RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 KRT18P05783 430 aaKnown RBP23.7■■□□□ 1.38
UBE2D3-216ENST00000503742 GTF2F1P35269 517 aaKnown RBP eCLIP23.7■■□□□ 1.387e-7■■■□□ 15.7
UBE2D3-216ENST00000503742 HMGCS2P54868 508 aa23.7■■□□□ 1.38
UBE2D3-216ENST00000503742 RPS6P62753 249 aaKnown RBP23.7■■□□□ 1.38
UBE2D3-216ENST00000503742 PCNX4Q63HM2 1172 aa23.7■■□□□ 1.38
UBE2D3-216ENST00000503742 DYDC2Q96IM9 177 aa23.7■■□□□ 1.38
UBE2D3-216ENST00000503742 TSG101Q99816 390 aa23.7■■□□□ 1.38
UBE2D3-216ENST00000503742 TEKT3Q9BXF9 490 aa23.7■■□□□ 1.38
UBE2D3-216ENST00000503742 UNC45AQ9H3U1 944 aa23.7■■□□□ 1.38
UBE2D3-216ENST00000503742 HOMER2Q9NSB8 354 aa23.7■■□□□ 1.38
UBE2D3-216ENST00000503742 PPP2R2CQ9Y2T4 447 aa23.7■■□□□ 1.38
UBE2D3-216ENST00000503742 CTDP1Q9Y5B0 961 aaPredicted RBP23.7■■□□□ 1.38
UBE2D3-216ENST00000503742 UBIAD1Q9Y5Z9 338 aa23.7■■□□□ 1.38
UBE2D3-216ENST00000503742 COL11A1P12107 1806 aaPredicted RBP23.7■■□□□ 1.38
UBE2D3-216ENST00000503742 ZSCAN12O43309 604 aa23.69■■□□□ 1.38
UBE2D3-216ENST00000503742 MTIF2P46199 727 aaKnown RBP23.69■■□□□ 1.38
UBE2D3-216ENST00000503742 RAD51AP2Q09MP3 1159 aa23.69■■□□□ 1.38
UBE2D3-216ENST00000503742 CTTNQ14247 550 aaKnown RBP23.69■■□□□ 1.38
UBE2D3-216ENST00000503742 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.69■■□□□ 1.38
UBE2D3-216ENST00000503742 SCFD1Q8WVM8 642 aa23.69■■□□□ 1.38
UBE2D3-216ENST00000503742 TRERF1Q96PN7 1200 aa23.69■■□□□ 1.38
UBE2D3-216ENST00000503742 REEP2Q9BRK0 252 aa23.69■■□□□ 1.38
UBE2D3-216ENST00000503742 BHMT2Q9H2M3 363 aa23.69■■□□□ 1.38
UBE2D3-216ENST00000503742 TBC1D7Q9P0N9 293 aa23.69■■□□□ 1.38
UBE2D3-216ENST00000503742 RIOK3O14730 519 aaKnown RBP23.69■■□□□ 1.38
UBE2D3-216ENST00000503742 NKRFO15226 690 aaKnown RBP eCLIP23.69■■□□□ 1.38
UBE2D3-216ENST00000503742 CHMP2AO43633 222 aa23.69■■□□□ 1.38
UBE2D3-216ENST00000503742 TUBB4AP04350 444 aa23.69■■□□□ 1.38
UBE2D3-216ENST00000503742 DSG3P32926 999 aa23.69■■□□□ 1.38
UBE2D3-216ENST00000503742 EPHA7Q15375 998 aa23.69■■□□□ 1.38
UBE2D3-216ENST00000503742 GLIPR1L2Q4G1C9 344 aa23.69■■□□□ 1.38
UBE2D3-216ENST00000503742 TOGARAM2Q6ZUX3 1019 aa23.69■■□□□ 1.38
UBE2D3-216ENST00000503742 TAAR1Q96RJ0 339 aa23.69■■□□□ 1.38
UBE2D3-216ENST00000503742 NOC4LQ9BVI4 516 aaKnown RBP23.69■■□□□ 1.38
UBE2D3-216ENST00000503742 KCNH7Q9NS40 1196 aa23.69■■□□□ 1.38
UBE2D3-216ENST00000503742 USP2O75604 605 aaPredicted RBP23.68■■□□□ 1.38
UBE2D3-216ENST00000503742 OAZ1P54368 228 aa23.68■■□□□ 1.38
UBE2D3-216ENST00000503742 MRPS9P82933 396 aaKnown RBP23.68■■□□□ 1.38
UBE2D3-216ENST00000503742 RUSC1Q9BVN2 902 aa23.68■■□□□ 1.38
UBE2D3-216ENST00000503742 ABHD10Q9NUJ1 306 aa23.68■■□□□ 1.38
UBE2D3-216ENST00000503742 AFG3L2Q9Y4W6 797 aa23.68■■□□□ 1.38
UBE2D3-216ENST00000503742 KIF20AO95235 890 aa23.67■■□□□ 1.38
UBE2D3-216ENST00000503742 TKFCQ3LXA3 575 aa23.67■■□□□ 1.38
UBE2D3-216ENST00000503742 TPH2Q8IWU9 490 aa23.67■■□□□ 1.38
UBE2D3-216ENST00000503742 KCTD10Q9H3F6 313 aa23.67■■□□□ 1.38
UBE2D3-216ENST00000503742 JADE2Q9NQC1 790 aa23.67■■□□□ 1.38
UBE2D3-216ENST00000503742 ADARB2Q9NS39 739 aaKnown RBP23.67■■□□□ 1.38
UBE2D3-216ENST00000503742 SOWAHDA6NJG2 315 aa23.67■■□□□ 1.38
UBE2D3-216ENST00000503742 PES1O00541 588 aaKnown RBP23.67■■□□□ 1.38
UBE2D3-216ENST00000503742 FKBP3Q00688 224 aaKnown RBP23.67■■□□□ 1.38
UBE2D3-216ENST00000503742 TBC1D8BQ0IIM8 1120 aa23.67■■□□□ 1.38
UBE2D3-216ENST00000503742 RINT1Q6NUQ1 792 aa23.67■■□□□ 1.38
UBE2D3-216ENST00000503742 RNF207Q6ZRF8 634 aa23.67■■□□□ 1.38
UBE2D3-216ENST00000503742 ERGIC2Q96RQ1 377 aa23.67■■□□□ 1.38
UBE2D3-216ENST00000503742 RIPK3Q9Y572 518 aa23.67■■□□□ 1.38
UBE2D3-216ENST00000503742 DHX15O43143 795 aaKnown RBP23.66■■□□□ 1.38
UBE2D3-216ENST00000503742 COG2Q14746 738 aa23.66■■□□□ 1.38
UBE2D3-216ENST00000503742 MTF1Q14872 753 aa23.66■■□□□ 1.38
UBE2D3-216ENST00000503742 PGM5Q15124 567 aa23.66■■□□□ 1.38
UBE2D3-216ENST00000503742 RAD9BQ6WBX8 426 aa23.66■■□□□ 1.38
UBE2D3-216ENST00000503742 CATSPERGQ6ZRH7 1159 aa23.66■■□□□ 1.38
UBE2D3-216ENST00000503742 EPM2AIP1Q7L775 607 aaPredicted RBP23.66■■□□□ 1.38
UBE2D3-216ENST00000503742 ZC3H3Q8IXZ2 948 aaKnown RBP23.66■■□□□ 1.38
UBE2D3-216ENST00000503742 PIGOQ8TEQ8 1089 aa23.66■■□□□ 1.38
UBE2D3-216ENST00000503742 TTYH3Q9C0H2 523 aa23.66■■□□□ 1.38
UBE2D3-216ENST00000503742 WDR90Q96KV7 1748 aa23.66■■□□□ 1.38
UBE2D3-216ENST00000503742 PAPPA2Q9BXP8 1791 aa23.65■■□□□ 1.38
UBE2D3-216ENST00000503742 TTC26A0AVF1 554 aa23.65■■□□□ 1.38
UBE2D3-216ENST00000503742 KRT9P35527 623 aa23.65■■□□□ 1.38
UBE2D3-216ENST00000503742 ZNF592Q92610 1267 aa23.65■■□□□ 1.38
UBE2D3-216ENST00000503742 AGO4Q9HCK5 861 aaKnown RBP23.65■■□□□ 1.38
UBE2D3-216ENST00000503742 RNF146Q9NTX7 359 aa23.65■■□□□ 1.38
UBE2D3-216ENST00000503742 WRAP73Q9P2S5 460 aaPredicted RBP23.65■■□□□ 1.38
UBE2D3-216ENST00000503742 ZNF214Q9UL59 606 aaPredicted RBP23.65■■□□□ 1.38
UBE2D3-216ENST00000503742 CAPN11Q9UMQ6 739 aa23.65■■□□□ 1.38
UBE2D3-216ENST00000503742 RASSF10A6NK89 507 aa23.65■■□□□ 1.38
UBE2D3-216ENST00000503742 DYNC1I1O14576 645 aa23.65■■□□□ 1.38
UBE2D3-216ENST00000503742 MAN2A1Q16706 1144 aa23.65■■□□□ 1.38
UBE2D3-216ENST00000503742 VWA3BQ502W6 1294 aa23.65■■□□□ 1.38
UBE2D3-216ENST00000503742 SH3D19Q5HYK7 790 aa23.65■■□□□ 1.38
UBE2D3-216ENST00000503742 TRIM65Q6PJ69 517 aa23.65■■□□□ 1.38
UBE2D3-216ENST00000503742 C1orf186Q6ZWK4 172 aa23.65■■□□□ 1.38
UBE2D3-216ENST00000503742 SFR1Q86XK3 245 aa23.65■■□□□ 1.38
UBE2D3-216ENST00000503742 KIF18AQ8NI77 898 aa23.65■■□□□ 1.38
UBE2D3-216ENST00000503742 NEK9Q8TD19 979 aa23.65■■□□□ 1.38
UBE2D3-216ENST00000503742 NACC1Q96RE7 527 aa23.65■■□□□ 1.38
UBE2D3-216ENST00000503742 NUP58Q9BVL2 599 aa23.65■■□□□ 1.38
UBE2D3-216ENST00000503742 PXMP2Q9NR77 195 aa23.65■■□□□ 1.38
UBE2D3-216ENST00000503742 RNF181Q9P0P0 153 aa23.65■■□□□ 1.38
UBE2D3-216ENST00000503742 GOLGA6L9A6NEM1 432 aa23.64■■□□□ 1.38
UBE2D3-216ENST00000503742 ATP2A1O14983 1001 aa23.64■■□□□ 1.38
UBE2D3-216ENST00000503742 CASP5P51878 434 aa23.64■■□□□ 1.38
UBE2D3-216ENST00000503742 SYCP1Q15431 976 aa23.64■■□□□ 1.38
UBE2D3-216ENST00000503742 TMTC1Q8IUR5 882 aa23.64■■□□□ 1.38
UBE2D3-216ENST00000503742 RETREG2Q8NC44 543 aa23.64■■□□□ 1.38
UBE2D3-216ENST00000503742 CEP63Q96MT8 703 aa23.64■■□□□ 1.38
UBE2D3-216ENST00000503742 PDCD2LQ9BRP1 358 aa23.64■■□□□ 1.38
UBE2D3-216ENST00000503742 ZHX3Q9H4I2 956 aa23.64■■□□□ 1.38
UBE2D3-216ENST00000503742 TMOD4Q9NZQ9 345 aa23.64■■□□□ 1.38
UBE2D3-216ENST00000503742 LOXHD1Q8IVV2 1947 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms