RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 UIMC1Q96RL1 719 aa9.96□□□□□ -0.82
PDLIM5-213ENST00000509357 SENP7Q9BQF6 1050 aa9.96□□□□□ -0.82
PDLIM5-213ENST00000509357 TUT1Q9H6E5 874 aaKnown RBP9.96□□□□□ -0.82
PDLIM5-213ENST00000509357 C6orf50Q9HD87 102 aa9.96□□□□□ -0.82
PDLIM5-213ENST00000509357 SH3GLB2Q9NR46 395 aa9.96□□□□□ -0.82
PDLIM5-213ENST00000509357 MTMR10Q9NXD2 777 aa9.96□□□□□ -0.82
PDLIM5-213ENST00000509357 GTF2IRD1Q9UHL9 959 aa9.96□□□□□ -0.82
PDLIM5-213ENST00000509357 ZNF215Q9UL58 517 aaPredicted RBP9.96□□□□□ -0.82
PDLIM5-213ENST00000509357 PCDHA4Q9UN74 947 aa9.96□□□□□ -0.82
PDLIM5-213ENST00000509357 SLC4A7Q9Y6M7 1214 aa9.96□□□□□ -0.82
PDLIM5-213ENST00000509357 LTBP2Q14767 1821 aa9.96□□□□□ -0.82
PDLIM5-213ENST00000509357 IGLV3-22A0A075B6J6 115 aa9.95□□□□□ -0.82
PDLIM5-213ENST00000509357 C17orf102A2RUQ5 167 aa9.95□□□□□ -0.82
PDLIM5-213ENST00000509357 GRXCR1A8MXD5 290 aa9.95□□□□□ -0.82
PDLIM5-213ENST00000509357 BTBD18B2RXH4 712 aa9.95□□□□□ -0.82
PDLIM5-213ENST00000509357 FAM86B1E9PN63 330 aa9.95□□□□□ -0.82
PDLIM5-213ENST00000509357 PITPNM1O00562 1244 aa9.95□□□□□ -0.82
PDLIM5-213ENST00000509357 ATP9AO75110 1047 aa9.95□□□□□ -0.82
PDLIM5-213ENST00000509357 MMP1P03956 469 aa9.95□□□□□ -0.82
PDLIM5-213ENST00000509357 LGALS2P05162 132 aa9.95□□□□□ -0.82
PDLIM5-213ENST00000509357 FAM86B2P0C5J1 330 aa9.95□□□□□ -0.82
PDLIM5-213ENST00000509357 IQCF3P0C7M6 154 aa9.95□□□□□ -0.82
PDLIM5-213ENST00000509357 RFC2P35250 354 aa9.95□□□□□ -0.82
PDLIM5-213ENST00000509357 SREBF1P36956 1147 aa9.95□□□□□ -0.82
PDLIM5-213ENST00000509357 AP3B2Q13367 1082 aa9.95□□□□□ -0.82
PDLIM5-213ENST00000509357 CPLX2Q6PUV4 134 aaKnown RBP9.95□□□□□ -0.82
PDLIM5-213ENST00000509357 TRIM22Q8IYM9 498 aa9.95□□□□□ -0.82
PDLIM5-213ENST00000509357 BLIDQ8IZY5 108 aa9.95□□□□□ -0.82
PDLIM5-213ENST00000509357 AFAP1L1Q8TED9 768 aa9.95□□□□□ -0.82
PDLIM5-213ENST00000509357 HERVK_113Q902F9 699 aa9.95□□□□□ -0.82
PDLIM5-213ENST00000509357 GLG1Q92896 1179 aa9.95□□□□□ -0.82
PDLIM5-213ENST00000509357 GJA10Q969M2 543 aa9.95□□□□□ -0.82
PDLIM5-213ENST00000509357 TIFAQ96CG3 184 aa9.95□□□□□ -0.82
PDLIM5-213ENST00000509357 GPR20Q99678 358 aa9.95□□□□□ -0.82
PDLIM5-213ENST00000509357 SEMA6BQ9H3T3 888 aa9.95□□□□□ -0.82
PDLIM5-213ENST00000509357 JADE2Q9NQC1 790 aa9.95□□□□□ -0.82
PDLIM5-213ENST00000509357 MSRAQ9UJ68 235 aa9.95□□□□□ -0.82
PDLIM5-213ENST00000509357 UBIAD1Q9Y5Z9 338 aa9.95□□□□□ -0.82
PDLIM5-213ENST00000509357 SCN10AQ9Y5Y9 1956 aa9.94□□□□□ -0.82
PDLIM5-213ENST00000509357 HAS3O00219 553 aa9.94□□□□□ -0.82
PDLIM5-213ENST00000509357 MAFGO15525 162 aa9.94□□□□□ -0.82
PDLIM5-213ENST00000509357 CDKL5O76039 1030 aa9.94□□□□□ -0.82
PDLIM5-213ENST00000509357 TDP2O95551 362 aa9.94□□□□□ -0.82
PDLIM5-213ENST00000509357 SMIM10L2AP0DMW4 78 aa9.94□□□□□ -0.82
PDLIM5-213ENST00000509357 SMIM10L2BP0DMW5 78 aa9.94□□□□□ -0.82
PDLIM5-213ENST00000509357 ARP10275 920 aa9.94□□□□□ -0.82
PDLIM5-213ENST00000509357 GNAT1P11488 350 aa9.94□□□□□ -0.82
PDLIM5-213ENST00000509357 HOXD8P13378 290 aaPredicted RBP9.94□□□□□ -0.82
PDLIM5-213ENST00000509357 SELPP16109 830 aa9.94□□□□□ -0.82
PDLIM5-213ENST00000509357 DNAJB2P25686 324 aa9.94□□□□□ -0.82
PDLIM5-213ENST00000509357 GNA11P29992 359 aa9.94□□□□□ -0.82
PDLIM5-213ENST00000509357 TCF7P36402 384 aaPredicted RBP9.94□□□□□ -0.82
PDLIM5-213ENST00000509357 THPOP40225 353 aa9.94□□□□□ -0.82
PDLIM5-213ENST00000509357 MCM2P49736 904 aa9.94□□□□□ -0.82
PDLIM5-213ENST00000509357 NLRP5P59047 1200 aa9.94□□□□□ -0.82
PDLIM5-213ENST00000509357 ARHGAP4P98171 946 aa9.94□□□□□ -0.82
PDLIM5-213ENST00000509357 ZNF200P98182 395 aaPredicted RBP9.94□□□□□ -0.82
PDLIM5-213ENST00000509357 PTK7Q13308 1070 aa9.94□□□□□ -0.82
PDLIM5-213ENST00000509357 LRRC8DQ7L1W4 858 aa9.94□□□□□ -0.82
PDLIM5-213ENST00000509357 TEX2Q8IWB9 1127 aa9.94□□□□□ -0.82
PDLIM5-213ENST00000509357 REXO1Q8N1G1 1221 aaKnown RBP9.94□□□□□ -0.82
PDLIM5-213ENST00000509357 FBXO18Q8NFZ0 1043 aa9.94□□□□□ -0.82
PDLIM5-213ENST00000509357 SEPT1Q8WYJ6 367 aa9.94□□□□□ -0.82
PDLIM5-213ENST00000509357 ATP6V0A1Q93050 837 aa9.94□□□□□ -0.82
PDLIM5-213ENST00000509357 MXRA8Q9BRK3 442 aa9.94□□□□□ -0.82
PDLIM5-213ENST00000509357 SDF4Q9BRK5 362 aa9.94□□□□□ -0.82
PDLIM5-213ENST00000509357 C16orf70Q9BSU1 422 aa9.94□□□□□ -0.82
PDLIM5-213ENST00000509357 CXXC1Q9P0U4 656 aaPredicted RBP9.94□□□□□ -0.82
PDLIM5-213ENST00000509357 STXBP5LQ9Y2K9 1186 aa9.94□□□□□ -0.82
PDLIM5-213ENST00000509357 SLC37A4O43826 429 aa9.93□□□□□ -0.82
PDLIM5-213ENST00000509357 CKBP12277 381 aa9.93□□□□□ -0.82
PDLIM5-213ENST00000509357 KCNA2P16389 499 aa9.93□□□□□ -0.82
PDLIM5-213ENST00000509357 ATP2A2P16615 1042 aaKnown RBP9.93□□□□□ -0.82
PDLIM5-213ENST00000509357 ITGB3BPQ13352 177 aaPredicted RBP9.93□□□□□ -0.82
PDLIM5-213ENST00000509357 PKP1Q13835 747 aa9.93□□□□□ -0.82
PDLIM5-213ENST00000509357 NBR1Q14596 966 aa9.93□□□□□ -0.82
PDLIM5-213ENST00000509357 RAB30Q15771 203 aa9.93□□□□□ -0.82
PDLIM5-213ENST00000509357 INF2Q27J81 1249 aa9.93□□□□□ -0.82
PDLIM5-213ENST00000509357 CEP55Q53EZ4 464 aa9.93□□□□□ -0.82
PDLIM5-213ENST00000509357 MCTP2Q6DN12 878 aa9.93□□□□□ -0.82
PDLIM5-213ENST00000509357 TRIM50Q86XT4 487 aa9.93□□□□□ -0.82
PDLIM5-213ENST00000509357 DIS3L2Q8IYB7 885 aaKnown RBP9.93□□□□□ -0.82
PDLIM5-213ENST00000509357 CCDC148Q8NFR7 591 aa9.93□□□□□ -0.82
PDLIM5-213ENST00000509357 BICD2Q8TD16 824 aa9.93□□□□□ -0.82
PDLIM5-213ENST00000509357 TBCKQ8TEA7 893 aa9.93□□□□□ -0.82
PDLIM5-213ENST00000509357 CDX2Q99626 313 aaPredicted RBP9.93□□□□□ -0.82
PDLIM5-213ENST00000509357 PBX4Q9BYU1 374 aa9.93□□□□□ -0.82
PDLIM5-213ENST00000509357 AZI2Q9H6S1 392 aa9.93□□□□□ -0.82
PDLIM5-213ENST00000509357 JPH1Q9HDC5 661 aaPredicted RBP9.93□□□□□ -0.82
PDLIM5-213ENST00000509357 KCNH7Q9NS40 1196 aa9.93□□□□□ -0.82
PDLIM5-213ENST00000509357 SETD4Q9NVD3 440 aa9.93□□□□□ -0.82
PDLIM5-213ENST00000509357 TMEM265A0A087WTH1 108 aa9.92□□□□□ -0.82
PDLIM5-213ENST00000509357 DDX39AO00148 427 aaKnown RBP9.92□□□□□ -0.82
PDLIM5-213ENST00000509357 PARNO95453 639 aaKnown RBP9.92□□□□□ -0.82
PDLIM5-213ENST00000509357 CYP3A4P08684 503 aa9.92□□□□□ -0.82
PDLIM5-213ENST00000509357 MARK3P27448 753 aa9.92□□□□□ -0.82
PDLIM5-213ENST00000509357 CIITAP33076 1130 aa9.92□□□□□ -0.82
PDLIM5-213ENST00000509357 PBX2P40425 430 aa9.92□□□□□ -0.82
PDLIM5-213ENST00000509357 KCNJ6P48051 423 aa9.92□□□□□ -0.82
PDLIM5-213ENST00000509357 TOB1P50616 345 aaPredicted RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms