RNA–Protein interactions for RNA: ENST00000508659.5

CLDND1-219, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 681 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-219ENST00000508659 JAK2O60674 1132 aa19.25■□□□□ 0.67
CLDND1-219ENST00000508659 SMIM10L2AP0DMW4 78 aa19.25■□□□□ 0.67
CLDND1-219ENST00000508659 SMIM10L2BP0DMW5 78 aa19.25■□□□□ 0.67
CLDND1-219ENST00000508659 CIITAP33076 1130 aa19.25■□□□□ 0.67
CLDND1-219ENST00000508659 EPHB4P54760 987 aa19.25■□□□□ 0.67
CLDND1-219ENST00000508659 ST3GAL1Q11201 340 aa19.25■□□□□ 0.67
CLDND1-219ENST00000508659 NONOQ15233 471 aaKnown RBP eCLIP19.25■□□□□ 0.67
CLDND1-219ENST00000508659 SHHQ15465 462 aa19.25■□□□□ 0.67
CLDND1-219ENST00000508659 KRT25Q7Z3Z0 450 aa19.25■□□□□ 0.67
CLDND1-219ENST00000508659 CCDC83Q8IWF9 413 aa19.25■□□□□ 0.67
CLDND1-219ENST00000508659 GLG1Q92896 1179 aa19.25■□□□□ 0.67
CLDND1-219ENST00000508659 ZSCAN31Q96LW9 406 aaPredicted RBP19.25■□□□□ 0.67
CLDND1-219ENST00000508659 AZI2Q9H6S1 392 aa19.25■□□□□ 0.67
CLDND1-219ENST00000508659 SH2B1Q9NRF2 756 aaPredicted RBP19.25■□□□□ 0.67
CLDND1-219ENST00000508659 CCDC194A0A1B0GVG4 234 aa19.24■□□□□ 0.67
CLDND1-219ENST00000508659 GSTTP1A0A1W2PQM5 241 aa19.24■□□□□ 0.67
CLDND1-219ENST00000508659 M0R2N6 131 aa19.24■□□□□ 0.67
CLDND1-219ENST00000508659 MARK3P27448 753 aa19.24■□□□□ 0.67
CLDND1-219ENST00000508659 USP11P51784 963 aa19.24■□□□□ 0.67
CLDND1-219ENST00000508659 ACTR2P61160 394 aa19.24■□□□□ 0.67
CLDND1-219ENST00000508659 TRIM29Q14134 588 aa19.24■□□□□ 0.67
CLDND1-219ENST00000508659 RETREG2Q8NC44 543 aa19.24■□□□□ 0.67
CLDND1-219ENST00000508659 SCLYQ96I15 445 aa19.24■□□□□ 0.67
CLDND1-219ENST00000508659 IL23AQ9NPF7 189 aa19.24■□□□□ 0.67
CLDND1-219ENST00000508659 GJB4Q9NTQ9 266 aa19.24■□□□□ 0.67
CLDND1-219ENST00000508659 ERAP1Q9NZ08 941 aa19.24■□□□□ 0.67
CLDND1-219ENST00000508659 DOCK5Q9H7D0 1870 aa19.24■□□□□ 0.67
CLDND1-219ENST00000508659 MYH7BA7E2Y1 1941 aa19.23■□□□□ 0.67
CLDND1-219ENST00000508659 SOX1O00570 391 aaPredicted RBP19.23■□□□□ 0.67
CLDND1-219ENST00000508659 FDPSP14324 419 aaKnown RBP19.23■□□□□ 0.67
CLDND1-219ENST00000508659 PTK7Q13308 1070 aa19.23■□□□□ 0.67
CLDND1-219ENST00000508659 TBC1D32Q96NH3 1257 aa19.23■□□□□ 0.67
CLDND1-219ENST00000508659 CTAGE1Q96RT6 745 aa19.23■□□□□ 0.67
CLDND1-219ENST00000508659 SMARCAD1Q9H4L7 1026 aa19.23■□□□□ 0.67
CLDND1-219ENST00000508659 TBC1D22BQ9NU19 505 aa19.23■□□□□ 0.67
CLDND1-219ENST00000508659 TANC1Q9C0D5 1861 aa19.22■□□□□ 0.67
CLDND1-219ENST00000508659 ACRP10323 421 aa19.22■□□□□ 0.67
CLDND1-219ENST00000508659 GNAT1P11488 350 aa19.22■□□□□ 0.67
CLDND1-219ENST00000508659 KRT2P35908 639 aa19.22■□□□□ 0.67
CLDND1-219ENST00000508659 FOSBP53539 338 aa19.22■□□□□ 0.67
CLDND1-219ENST00000508659 ZNF200P98182 395 aaPredicted RBP19.22■□□□□ 0.67
CLDND1-219ENST00000508659 AFAP1L1Q8TED9 768 aa19.22■□□□□ 0.67
CLDND1-219ENST00000508659 ATP6V0A1Q93050 837 aa19.22■□□□□ 0.67
CLDND1-219ENST00000508659 LENG9Q96B70 501 aa19.22■□□□□ 0.67
CLDND1-219ENST00000508659 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.22■□□□□ 0.67
CLDND1-219ENST00000508659 LLPHQ9BRT6 129 aaKnown RBP19.22■□□□□ 0.67
CLDND1-219ENST00000508659 LGR5O75473 907 aa19.21■□□□□ 0.67
CLDND1-219ENST00000508659 PFKMP08237 780 aa19.21■□□□□ 0.67
CLDND1-219ENST00000508659 HOXC8P31273 242 aa19.21■□□□□ 0.67
CLDND1-219ENST00000508659 RFC2P35250 354 aa19.21■□□□□ 0.67
CLDND1-219ENST00000508659 RBL2Q08999 1139 aa19.21■□□□□ 0.67
CLDND1-219ENST00000508659 PPFIA1Q13136 1202 aa19.21■□□□□ 0.67
CLDND1-219ENST00000508659 INF2Q27J81 1249 aa19.21■□□□□ 0.67
CLDND1-219ENST00000508659 PIK3AP1Q6ZUJ8 805 aa19.21■□□□□ 0.67
CLDND1-219ENST00000508659 IL27Q8NEV9 243 aa19.21■□□□□ 0.67
CLDND1-219ENST00000508659 OXER1Q8TDS5 423 aa19.21■□□□□ 0.67
CLDND1-219ENST00000508659 LMBR1Q8WVP7 490 aa19.21■□□□□ 0.67
CLDND1-219ENST00000508659 DHX38Q92620 1227 aaKnown RBP19.21■□□□□ 0.67
CLDND1-219ENST00000508659 LRCH3Q96II8 777 aa19.21■□□□□ 0.67
CLDND1-219ENST00000508659 UIMC1Q96RL1 719 aa19.21■□□□□ 0.67
CLDND1-219ENST00000508659 MTIF3Q9H2K0 278 aaKnown RBP19.21■□□□□ 0.67
CLDND1-219ENST00000508659 SETD4Q9NVD3 440 aa19.21■□□□□ 0.67
CLDND1-219ENST00000508659 NRCAMQ92823 1304 aa19.21■□□□□ 0.67
CLDND1-219ENST00000508659 BACH1O14867 736 aa19.2■□□□□ 0.66
CLDND1-219ENST00000508659 TDP2O95551 362 aa19.2■□□□□ 0.66
CLDND1-219ENST00000508659 CCNE2O96020 404 aa19.2■□□□□ 0.66
CLDND1-219ENST00000508659 IQCF3P0C7M6 154 aa19.2■□□□□ 0.66
CLDND1-219ENST00000508659 SELPP16109 830 aa19.2■□□□□ 0.66
CLDND1-219ENST00000508659 HMGN5P82970 282 aaKnown RBP19.2■□□□□ 0.66
CLDND1-219ENST00000508659 KRT76Q01546 638 aa19.2■□□□□ 0.66
CLDND1-219ENST00000508659 HIC1Q14526 733 aa19.2■□□□□ 0.66
CLDND1-219ENST00000508659 LETM2Q2VYF4 491 aa19.2■□□□□ 0.66
CLDND1-219ENST00000508659 TMEM240Q5SV17 173 aa19.2■□□□□ 0.66
CLDND1-219ENST00000508659 ZNF746Q6NUN9 644 aaPredicted RBP19.2■□□□□ 0.66
CLDND1-219ENST00000508659 MIS18BP1Q6P0N0 1132 aa19.2■□□□□ 0.66
CLDND1-219ENST00000508659 MOXD1Q6UVY6 613 aa19.2■□□□□ 0.66
CLDND1-219ENST00000508659 ZNF365Q70YC5 407 aa19.2■□□□□ 0.66
CLDND1-219ENST00000508659 LRRC8DQ7L1W4 858 aa19.2■□□□□ 0.66
CLDND1-219ENST00000508659 SERINC5Q86VE9 423 aa19.2■□□□□ 0.66
CLDND1-219ENST00000508659 SMAP1Q8IYB5 467 aaPredicted RBP19.2■□□□□ 0.66
CLDND1-219ENST00000508659 RPUSD2Q8IZ73 545 aaKnown RBP19.2■□□□□ 0.66
CLDND1-219ENST00000508659 RNPEPQ9H4A4 650 aa19.2■□□□□ 0.66
CLDND1-219ENST00000508659 TRPC6Q9Y210 931 aa19.2■□□□□ 0.66
CLDND1-219ENST00000508659 MSH4O15457 936 aa19.19■□□□□ 0.66
CLDND1-219ENST00000508659 DHX15O43143 795 aaKnown RBP19.19■□□□□ 0.66
CLDND1-219ENST00000508659 MMP1P03956 469 aa19.19■□□□□ 0.66
CLDND1-219ENST00000508659 CKBP12277 381 aa19.19■□□□□ 0.66
CLDND1-219ENST00000508659 SLC26A2P50443 739 aa19.19■□□□□ 0.66
CLDND1-219ENST00000508659 Q4G0T1 1027 aa19.19■□□□□ 0.66
CLDND1-219ENST00000508659 FAM160B1Q5W0V3 765 aa19.19■□□□□ 0.66
CLDND1-219ENST00000508659 C16orf59Q7L2K0 433 aa19.19■□□□□ 0.66
CLDND1-219ENST00000508659 DEFB128Q7Z7B8 93 aa19.19■□□□□ 0.66
CLDND1-219ENST00000508659 NEK8Q86SG6 692 aa19.19■□□□□ 0.66
CLDND1-219ENST00000508659 PCYT2Q99447 389 aa19.19■□□□□ 0.66
CLDND1-219ENST00000508659 DDX25Q9UHL0 483 aaKnown RBP19.19■□□□□ 0.66
CLDND1-219ENST00000508659 CYP3A7-CYP3A51PA0A087WV96 503 aa19.18■□□□□ 0.66
CLDND1-219ENST00000508659 TREHO43280 583 aa19.18■□□□□ 0.66
CLDND1-219ENST00000508659 GAS7O60861 476 aa19.18■□□□□ 0.66
CLDND1-219ENST00000508659 PARNO95453 639 aaKnown RBP19.18■□□□□ 0.66
CLDND1-219ENST00000508659 GCFC2P16383 781 aaKnown RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms