RNA–Protein interactions for RNA: ENST00000508308.1

HMGN1P16-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 16, humanhuman

BASIC

Gene HMGN1P16, Length 283 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P16-201ENST00000508308 CCND2P30279 289 aa7.44□□□□□ -1.22
HMGN1P16-201ENST00000508308 KCNV1Q6PIU1 500 aa7.44□□□□□ -1.22
HMGN1P16-201ENST00000508308 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.44□□□□□ -1.22
HMGN1P16-201ENST00000508308 CYFIP1Q7L576 1253 aa7.44□□□□□ -1.22
HMGN1P16-201ENST00000508308 CATIPQ7Z7H3 387 aa7.44□□□□□ -1.22
HMGN1P16-201ENST00000508308 RALYLQ86SE5 291 aaKnown RBP7.44□□□□□ -1.22
HMGN1P16-201ENST00000508308 SKAP1Q86WV1 359 aa7.44□□□□□ -1.22
HMGN1P16-201ENST00000508308 TRIM50Q86XT4 487 aa7.44□□□□□ -1.22
HMGN1P16-201ENST00000508308 ZNF654Q8IZM8 581 aa7.44□□□□□ -1.22
HMGN1P16-201ENST00000508308 CMTR1Q8N1G2 835 aaKnown RBP7.44□□□□□ -1.22
HMGN1P16-201ENST00000508308 MICALL1Q8N3F8 863 aa7.44□□□□□ -1.22
HMGN1P16-201ENST00000508308 SRBD1Q8N5C6 995 aaKnown RBP7.44□□□□□ -1.22
HMGN1P16-201ENST00000508308 CCDC155Q8N6L0 562 aa7.44□□□□□ -1.22
HMGN1P16-201ENST00000508308 RUFY2Q8WXA3 655 aa7.44□□□□□ -1.22
HMGN1P16-201ENST00000508308 MAP3K14Q99558 947 aa7.44□□□□□ -1.22
HMGN1P16-201ENST00000508308 GPR20Q99678 358 aa7.44□□□□□ -1.22
HMGN1P16-201ENST00000508308 KATNAL1Q9BW62 490 aa7.44□□□□□ -1.22
HMGN1P16-201ENST00000508308 SPZ1Q9BXG8 430 aa7.44□□□□□ -1.22
HMGN1P16-201ENST00000508308 TUT1Q9H6E5 874 aaKnown RBP7.44□□□□□ -1.22
HMGN1P16-201ENST00000508308 RTEL1Q9NZ71 1219 aa7.44□□□□□ -1.22
HMGN1P16-201ENST00000508308 SIP14410 1827 aa7.43□□□□□ -1.22
HMGN1P16-201ENST00000508308 hCG_1642624A0A1W2PR95 340 aa7.43□□□□□ -1.22
HMGN1P16-201ENST00000508308 SLC27A2O14975 620 aa7.43□□□□□ -1.22
HMGN1P16-201ENST00000508308 PRC1O43663 620 aa7.43□□□□□ -1.22
HMGN1P16-201ENST00000508308 ATP9AO75110 1047 aa7.43□□□□□ -1.22
HMGN1P16-201ENST00000508308 LGR5O75473 907 aa7.43□□□□□ -1.22
HMGN1P16-201ENST00000508308 PARNO95453 639 aaKnown RBP7.43□□□□□ -1.22
HMGN1P16-201ENST00000508308 ITGB5P18084 799 aa7.43□□□□□ -1.22
HMGN1P16-201ENST00000508308 RXRAP19793 462 aa7.43□□□□□ -1.22
HMGN1P16-201ENST00000508308 SMARCA1P28370 1054 aa7.43□□□□□ -1.22
HMGN1P16-201ENST00000508308 THPOP40225 353 aa7.43□□□□□ -1.22
HMGN1P16-201ENST00000508308 KCNJ6P48051 423 aa7.43□□□□□ -1.22
HMGN1P16-201ENST00000508308 ERVK-21P61565 698 aa7.43□□□□□ -1.22
HMGN1P16-201ENST00000508308 HTRA4P83105 476 aaPredicted RBP7.43□□□□□ -1.22
HMGN1P16-201ENST00000508308 NECTIN1Q15223 517 aa7.43□□□□□ -1.22
HMGN1P16-201ENST00000508308 PLEKHG4Q58EX7 1191 aa7.43□□□□□ -1.22
HMGN1P16-201ENST00000508308 PCNX4Q63HM2 1172 aa7.43□□□□□ -1.22
HMGN1P16-201ENST00000508308 FAM117BQ6P1L5 589 aa7.43□□□□□ -1.22
HMGN1P16-201ENST00000508308 METTL7BQ6UX53 244 aa7.43□□□□□ -1.22
HMGN1P16-201ENST00000508308 RAB11FIP4Q86YS3 637 aa7.43□□□□□ -1.22
HMGN1P16-201ENST00000508308 DBF4BQ8NFT6 615 aa7.43□□□□□ -1.22
HMGN1P16-201ENST00000508308 GDPD5Q8WTR4 605 aa7.43□□□□□ -1.22
HMGN1P16-201ENST00000508308 UHRF1Q96T88 793 aaPredicted RBP7.43□□□□□ -1.22
HMGN1P16-201ENST00000508308 RAD9AQ99638 391 aa7.43□□□□□ -1.22
HMGN1P16-201ENST00000508308 SUGCTQ9HAC7 445 aa7.43□□□□□ -1.22
HMGN1P16-201ENST00000508308 MLXIPQ9HAP2 919 aa7.43□□□□□ -1.22
HMGN1P16-201ENST00000508308 SETD4Q9NVD3 440 aa7.43□□□□□ -1.22
HMGN1P16-201ENST00000508308 RAPGEFL1Q9UHV5 662 aa7.43□□□□□ -1.22
HMGN1P16-201ENST00000508308 LHX6Q9UPM6 363 aa7.43□□□□□ -1.22
HMGN1P16-201ENST00000508308 KAT6AQ92794 2004 aa7.42□□□□□ -1.22
HMGN1P16-201ENST00000508308 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.42□□□□□ -1.22
HMGN1P16-201ENST00000508308 GSTTP1A0A1W2PQM5 241 aa7.42□□□□□ -1.22
HMGN1P16-201ENST00000508308 ERICH2A1L162 156 aa7.42□□□□□ -1.22
HMGN1P16-201ENST00000508308 C17orf102A2RUQ5 167 aa7.42□□□□□ -1.22
HMGN1P16-201ENST00000508308 RSPH10B2B2RC85 870 aa7.42□□□□□ -1.22
HMGN1P16-201ENST00000508308 KIF28PB7ZC32 967 aa7.42□□□□□ -1.22
HMGN1P16-201ENST00000508308 FIBPO43427 364 aa7.42□□□□□ -1.22
HMGN1P16-201ENST00000508308 STAM2O75886 525 aa7.42□□□□□ -1.22
HMGN1P16-201ENST00000508308 DDAH1O94760 285 aa7.42□□□□□ -1.22
HMGN1P16-201ENST00000508308 RSPH10BP0C881 870 aa7.42□□□□□ -1.22
HMGN1P16-201ENST00000508308 KCNA2P16389 499 aa7.42□□□□□ -1.22
HMGN1P16-201ENST00000508308 LIFRP42702 1097 aa7.42□□□□□ -1.22
HMGN1P16-201ENST00000508308 TRAF1Q13077 416 aa7.42□□□□□ -1.22
HMGN1P16-201ENST00000508308 IKBKEQ14164 716 aa7.42□□□□□ -1.22
HMGN1P16-201ENST00000508308 SART3Q15020 963 aaKnown RBP7.42□□□□□ -1.22
HMGN1P16-201ENST00000508308 CREB3L3Q68CJ9 461 aa7.42□□□□□ -1.22
HMGN1P16-201ENST00000508308 LMBR1Q8WVP7 490 aa7.42□□□□□ -1.22
HMGN1P16-201ENST00000508308 ATP6V0A1Q93050 837 aa7.42□□□□□ -1.22
HMGN1P16-201ENST00000508308 RRP36Q96EU6 259 aaKnown RBP7.42□□□□□ -1.22
HMGN1P16-201ENST00000508308 SENP7Q9BQF6 1050 aa7.42□□□□□ -1.22
HMGN1P16-201ENST00000508308 C17orf80Q9BSJ5 609 aa7.42□□□□□ -1.22
HMGN1P16-201ENST00000508308 ESYT1Q9BSJ8 1104 aa7.42□□□□□ -1.22
HMGN1P16-201ENST00000508308 MTA3Q9BTC8 594 aa7.42□□□□□ -1.22
HMGN1P16-201ENST00000508308 ZBED2Q9BTP6 218 aa7.42□□□□□ -1.22
HMGN1P16-201ENST00000508308 USP26Q9BXU7 913 aa7.42□□□□□ -1.22
HMGN1P16-201ENST00000508308 LRRC2Q9BYS8 371 aa7.42□□□□□ -1.22
HMGN1P16-201ENST00000508308 MTUS1Q9ULD2 1270 aa7.42□□□□□ -1.22
HMGN1P16-201ENST00000508308 ATG2AQ2TAZ0 1938 aa7.42□□□□□ -1.22
HMGN1P16-201ENST00000508308 COL4A6Q14031 1691 aa7.41□□□□□ -1.22
HMGN1P16-201ENST00000508308 GTPBP6O43824 516 aaPredicted RBP7.41□□□□□ -1.22
HMGN1P16-201ENST00000508308 CHRNA1P02708 482 aa7.41□□□□□ -1.22
HMGN1P16-201ENST00000508308 CTSHP09668 335 aa7.41□□□□□ -1.22
HMGN1P16-201ENST00000508308 NUDT7P0C024 238 aa7.41□□□□□ -1.22
HMGN1P16-201ENST00000508308 LINC00271P0C7V0 271 aa7.41□□□□□ -1.22
HMGN1P16-201ENST00000508308 MCM5P33992 734 aa7.41□□□□□ -1.22
HMGN1P16-201ENST00000508308 SP4Q02446 784 aa7.41□□□□□ -1.22
HMGN1P16-201ENST00000508308 FUT2Q10981 343 aa7.41□□□□□ -1.22
HMGN1P16-201ENST00000508308 PDAP1Q13442 181 aaKnown RBP7.41□□□□□ -1.22
HMGN1P16-201ENST00000508308 NEDD9Q14511 834 aa7.41□□□□□ -1.22
HMGN1P16-201ENST00000508308 UBE2SQ16763 222 aa7.41□□□□□ -1.22
HMGN1P16-201ENST00000508308 GNPTABQ3T906 1256 aa7.41□□□□□ -1.22
HMGN1P16-201ENST00000508308 FAM26DQ5JW98 314 aa7.41□□□□□ -1.22
HMGN1P16-201ENST00000508308 MARCH8Q5T0T0 291 aa7.41□□□□□ -1.22
HMGN1P16-201ENST00000508308 UTP14CQ5TAP6 766 aaKnown RBP7.41□□□□□ -1.22
HMGN1P16-201ENST00000508308 TYW1BQ6NUM6 668 aa7.41□□□□□ -1.22
HMGN1P16-201ENST00000508308 XRRA1Q6P2D8 792 aa7.41□□□□□ -1.22
HMGN1P16-201ENST00000508308 RUFY4Q6ZNE9 571 aa7.41□□□□□ -1.22
HMGN1P16-201ENST00000508308 TMTC3Q6ZXV5 915 aa7.41□□□□□ -1.22
HMGN1P16-201ENST00000508308 CTCFLQ8NI51 663 aaPredicted RBP7.41□□□□□ -1.22
HMGN1P16-201ENST00000508308 ZBTB10Q96DT7 871 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms