 0.56
SKP2-205ENST00000509692 EPHB4P54760 987 aa18.53■□□□□ 0.56
SKP2-205ENST00000509692 IPO9Q96P70 1041 aaKnown RBP18.53■□□□□ 0.56
SKP2-205ENST00000509692 C16orf70Q9BSU1 422 aa18.53■□□□□ 0.56
SKP2-205ENST00000509692 UMODL1Q5DID0 1318 aa18.53■□□□□ 0.56
SKP2-205ENST00000509692 HAS3O00219 553 aa18.52■□□□□ 0.56
SKP2-205ENST00000509692 BRD1O95696 1058 aa18.52■□□□□ 0.56
SKP2-205ENST00000509692 F13A1P00488 732 aa18.52■□□□□ 0.56
SKP2-205ENST00000509692 CYP2C9P11712 490 aa18.52■□□□□ 0.56
SKP2-205ENST00000509692 CYP2C18P33260 490 aa18.52■□□□□ 0.56
SKP2-205ENST00000509692 MCM7P33993 719 aa18.52■□□□□ 0.56
SKP2-205ENST00000509692 DDIT3P35638 169 aa18.52■□□□□ 0.56
SKP2-205ENST00000509692 PSEN2P49810 448 aa18.52■□□□□ 0.56
SKP2-205ENST00000509692 NBR1Q14596 966 aa18.52■□□□□ 0.56
SKP2-205ENST00000509692 ZNF174Q15697 407 aa18.52■□□□□ 0.56
SKP2-205ENST00000509692 MFSD5Q6N075 450 aa18.52■□□□□ 0.56
SKP2-205ENST00000509692 UIMC1Q96RL1 719 aa18.52■□□□□ 0.56
SKP2-205ENST00000509692 GPR20Q99678 358 aa18.52■□□□□ 0.56
SKP2-205ENST00000509692 ZNF577Q9BSK1 485 aa18.52■□□□□ 0.56
SKP2-205ENST00000509692 TRIP12Q14669 1992 aaPredicted RBP18.52■□□□□ 0.56
SKP2-205ENST00000509692 SOX1O00570 391 aaPredicted RBP18.52■□□□□ 0.55
SKP2-205ENST00000509692 MSH4O15457 936 aa18.52■□□□□ 0.55
SKP2-205ENST00000509692 SP4Q02446 784 aa18.52■□□□□ 0.55
SKP2-205ENST00000509692 PTPN11Q06124 597 aaPredicted RBP18.52■□□□□ 0.55
SKP2-205ENST00000509692 C9orf50Q5SZB4 431 aa18.52■□□□□ 0.55
SKP2-205ENST00000509692 POTEDQ86YR6 584 aa18.52■□□□□ 0.55
SKP2-205ENST00000509692 GIMAP8Q8ND71 665 aaPredicted RBP18.52■□□□□ 0.55
SKP2-205ENST00000509692 NOC4LQ9BVI4 516 aaKnown RBP18.52■□□□□ 0.55
SKP2-205ENST00000509692 HIPK3Q9H422 1215 aa18.52■□□□□ 0.55
SKP2-205ENST00000509692 ZDHHC9Q9Y397 364 aa18.52■□□□□ 0.55
SKP2-205ENST00000509692 PCDHB6Q9Y5E3 794 aa18.52■□□□□ 0.55
SKP2-205ENST00000509692 IPO5O00410 1097 aaKnown RBP18.51■□□□□ 0.55
SKP2-205ENST00000509692 NOP56O00567 594 aaKnown RBP18.51■□□□□ 0.55
SKP2-205ENST00000509692 NEMFO60524 1076 aa18.51■□□□□ 0.55
SKP2-205ENST00000509692 FPGSQ05932 587 aa18.51■□□□□ 0.55
SKP2-205ENST00000509692 ITGB3BPQ13352 177 aaPredicted RBP18.51■□□□□ 0.55
SKP2-205ENST00000509692 ORC2Q13416 577 aaPredicted RBP18.51■□□□□ 0.55
SKP2-205ENST00000509692 MFSD10Q14728 455 aa18.51■□□□□ 0.55
SKP2-205ENST00000509692 SHHQ15465 462 aa18.51■□□□□ 0.55
SKP2-205ENST00000509692 KIAA0753Q2KHM9 967 aa18.51■□□□□ 0.55
SKP2-205ENST00000509692 GDF6Q6KF10 455 aaPredicted RBP18.51■□□□□ 0.55
SKP2-205ENST00000509692 FAM173BQ6P4H8 233 aa18.51■□□□□ 0.55
SKP2-205ENST00000509692 SESTD1Q86VW0 696 aa18.51■□□□□ 0.55
SKP2-205ENST00000509692 ETNPPLQ8TBG4 499 aa18.51■□□□□ 0.55
SKP2-205ENST00000509692 CTAGE1Q96RT6 745 aa18.51■□□□□ 0.55
SKP2-205ENST00000509692 HDAC6Q9UBN7 1215 aa18.51■□□□□ 0.55
SKP2-205ENST00000509692 NFASCO94856 1347 aa18.51■□□□□ 0.55
SKP2-205ENST00000509692 CDH23Q9H251 3354 aa18.5■□□□□ 0.55
SKP2-205ENST00000509692 LGALS2P05162 132 aa18.5■□□□□ 0.55
SKP2-205ENST00000509692 SUPT20HL2P0C7V6 817 aa18.5■□□□□ 0.55
SKP2-205ENST00000509692 SDF4Q9BRK5 362 aa18.5■□□□□ 0.55
SKP2-205ENST00000509692 KATNAL1Q9BW62 490 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms