RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 LIG3P49916 1009 aa8.36□□□□□ -1.07
PDGFRA-206ENST00000508170 GPR85P60893 370 aa8.36□□□□□ -1.07
PDGFRA-206ENST00000508170 AP2B1P63010 937 aa8.36□□□□□ -1.07
PDGFRA-206ENST00000508170 ICA1Q05084 483 aa8.36□□□□□ -1.07
PDGFRA-206ENST00000508170 KLHL30Q0D2K2 578 aa8.36□□□□□ -1.07
PDGFRA-206ENST00000508170 GRM2Q14416 872 aa8.36□□□□□ -1.07
PDGFRA-206ENST00000508170 BECN1Q14457 450 aa8.36□□□□□ -1.07
PDGFRA-206ENST00000508170 CAVIN4Q5BKX8 364 aa8.36□□□□□ -1.07
PDGFRA-206ENST00000508170 RAB12Q6IQ22 244 aa8.36□□□□□ -1.07
PDGFRA-206ENST00000508170 SHQ1Q6PI26 577 aaKnown RBP8.36□□□□□ -1.07
PDGFRA-206ENST00000508170 GK5Q6ZS86 529 aa8.36□□□□□ -1.07
PDGFRA-206ENST00000508170 AVL9Q8NBF6 648 aa8.36□□□□□ -1.07
PDGFRA-206ENST00000508170 GOT1L1Q8NHS2 421 aaPredicted RBP8.36□□□□□ -1.07
PDGFRA-206ENST00000508170 ZDHHC16Q969W1 377 aa8.36□□□□□ -1.07
PDGFRA-206ENST00000508170 ARHGAP9Q9BRR9 750 aa8.36□□□□□ -1.07
PDGFRA-206ENST00000508170 FAM204AQ9H8W3 233 aa8.36□□□□□ -1.07
PDGFRA-206ENST00000508170 ABCB6Q9NP58 842 aa8.36□□□□□ -1.07
PDGFRA-206ENST00000508170 V9GYY5 206 aaPredicted RBP8.36□□□□□ -1.07
PDGFRA-206ENST00000508170 PRDM2Q13029 1718 aa8.36□□□□□ -1.07
PDGFRA-206ENST00000508170 ADRB2P07550 413 aa8.35□□□□□ -1.07
PDGFRA-206ENST00000508170 RLBP1P12271 317 aa8.35□□□□□ -1.07
PDGFRA-206ENST00000508170 FXR2P51116 673 aaKnown RBP eCLIP8.35□□□□□ -1.07
PDGFRA-206ENST00000508170 NR1H2P55055 460 aa8.35□□□□□ -1.07
PDGFRA-206ENST00000508170 KRT32Q14532 448 aa8.35□□□□□ -1.07
PDGFRA-206ENST00000508170 KIAA0753Q2KHM9 967 aa8.35□□□□□ -1.07
PDGFRA-206ENST00000508170 SUN5Q8TC36 379 aa8.35□□□□□ -1.07
PDGFRA-206ENST00000508170 BTN2A2Q8WVV5 523 aa8.35□□□□□ -1.07
PDGFRA-206ENST00000508170 CTNNBL1Q8WYA6 563 aaPredicted RBP8.35□□□□□ -1.07
PDGFRA-206ENST00000508170 RABGGTAQ92696 567 aa8.35□□□□□ -1.07
PDGFRA-206ENST00000508170 CHFRQ96EP1 664 aa8.35□□□□□ -1.07
PDGFRA-206ENST00000508170 FAXDC2Q96IV6 333 aa8.35□□□□□ -1.07
PDGFRA-206ENST00000508170 PDCL3Q9H2J4 239 aa8.35□□□□□ -1.07
PDGFRA-206ENST00000508170 VPS37BQ9H9H4 285 aa8.35□□□□□ -1.07
PDGFRA-206ENST00000508170 SPON1Q9HCB6 807 aa8.35□□□□□ -1.07
PDGFRA-206ENST00000508170 SEPT10Q9P0V9 454 aa8.35□□□□□ -1.07
PDGFRA-206ENST00000508170 GRHPRQ9UBQ7 328 aa8.35□□□□□ -1.07
PDGFRA-206ENST00000508170 NOSIPQ9Y314 301 aaKnown RBP8.35□□□□□ -1.07
PDGFRA-206ENST00000508170 PAXBP1Q9Y5B6 917 aa8.35□□□□□ -1.07
PDGFRA-206ENST00000508170 TMEM94Q12767 1356 aa8.35□□□□□ -1.07
PDGFRA-206ENST00000508170 HRGP04196 525 aa8.35□□□□□ -1.07
PDGFRA-206ENST00000508170 JMJD7P0C870 316 aa8.35□□□□□ -1.07
PDGFRA-206ENST00000508170 TNFSF4P23510 183 aa8.35□□□□□ -1.07
PDGFRA-206ENST00000508170 GPR139Q6DWJ6 353 aa8.35□□□□□ -1.07
PDGFRA-206ENST00000508170 TTC6Q86TZ1 520 aa8.35□□□□□ -1.07
PDGFRA-206ENST00000508170 REM2Q8IYK8 340 aaPredicted RBP8.35□□□□□ -1.07
PDGFRA-206ENST00000508170 RBBP8NLQ8NC74 664 aaPredicted RBP8.35□□□□□ -1.07
PDGFRA-206ENST00000508170 OR52K2Q8NGK3 314 aa8.35□□□□□ -1.07
PDGFRA-206ENST00000508170 RMDN2Q96LZ7 410 aa8.35□□□□□ -1.07
PDGFRA-206ENST00000508170 RBM14Q96PK6 669 aaKnown RBP8.35□□□□□ -1.07
PDGFRA-206ENST00000508170 TMEM120AQ9BXJ8 343 aa8.35□□□□□ -1.07
PDGFRA-206ENST00000508170 LRRC3Q9BY71 257 aa8.35□□□□□ -1.07
PDGFRA-206ENST00000508170 BHMT2Q9H2M3 363 aa8.35□□□□□ -1.07
PDGFRA-206ENST00000508170 GHITMQ9H3K2 345 aa8.35□□□□□ -1.07
PDGFRA-206ENST00000508170 ZNF277Q9NRM2 450 aaPredicted RBP8.35□□□□□ -1.07
PDGFRA-206ENST00000508170 KRT82Q9NSB4 513 aa8.35□□□□□ -1.07
PDGFRA-206ENST00000508170 CUX1P39880 1505 aa8.35□□□□□ -1.07
PDGFRA-206ENST00000508170 ARPC4-TTLL3A0A0A6YYG9 625 aa8.34□□□□□ -1.07
PDGFRA-206ENST00000508170 KIF2AO00139 706 aaPredicted RBP8.34□□□□□ -1.07
PDGFRA-206ENST00000508170 FSCN2O14926 492 aa8.34□□□□□ -1.07
PDGFRA-206ENST00000508170 GADD45BO75293 160 aaPredicted RBP8.34□□□□□ -1.07
PDGFRA-206ENST00000508170 PPFIA2O75334 1257 aa8.34□□□□□ -1.07
PDGFRA-206ENST00000508170 USP1O94782 785 aa8.34□□□□□ -1.07
PDGFRA-206ENST00000508170 POTEIP0CG38 1075 aa8.34□□□□□ -1.07
PDGFRA-206ENST00000508170 PPARDQ03181 441 aa8.34□□□□□ -1.07
PDGFRA-206ENST00000508170 SP140Q13342 867 aa8.34□□□□□ -1.07
PDGFRA-206ENST00000508170 KLF1Q13351 362 aaPredicted RBP8.34□□□□□ -1.07
PDGFRA-206ENST00000508170 PRKG1Q13976 671 aa8.34□□□□□ -1.07
PDGFRA-206ENST00000508170 MAJINQ3KP22 176 aa8.34□□□□□ -1.07
PDGFRA-206ENST00000508170 AP1ARQ63HQ0 302 aa8.34□□□□□ -1.07
PDGFRA-206ENST00000508170 FBXO30Q8TB52 745 aa8.34□□□□□ -1.07
PDGFRA-206ENST00000508170 MFSD14AQ96MC6 490 aa8.34□□□□□ -1.07
PDGFRA-206ENST00000508170 ARHGAP39Q9C0H5 1083 aa8.34□□□□□ -1.07
PDGFRA-206ENST00000508170 ARHGEF4Q9NR80 690 aa8.34□□□□□ -1.07
PDGFRA-206ENST00000508170 HPCAL4Q9UM19 191 aa8.34□□□□□ -1.07
PDGFRA-206ENST00000508170 KIF16BQ96L93 1317 aa8.34□□□□□ -1.07
PDGFRA-206ENST00000508170 BRD4O60885 1362 aaPredicted RBP8.34□□□□□ -1.07
PDGFRA-206ENST00000508170 CFTRP13569 1480 aa8.34□□□□□ -1.07
PDGFRA-206ENST00000508170 A8MVJ9 347 aa8.34□□□□□ -1.07
PDGFRA-206ENST00000508170 NCK2O43639 380 aa8.34□□□□□ -1.07
PDGFRA-206ENST00000508170 PCDHGA12O60330 932 aa8.34□□□□□ -1.07
PDGFRA-206ENST00000508170 URI1O94763 535 aaPredicted RBP8.34□□□□□ -1.07
PDGFRA-206ENST00000508170 PCP11498 1178 aaKnown RBP8.34□□□□□ -1.07
PDGFRA-206ENST00000508170 GNAT2P19087 354 aa8.34□□□□□ -1.07
PDGFRA-206ENST00000508170 KIF11P52732 1056 aa8.34□□□□□ -1.07
PDGFRA-206ENST00000508170 KCNB1Q14721 858 aa8.34□□□□□ -1.07
PDGFRA-206ENST00000508170 FILIP1LQ4L180 1135 aa8.34□□□□□ -1.07
PDGFRA-206ENST00000508170 HAUS3Q68CZ6 603 aa8.34□□□□□ -1.07
PDGFRA-206ENST00000508170 KRT74Q7RTS7 529 aa8.34□□□□□ -1.07
PDGFRA-206ENST00000508170 OVCH2Q7RTZ1 564 aa8.34□□□□□ -1.07
PDGFRA-206ENST00000508170 CCDC186Q7Z3E2 898 aa8.34□□□□□ -1.07
PDGFRA-206ENST00000508170 ZBTB33Q86T24 672 aa8.34□□□□□ -1.07
PDGFRA-206ENST00000508170 PPFIBP1Q86W92 1011 aa8.34□□□□□ -1.07
PDGFRA-206ENST00000508170 DENND1AQ8TEH3 1009 aa8.34□□□□□ -1.07
PDGFRA-206ENST00000508170 DIS3LQ8TF46 1054 aaKnown RBP8.34□□□□□ -1.07
PDGFRA-206ENST00000508170 SHC3Q92529 594 aa8.34□□□□□ -1.07
PDGFRA-206ENST00000508170 TTPALQ9BTX7 342 aa8.34□□□□□ -1.07
PDGFRA-206ENST00000508170 MAK16Q9BXY0 300 aaKnown RBP8.34□□□□□ -1.07
PDGFRA-206ENST00000508170 LIN28AQ9H9Z2 209 aaKnown RBP8.34□□□□□ -1.07
PDGFRA-206ENST00000508170 TRAK1Q9UPV9 953 aa8.34□□□□□ -1.07
PDGFRA-206ENST00000508170 PCDHGA9Q9Y5G4 932 aaKnown RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms