RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 KLF18A0A0U1RQI7 1052 aa12.53□□□□□ -0.4
RNF4-212ENST00000509258 LINC01553A4QN01 128 aa12.53□□□□□ -0.4
RNF4-212ENST00000509258 STXBP3O00186 592 aa12.53□□□□□ -0.4
RNF4-212ENST00000509258 CALM1P0DP23 149 aa12.53□□□□□ -0.4
RNF4-212ENST00000509258 CALM2P0DP24 149 aa12.53□□□□□ -0.4
RNF4-212ENST00000509258 CALM3P0DP25 149 aa12.53□□□□□ -0.4
RNF4-212ENST00000509258 KCNA2P16389 499 aa12.53□□□□□ -0.4
RNF4-212ENST00000509258 HSPA4P34932 840 aa12.53□□□□□ -0.4
RNF4-212ENST00000509258 ERVK-21P61565 698 aa12.53□□□□□ -0.4
RNF4-212ENST00000509258 SP4Q02446 784 aa12.53□□□□□ -0.4
RNF4-212ENST00000509258 APOBRQ0VD83 1088 aa12.53□□□□□ -0.4
RNF4-212ENST00000509258 RTN1Q16799 776 aa12.53□□□□□ -0.4
RNF4-212ENST00000509258 SERINC5Q86VE9 423 aa12.53□□□□□ -0.4
RNF4-212ENST00000509258 CYP2W1Q8TAV3 490 aa12.53□□□□□ -0.4
RNF4-212ENST00000509258 PSTPIP2Q9H939 334 aa12.53□□□□□ -0.4
RNF4-212ENST00000509258 SUGCTQ9HAC7 445 aa12.53□□□□□ -0.4
RNF4-212ENST00000509258 MLXIPQ9HAP2 919 aa12.53□□□□□ -0.4
RNF4-212ENST00000509258 TMEM260Q9NX78 707 aa12.53□□□□□ -0.4
RNF4-212ENST00000509258 PKD2L1Q9P0L9 805 aa12.53□□□□□ -0.4
RNF4-212ENST00000509258 RAPGEFL1Q9UHV5 662 aa12.53□□□□□ -0.4
RNF4-212ENST00000509258 MTUS1Q9ULD2 1270 aa12.53□□□□□ -0.4
RNF4-212ENST00000509258 INSL6Q9Y581 213 aa12.53□□□□□ -0.4
RNF4-212ENST00000509258 MYO7AQ13402 2215 aa12.52□□□□□ -0.41
RNF4-212ENST00000509258 RSPH10B2B2RC85 870 aa12.52□□□□□ -0.41
RNF4-212ENST00000509258 H3BRB1 525 aa12.52□□□□□ -0.41
RNF4-212ENST00000509258 NOP56O00567 594 aaKnown RBP12.52□□□□□ -0.41
RNF4-212ENST00000509258 TREHO43280 583 aa12.52□□□□□ -0.41
RNF4-212ENST00000509258 ZBTB43O43298 467 aa12.52□□□□□ -0.41
RNF4-212ENST00000509258 FIBPO43427 364 aa12.52□□□□□ -0.41
RNF4-212ENST00000509258 PPFIA3O75145 1194 aa12.52□□□□□ -0.41
RNF4-212ENST00000509258 CAND2O75155 1236 aa12.52□□□□□ -0.41
RNF4-212ENST00000509258 AMHP03971 560 aa12.52□□□□□ -0.41
RNF4-212ENST00000509258 RSPH10BP0C881 870 aa12.52□□□□□ -0.41
RNF4-212ENST00000509258 SMIM10L2AP0DMW4 78 aa12.52□□□□□ -0.41
RNF4-212ENST00000509258 SMIM10L2BP0DMW5 78 aa12.52□□□□□ -0.41
RNF4-212ENST00000509258 ADD1P35611 737 aaKnown RBP12.52□□□□□ -0.41
RNF4-212ENST00000509258 PLA2G5P39877 138 aa12.52□□□□□ -0.41
RNF4-212ENST00000509258 THPOP40225 353 aa12.52□□□□□ -0.41
RNF4-212ENST00000509258 RNF20Q5VTR2 975 aa12.52□□□□□ -0.41
RNF4-212ENST00000509258 METTL7BQ6UX53 244 aa12.52□□□□□ -0.41
RNF4-212ENST00000509258 Q6ZUG5 572 aa12.52□□□□□ -0.41
RNF4-212ENST00000509258 CUL5Q93034 780 aa12.52□□□□□ -0.41
RNF4-212ENST00000509258 JAKMIP1Q96N16 626 aaKnown RBP12.52□□□□□ -0.41
RNF4-212ENST00000509258 TUT1Q9H6E5 874 aaKnown RBP12.52□□□□□ -0.41
RNF4-212ENST00000509258 PCDHA6Q9UN73 950 aa12.52□□□□□ -0.41
RNF4-212ENST00000509258 PCDHA8Q9Y5H6 950 aa12.52□□□□□ -0.41
RNF4-212ENST00000509258 UBIAD1Q9Y5Z9 338 aa12.52□□□□□ -0.41
RNF4-212ENST00000509258 V9GY48 417 aaPredicted RBP12.52□□□□□ -0.41
RNF4-212ENST00000509258 GSTTP1A0A1W2PQM5 241 aa12.51□□□□□ -0.41
RNF4-212ENST00000509258 C17orf102A2RUQ5 167 aa12.51□□□□□ -0.41
RNF4-212ENST00000509258 GOLGA8AA7E2F4 631 aa12.51□□□□□ -0.41
RNF4-212ENST00000509258 GOLGA8BA8MQT2 603 aa12.51□□□□□ -0.41
RNF4-212ENST00000509258 GNAT1P11488 350 aa12.51□□□□□ -0.41
RNF4-212ENST00000509258 MKRN4PQ13434 485 aaPredicted RBP12.51□□□□□ -0.41
RNF4-212ENST00000509258 NEDD9Q14511 834 aa12.51□□□□□ -0.41
RNF4-212ENST00000509258 UTP14CQ5TAP6 766 aaKnown RBP12.51□□□□□ -0.41
RNF4-212ENST00000509258 FAM117BQ6P1L5 589 aa12.51□□□□□ -0.41
RNF4-212ENST00000509258 MYOCDQ8IZQ8 938 aa12.51□□□□□ -0.41
RNF4-212ENST00000509258 ATP6V0A1Q93050 837 aa12.51□□□□□ -0.41
RNF4-212ENST00000509258 ZBTB10Q96DT7 871 aa12.51□□□□□ -0.41
RNF4-212ENST00000509258 RNPEPQ9H4A4 650 aa12.51□□□□□ -0.41
RNF4-212ENST00000509258 SETD4Q9NVD3 440 aa12.51□□□□□ -0.41
RNF4-212ENST00000509258 KIAA1671Q9BY89 1806 aa12.51□□□□□ -0.41
RNF4-212ENST00000509258 ADAM17P78536 824 aa12.5□□□□□ -0.41
RNF4-212ENST00000509258 HTRA4P83105 476 aaPredicted RBP12.5□□□□□ -0.41
RNF4-212ENST00000509258 PKN1Q16512 942 aa12.5□□□□□ -0.41
RNF4-212ENST00000509258 PLEKHG4Q58EX7 1191 aa12.5□□□□□ -0.41
RNF4-212ENST00000509258 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.5□□□□□ -0.41
RNF4-212ENST00000509258 FBXO22Q8NEZ5 403 aa12.5□□□□□ -0.41
RNF4-212ENST00000509258 DBF4BQ8NFT6 615 aa12.5□□□□□ -0.41
RNF4-212ENST00000509258 SP7Q8TDD2 431 aaPredicted RBP12.5□□□□□ -0.41
RNF4-212ENST00000509258 SEPT8Q92599 483 aa12.5□□□□□ -0.41
RNF4-212ENST00000509258 BRF1Q92994 677 aa12.5□□□□□ -0.41
RNF4-212ENST00000509258 FAM122AQ96E09 287 aa12.5□□□□□ -0.41
RNF4-212ENST00000509258 PCYT2Q99447 389 aa12.5□□□□□ -0.41
RNF4-212ENST00000509258 USP26Q9BXU7 913 aa12.5□□□□□ -0.41
RNF4-212ENST00000509258 UBE2ZQ9H832 354 aaPredicted RBP12.5□□□□□ -0.41
RNF4-212ENST00000509258 RIC8AQ9NPQ8 531 aa12.5□□□□□ -0.41
RNF4-212ENST00000509258 ZNF215Q9UL58 517 aaPredicted RBP12.5□□□□□ -0.41
RNF4-212ENST00000509258 HCN4Q9Y3Q4 1203 aa12.5□□□□□ -0.41
RNF4-212ENST00000509258 NID2Q14112 1375 aa12.5□□□□□ -0.41
RNF4-212ENST00000509258 COL4A6Q14031 1691 aa12.49□□□□□ -0.41
RNF4-212ENST00000509258 ARP10275 920 aa12.49□□□□□ -0.41
RNF4-212ENST00000509258 RPS6KB1P23443 525 aa12.49□□□□□ -0.41
RNF4-212ENST00000509258 CLK2P49760 499 aaKnown RBP12.49□□□□□ -0.41
RNF4-212ENST00000509258 NAPAP54920 295 aa12.49□□□□□ -0.41
RNF4-212ENST00000509258 KRT32Q14532 448 aa12.49□□□□□ -0.41
RNF4-212ENST00000509258 PTPROQ16827 1216 aa12.49□□□□□ -0.41
RNF4-212ENST00000509258 XRRA1Q6P2D8 792 aa12.49□□□□□ -0.41
RNF4-212ENST00000509258 RUFY4Q6ZNE9 571 aa12.49□□□□□ -0.41
RNF4-212ENST00000509258 NLRX1Q86UT6 975 aa12.49□□□□□ -0.41
RNF4-212ENST00000509258 GIMAP8Q8ND71 665 aaPredicted RBP12.49□□□□□ -0.41
RNF4-212ENST00000509258 LMBR1Q8WVP7 490 aa12.49□□□□□ -0.41
RNF4-212ENST00000509258 GPRASP2Q96D09 838 aa12.49□□□□□ -0.41
RNF4-212ENST00000509258 SAMD11Q96NU1 681 aa12.49□□□□□ -0.41
RNF4-212ENST00000509258 UIMC1Q96RL1 719 aa12.49□□□□□ -0.41
RNF4-212ENST00000509258 YME1L1Q96TA2 773 aa12.49□□□□□ -0.41
RNF4-212ENST00000509258 SENP7Q9BQF6 1050 aa12.49□□□□□ -0.41
RNF4-212ENST00000509258 LARP6Q9BRS8 491 aaKnown RBP12.49□□□□□ -0.41
RNF4-212ENST00000509258 C17orf80Q9BSJ5 609 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms