RNA–Protein interactions for RNA: ENST00000504531.2

CASC9-201, Transcript of cancer susceptibility 9, humanhuman

TSL 1 (best) BASIC

Gene CASC9, Length 1,164 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC9-201ENST00000504531 PPP2R2CQ9Y2T4 447 aa9.9□□□□□ -0.82
CASC9-201ENST00000504531 MYO3BQ8WXR4 1341 aa9.89□□□□□ -0.83
CASC9-201ENST00000504531 RGPD3A6NKT7 1758 aaPredicted RBP9.89□□□□□ -0.83
CASC9-201ENST00000504531 RGPD4Q7Z3J3 1758 aa9.89□□□□□ -0.83
CASC9-201ENST00000504531 A0A087WWV3 80 aa9.89□□□□□ -0.83
CASC9-201ENST00000504531 GPR75-ASB3A0A0A6YYF3 556 aa9.89□□□□□ -0.83
CASC9-201ENST00000504531 A0A1W2PQC6 194 aa9.89□□□□□ -0.83
CASC9-201ENST00000504531 TSPY2A6NKD2 308 aa9.89□□□□□ -0.83
CASC9-201ENST00000504531 UBE2Q2LH0YL09 131 aa9.89□□□□□ -0.83
CASC9-201ENST00000504531 BBOX1O75936 387 aa9.89□□□□□ -0.83
CASC9-201ENST00000504531 IL1R1P14778 569 aa9.89□□□□□ -0.83
CASC9-201ENST00000504531 EPB42P16452 691 aa9.89□□□□□ -0.83
CASC9-201ENST00000504531 GRIN1Q05586 938 aa9.89□□□□□ -0.83
CASC9-201ENST00000504531 FMR1Q06787 632 aaKnown RBP eCLIP9.89□□□□□ -0.83
CASC9-201ENST00000504531 BMS1Q14692 1282 aaKnown RBP9.89□□□□□ -0.83
CASC9-201ENST00000504531 CRY2Q49AN0 593 aa9.89□□□□□ -0.83
CASC9-201ENST00000504531 C16orf46Q6P387 395 aa9.89□□□□□ -0.83
CASC9-201ENST00000504531 KRT25Q7Z3Z0 450 aa9.89□□□□□ -0.83
CASC9-201ENST00000504531 PPFIBP1Q86W92 1011 aa9.89□□□□□ -0.83
CASC9-201ENST00000504531 DZIP1Q86YF9 867 aaKnown RBP9.89□□□□□ -0.83
CASC9-201ENST00000504531 HOMER1Q86YM7 354 aa9.89□□□□□ -0.83
CASC9-201ENST00000504531 TEX2Q8IWB9 1127 aa9.89□□□□□ -0.83
CASC9-201ENST00000504531 FLAD1Q8NFF5 587 aa9.89□□□□□ -0.83
CASC9-201ENST00000504531 WHAMMQ8TF30 809 aa9.89□□□□□ -0.83
CASC9-201ENST00000504531 MED15Q96RN5 788 aa9.89□□□□□ -0.83
CASC9-201ENST00000504531 ZMYND12Q9H0C1 365 aa9.89□□□□□ -0.83
CASC9-201ENST00000504531 ARGLU1Q9NWB6 273 aaPredicted RBP9.89□□□□□ -0.83
CASC9-201ENST00000504531 TRMT1Q9NXH9 659 aaKnown RBP9.89□□□□□ -0.83
CASC9-201ENST00000504531 BARHL2Q9NY43 387 aa9.89□□□□□ -0.83
CASC9-201ENST00000504531 KLK14Q9P0G3 267 aa9.89□□□□□ -0.83
CASC9-201ENST00000504531 PRR12Q9ULL5 1215 aa9.89□□□□□ -0.83
CASC9-201ENST00000504531 KCNH4Q9UQ05 1017 aa9.89□□□□□ -0.83
CASC9-201ENST00000504531 COL4A1P02462 1669 aa9.89□□□□□ -0.83
CASC9-201ENST00000504531 TNRC6CQ9HCJ0 1690 aaKnown RBP9.89□□□□□ -0.83
CASC9-201ENST00000504531 SBF2Q86WG5 1849 aa9.89□□□□□ -0.83
CASC9-201ENST00000504531 TAF1LQ8IZX4 1826 aa9.89□□□□□ -0.83
CASC9-201ENST00000504531 SYNRGQ9UMZ2 1314 aa9.88□□□□□ -0.83
CASC9-201ENST00000504531 KLRG2A4D1S0 409 aaPredicted RBP9.88□□□□□ -0.83
CASC9-201ENST00000504531 FOXN1O15353 648 aa9.88□□□□□ -0.83
CASC9-201ENST00000504531 CCDC175P0C221 793 aa9.88□□□□□ -0.83
CASC9-201ENST00000504531 EEF1GP26641 437 aaKnown RBP9.88□□□□□ -0.83
CASC9-201ENST00000504531 GNA11P29992 359 aa9.88□□□□□ -0.83
CASC9-201ENST00000504531 HOXA10P31260 410 aaPredicted RBP9.88□□□□□ -0.83
CASC9-201ENST00000504531 SFSWAPQ12872 951 aaKnown RBP9.88□□□□□ -0.83
CASC9-201ENST00000504531 TRAPPC3LQ5T215 181 aa9.88□□□□□ -0.83
CASC9-201ENST00000504531 SYT10Q6XYQ8 523 aa9.88□□□□□ -0.83
CASC9-201ENST00000504531 DTHD1Q6ZMT9 781 aa9.88□□□□□ -0.83
CASC9-201ENST00000504531 ARHGAP27Q6ZUM4 889 aa9.88□□□□□ -0.83
CASC9-201ENST00000504531 RASGRP2Q7LDG7 609 aa9.88□□□□□ -0.83
CASC9-201ENST00000504531 ZNF444Q8N0Y2 327 aaPredicted RBP9.88□□□□□ -0.83
CASC9-201ENST00000504531 RETREG2Q8NC44 543 aa9.88□□□□□ -0.83
CASC9-201ENST00000504531 NEDD1Q8NHV4 660 aa9.88□□□□□ -0.83
CASC9-201ENST00000504531 DHX58Q96C10 678 aa9.88□□□□□ -0.83
CASC9-201ENST00000504531 DHTKD1Q96HY7 919 aaPredicted RBP9.88□□□□□ -0.83
CASC9-201ENST00000504531 EPSTI1Q96J88 318 aa9.88□□□□□ -0.83
CASC9-201ENST00000504531 MKNK1Q9BUB5 465 aa9.88□□□□□ -0.83
CASC9-201ENST00000504531 TTF2Q9UNY4 1162 aaKnown RBP9.88□□□□□ -0.83
CASC9-201ENST00000504531 BTAF1O14981 1849 aa9.88□□□□□ -0.83
CASC9-201ENST00000504531 PLIN4Q96Q06 1357 aa9.88□□□□□ -0.83
CASC9-201ENST00000504531 FAM205AQ6ZU69 1335 aa9.87□□□□□ -0.83
CASC9-201ENST00000504531 A0A087X0B3 334 aa9.87□□□□□ -0.83
CASC9-201ENST00000504531 VWA3AA6NCI4 1184 aa9.87□□□□□ -0.83
CASC9-201ENST00000504531 OIP5O43482 229 aa9.87□□□□□ -0.83
CASC9-201ENST00000504531 RHOBTB3O94955 611 aa9.87□□□□□ -0.83
CASC9-201ENST00000504531 ARHGEF15O94989 841 aa9.87□□□□□ -0.83
CASC9-201ENST00000504531 KIF20AO95235 890 aa9.87□□□□□ -0.83
CASC9-201ENST00000504531 ADH6P28332 368 aa9.87□□□□□ -0.83
CASC9-201ENST00000504531 PRDX5P30044 214 aa9.87□□□□□ -0.83
CASC9-201ENST00000504531 AMPD3Q01432 767 aa9.87□□□□□ -0.83
CASC9-201ENST00000504531 TFAP4Q01664 338 aa9.87□□□□□ -0.83
CASC9-201ENST00000504531 PAK1Q13153 545 aa9.87□□□□□ -0.83
CASC9-201ENST00000504531 STIM1Q13586 685 aa9.87□□□□□ -0.83
CASC9-201ENST00000504531 EARS2Q5JPH6 523 aaKnown RBP9.87□□□□□ -0.83
CASC9-201ENST00000504531 COX20Q5RI15 118 aa9.87□□□□□ -0.83
CASC9-201ENST00000504531 ZNF468Q5VIY5 522 aaPredicted RBP9.87□□□□□ -0.83
CASC9-201ENST00000504531 WWC2Q6AWC2 1192 aa9.87□□□□□ -0.83
CASC9-201ENST00000504531 ISM2Q6H9L7 571 aa9.87□□□□□ -0.83
CASC9-201ENST00000504531 CNNM4Q6P4Q7 775 aa9.87□□□□□ -0.83
CASC9-201ENST00000504531 SLCO4C1Q6ZQN7 724 aa9.87□□□□□ -0.83
CASC9-201ENST00000504531 C16orf86Q6ZW13 317 aa9.87□□□□□ -0.83
CASC9-201ENST00000504531 USP49Q70CQ1 688 aa9.87□□□□□ -0.83
CASC9-201ENST00000504531 UBXN4Q92575 508 aa9.87□□□□□ -0.83
CASC9-201ENST00000504531 CCDC47Q96A33 483 aaKnown RBP9.87□□□□□ -0.83
CASC9-201ENST00000504531 CRAMP1Q96RY5 1269 aa9.87□□□□□ -0.83
CASC9-201ENST00000504531 THAP9Q9H5L6 903 aa9.87□□□□□ -0.83
CASC9-201ENST00000504531 EFCC1Q9HA90 598 aa9.87□□□□□ -0.83
CASC9-201ENST00000504531 DISC1Q9NRI5 854 aa9.87□□□□□ -0.83
CASC9-201ENST00000504531 IL17RBQ9NRM6 502 aa9.87□□□□□ -0.83
CASC9-201ENST00000504531 SAMSN1Q9NSI8 373 aaKnown RBP9.87□□□□□ -0.83
CASC9-201ENST00000504531 KBTBD4Q9NVX7 518 aa9.87□□□□□ -0.83
CASC9-201ENST00000504531 MCM9Q9NXL9 1143 aa9.87□□□□□ -0.83
CASC9-201ENST00000504531 MAD2L2Q9UI95 211 aa9.87□□□□□ -0.83
CASC9-201ENST00000504531 HCN2Q9UL51 889 aa9.87□□□□□ -0.83
CASC9-201ENST00000504531 LRFN2Q9ULH4 789 aa9.87□□□□□ -0.83
CASC9-201ENST00000504531 BCS1LQ9Y276 419 aa9.87□□□□□ -0.83
CASC9-201ENST00000504531 GAKO14976 1311 aa9.86□□□□□ -0.83
CASC9-201ENST00000504531 ABCB11O95342 1321 aa9.86□□□□□ -0.83
CASC9-201ENST00000504531 CEP350Q5VT06 3117 aa9.86□□□□□ -0.83
CASC9-201ENST00000504531 CCDC194A0A1B0GVG4 234 aa9.86□□□□□ -0.83
CASC9-201ENST00000504531 TMEM232C9JQI7 657 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms